RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 KBTBD6Q86V97 674 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 CERKQ8TCT0 537 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 BHLHE41Q9C0J9 482 aaPredicted RBP3.69□□□□□ -1.82
SYNE1-207ENST00000367255 PCDHB10Q9UN67 800 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 A0A0D9SG52 128 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 FAM240BA0A1B0GVZ2 78 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 NPIPA2E9PIF3 369 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 NPIPA5E9PKD4 350 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 NPIPA3F8WFD2 350 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 SLC7A4O43246 635 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 RBMS1P29558 406 aaKnown RBP3.69□□□□□ -1.82
SYNE1-207ENST00000367255 IST1P53990 364 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 TROAPQ12815 778 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 CATSPERGQ6ZRH7 1159 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 DCDC5Q6ZRR9 648 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 RFPL4BQ6ZWI9 263 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 LAPTM4BQ86VI4 370 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 DCP1BQ8IZD4 617 aaKnown RBP3.69□□□□□ -1.82
SYNE1-207ENST00000367255 IL17RDQ8NFM7 739 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 RSPRY1Q96DX4 576 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 DCUN1D1Q96GG9 259 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 SLC22A12Q96S37 553 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 C1QTNF7Q9BXJ2 289 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 NPIPA1Q9UND3 350 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 ORC1Q13415 861 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 DSG4Q86SJ6 1040 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 B3GNT7Q8NFL0 401 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 CHST12Q9NRB3 414 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 TRNAU1APQ9NX07 287 aaKnown RBP3.69□□□□□ -1.82
SYNE1-207ENST00000367255 ANXA5P08758 320 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 DHCR24Q15392 516 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 NOL9Q5SY16 702 aaKnown RBP3.69□□□□□ -1.82
SYNE1-207ENST00000367255 SLC51AQ86UW1 340 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 MYRFLQ96LU7 910 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 NUDT15Q9NV35 164 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 NKX2-5P52952 324 aaPredicted RBP3.68□□□□□ -1.82
SYNE1-207ENST00000367255 DLX5P56178 289 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 CHRNEQ04844 493 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 MAP4K2Q12851 820 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 RNF151Q2KHN1 245 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 ANKRD16Q6P6B7 361 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 RFX6Q8HWS3 928 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 CMBLQ96DG6 245 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 C8orf48Q96LL4 319 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 ELOVL4Q9GZR5 314 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 NUDT4Q9NZJ9 180 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 SRP68Q9UHB9 627 aaKnown RBP3.68□□□□□ -1.82
SYNE1-207ENST00000367255 SNX10Q9Y5X0 201 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 DPYSL4O14531 572 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 URODP06132 367 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 CYP4B1P13584 511 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 RPS9P46781 194 aaKnown RBP3.68□□□□□ -1.82
SYNE1-207ENST00000367255 TTLL4Q14679 1199 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 KCNK18Q7Z418 384 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 COMMD7Q86VX2 200 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 IGDCC4Q8TDY8 1250 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 TCTEX1D2Q8WW35 142 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 DOK1Q99704 481 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 BEX1Q9HBH7 125 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 MYOZ2Q9NPC6 264 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 ARIH2O95376 493 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 CLK3P49761 638 aaKnown RBP3.68□□□□□ -1.82
SYNE1-207ENST00000367255 ASAH1Q13510 395 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 UBXN11Q5T124 520 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 CENPLQ8N0S6 344 aaPredicted RBP3.68□□□□□ -1.82
SYNE1-207ENST00000367255 ZFP42Q96MM3 310 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 MOB1AQ9H8S9 216 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 CDKN2AIPQ9NXV6 580 aaPredicted RBP3.68□□□□□ -1.82
SYNE1-207ENST00000367255 SEC14L3Q9UDX4 400 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 PPT2Q9UMR5 302 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 HEY1Q9Y5J3 304 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 AUHQ13825 339 aaKnown RBP3.68□□□□□ -1.82
SYNE1-207ENST00000367255 SETMARQ53H47 684 aaPredicted RBP3.68□□□□□ -1.82
SYNE1-207ENST00000367255 MLIPQ5VWP3 458 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 CDCA2Q69YH5 1023 aaPredicted RBP3.68□□□□□ -1.82
SYNE1-207ENST00000367255 PGM2L1Q6PCE3 622 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 PCNPQ8WW12 178 aaKnown RBP3.68□□□□□ -1.82
SYNE1-207ENST00000367255 FTHL17Q9BXU8 183 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 REV1Q9UBZ9 1251 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 COQ4Q9Y3A0 265 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 A0A1B0GVG6 124 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 UMAD1C9J7I0 102 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 ITGA4P13612 1032 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 DGKGP49619 791 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 LIMK2P53671 638 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 ANKS6Q68DC2 871 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 RASGRP3Q8IV61 690 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 SHC3Q92529 594 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 MAN1C1Q9NR34 630 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 MARCOQ9UEW3 520 aaPredicted RBP3.68□□□□□ -1.82
SYNE1-207ENST00000367255 POFUT2Q9Y2G5 429 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 TMEM200CA6NKL6 621 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 CCRL2O00421 344 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 DSG3P32926 999 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 NPTX1Q15818 432 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 PPP1R26Q5T8A7 1209 aaPredicted RBP3.68□□□□□ -1.82
SYNE1-207ENST00000367255 BEST4Q8NFU0 473 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 CTRCQ99895 268 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 C1QTNF1Q9BXJ1 281 aa3.68□□□□□ -1.82
SYNE1-207ENST00000367255 HRO43593 1189 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms