RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.28□□□□□ -0.28
PRKN-205ENST00000366897 DLGAP4Q9Y2H0 992 aa13.28□□□□□ -0.28
PRKN-205ENST00000366897 CCL27Q9Y4X3 112 aa13.28□□□□□ -0.28
PRKN-205ENST00000366897 ANGPTL3Q9Y5C1 460 aa13.28□□□□□ -0.28
PRKN-205ENST00000366897 EFCAB9A8MZ26 197 aa13.27□□□□□ -0.28
PRKN-205ENST00000366897 HAS3O00219 553 aa13.27□□□□□ -0.28
PRKN-205ENST00000366897 GNRH1P01148 92 aa13.27□□□□□ -0.28
PRKN-205ENST00000366897 DNTTP04053 509 aa13.27□□□□□ -0.28
PRKN-205ENST00000366897 EIF2DP41214 584 aaKnown RBP13.27□□□□□ -0.28
PRKN-205ENST00000366897 RUNDC3AQ59EK9 446 aa13.27□□□□□ -0.28
PRKN-205ENST00000366897 SBSNQ6UWP8 590 aa13.27□□□□□ -0.28
PRKN-205ENST00000366897 ZNF467Q7Z7K2 595 aaPredicted RBP13.27□□□□□ -0.28
PRKN-205ENST00000366897 GPR149Q86SP6 731 aa13.27□□□□□ -0.28
PRKN-205ENST00000366897 LYSMD2Q8IV50 215 aa13.27□□□□□ -0.28
PRKN-205ENST00000366897 RGL4Q8IZJ4 473 aa13.27□□□□□ -0.28
PRKN-205ENST00000366897 RHOXF1Q8NHV9 184 aa13.27□□□□□ -0.28
PRKN-205ENST00000366897 LKAAEAR1Q8TD35 194 aa13.27□□□□□ -0.28
PRKN-205ENST00000366897 BOCQ9BWV1 1114 aa13.27□□□□□ -0.28
PRKN-205ENST00000366897 DUSP21Q9H596 190 aa13.27□□□□□ -0.28
PRKN-205ENST00000366897 CCSER2Q9H7U1 834 aa13.27□□□□□ -0.28
PRKN-205ENST00000366897 NECTIN3Q9NQS3 549 aa13.27□□□□□ -0.28
PRKN-205ENST00000366897 IL37Q9NZH6 218 aa13.27□□□□□ -0.28
PRKN-205ENST00000366897 PDP1Q9P0J1 537 aaPredicted RBP13.27□□□□□ -0.28
PRKN-205ENST00000366897 SPATA7Q9P0W8 599 aa13.27□□□□□ -0.28
PRKN-205ENST00000366897 ZNF490Q9ULM2 529 aaPredicted RBP13.27□□□□□ -0.28
PRKN-205ENST00000366897 NOD1Q9Y239 953 aa13.27□□□□□ -0.28
PRKN-205ENST00000366897 PRG3Q9Y2Y8 225 aaPredicted RBP13.27□□□□□ -0.28
PRKN-205ENST00000366897 LOC100506127A0A0U1RQW1 187 aa13.27□□□□□ -0.29
PRKN-205ENST00000366897 C2orf81A6NN90 581 aa13.27□□□□□ -0.29
PRKN-205ENST00000366897 SNPHO15079 494 aa13.27□□□□□ -0.29
PRKN-205ENST00000366897 SLC16A6O15403 523 aa13.27□□□□□ -0.29
PRKN-205ENST00000366897 FFAR2O15552 330 aa13.27□□□□□ -0.29
PRKN-205ENST00000366897 RGS10O43665 173 aa13.27□□□□□ -0.29
PRKN-205ENST00000366897 SSX4O60224 188 aa13.27□□□□□ -0.29
PRKN-205ENST00000366897 RECQL5O94762 991 aaPredicted RBP13.27□□□□□ -0.29
PRKN-205ENST00000366897 SCELO95171 688 aa13.27□□□□□ -0.29
PRKN-205ENST00000366897 ACVR2AP27037 513 aa13.27□□□□□ -0.29
PRKN-205ENST00000366897 HOXD9P28356 352 aaPredicted RBP13.27□□□□□ -0.29
PRKN-205ENST00000366897 RYKP34925 604 aa13.27□□□□□ -0.29
PRKN-205ENST00000366897 ACOX1Q15067 660 aa13.27□□□□□ -0.29
PRKN-205ENST00000366897 CPSF6Q16630 551 aaKnown RBP eCLIP13.27□□□□□ -0.29
PRKN-205ENST00000366897 ATP6V0D2Q8N8Y2 350 aa13.27□□□□□ -0.29
PRKN-205ENST00000366897 PROX1Q92786 737 aa13.27□□□□□ -0.29
PRKN-205ENST00000366897 CINPQ9BW66 212 aaPredicted RBP13.27□□□□□ -0.29
PRKN-205ENST00000366897 C1orf109Q9NX04 203 aa13.27□□□□□ -0.29
PRKN-205ENST00000366897 SIRT5Q9NXA8 310 aa13.27□□□□□ -0.29
PRKN-205ENST00000366897 SCN3BQ9NY72 215 aa13.27□□□□□ -0.29
PRKN-205ENST00000366897 SRRDQ9UH36 339 aa13.27□□□□□ -0.29
PRKN-205ENST00000366897 ERVK-11Q9UQG0 969 aa13.27□□□□□ -0.29
PRKN-205ENST00000366897 EIF3LQ9Y262 564 aaKnown RBP13.27□□□□□ -0.29
