RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 SLC22A17Q8WUG5 538 aa11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 HSPBAP1Q96EW2 488 aa11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 GMLQ99445 158 aa11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 HERPUD2Q9BSE4 406 aa11