PRKN-205ENST00000366897 TPRKBQ9Y3C4 175 aa13.27□□□□□ -0.29
PRKN-205ENST00000366897 MYO16Q9Y6X6 1858 aa13.27□□□□□ -0.29
PRKN-205ENST00000366897 KRT87PA6NCN2 255 aa13.26□□□□□ -0.29
PRKN-205ENST00000366897 STX7O15400 261 aaKnown RBP13.26□□□□□ -0.29
PRKN-205ENST00000366897 TAPBPO15533 448 aa13.26□□□□□ -0.29
PRKN-205ENST00000366897 NBNO60934 754 aa13.26□□□□□ -0.29
PRKN-205ENST00000366897 VIPP01282 170 aa13.26□□□□□ -0.29
PRKN-205ENST00000366897 TACR1P25103 407 aa13.26□□□□□ -0.29
PRKN-205ENST00000366897 CREMQ03060 361 aa13.26□□□□□ -0.29
PRKN-205ENST00000366897 PRKCZQ05513 592 aa13.26□□□□□ -0.29
PRKN-205ENST00000366897 CXCL17Q6UXB2 119 aa13.26□□□□□ -0.29
PRKN-205ENST00000366897 NANOGNBQ7Z5D8 188 aa13.26□□□□□ -0.29
PRKN-205ENST00000366897 PLEKHH3Q7Z736 793 aa13.26□□□□□ -0.29
PRKN-205ENST00000366897 TTC29Q8NA56 475 aaPredicted RBP13.26□□□□□ -0.29
PRKN-205ENST00000366897 PYURFQ96I23 114 aa13.26□□□□□ -0.29
PRKN-205ENST00000366897 REXO5Q96IC2 774 aaKnown RBP13.26□□□□□ -0.29
PRKN-205ENST00000366897 EGLN2Q96KS0 407 aa13.26□□□□□ -0.29
PRKN-205ENST00000366897 GPRC5BQ9NZH0 403 aa13.26□□□□□ -0.29
PRKN-205ENST00000366897 PDE4DIPQ5VU43 2346 aa13.26□□□□□ -0.29
PRKN-205ENST00000366897 IGLV3-10A0A075B6K4 115 aa13.26□□□□□ -0.29
PRKN-205ENST00000366897 H0Y626 953 aa13.26□□□□□ -0.29
PRKN-205ENST00000366897 CBX4O00257 560 aa13.26□□□□□ -0.29
PRKN-205ENST00000366897 TRIM16O95361 564 aa13.26□□□□□ -0.29
PRKN-205ENST00000366897 CTPS1P17812 591 aa13.26□□□□□ -0.29
PRKN-205ENST00000366897 LPOP22079 712 aaPredicted RBP13.26□□□□□ -0.29
PRKN-205ENST00000366897 TGFBR2P37173 567 aa13.26□□□□□ -0.29
PRKN-205ENST00000366897 NUDT6P53370 316 aa13.26□□□□□ -0.29
PRKN-205ENST00000366897 TAF10Q12962 218 aa13.26□□□□□ -0.29
PRKN-205ENST00000366897 PARP15Q460N3 678 aa13.26□□□□□ -0.29
PRKN-205ENST00000366897 SYT6Q5T7P8 510 aaPredicted RBP13.26□□□□□ -0.29
PRKN-205ENST00000366897 AKAP14Q86UN6 197 aa13.26□□□□□ -0.29
PRKN-205ENST00000366897 ATG16L2Q8NAA4 619 aa13.26□□□□□ -0.29
PRKN-205ENST00000366897 FBXO32Q969P5 355 aa13.26□□□□□ -0.29
PRKN-205ENST00000366897 DPH2Q9BQC3 489 aaPredicted RBP13.26□□□□□ -0.29
PRKN-205ENST00000366897 RMND5AQ9H871 391 aa13.26□□□□□ -0.29
PRKN-205ENST00000366897 OPTCQ9UBM4 332 aa13.26□□□□□ -0.29
PRKN-205ENST00000366897 GABRQQ9UN88 632 aa13.26□□□□□ -0.29
PRKN-205ENST00000366897 A8MX80 341 aa13.26□□□□□ -0.29
PRKN-205ENST00000366897 LOC730098B7Z3J9 87 aa13.26□□□□□ -0.29
PRKN-205ENST00000366897 M0R129 80 aa13.26□□□□□ -0.29
PRKN-205ENST00000366897 OTCP00480 354 aa13.26□□□□□ -0.29
PRKN-205ENST00000366897 ALOX12P18054 663 aa13.26□□□□□ -0.29
PRKN-205ENST00000366897 HOXD10P28358 340 aa13.26□□□□□ -0.29
PRKN-205ENST00000366897 CLCN7P51798 805 aa13.26□□□□□ -0.29
PRKN-205ENST00000366897 PPP5CP53041 499 aa13.26□□□□□ -0.29
PRKN-205ENST00000366897 CYP4F2P78329 520 aa13.26□□□□□ -0.29
PRKN-205ENST00000366897 VLDLRP98155 873 aa13.26□□□□□ -0.29
PRKN-205ENST00000366897 IFITM2Q01629 132 aa13.26□□□□□ -0.29
PRKN-205ENST00000366897 TAF1AQ15573 450 aaPredicted RBP13.26□□□□□ -0.29
PRKN-205ENST00000366897 DESI1Q6ICB0 168 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms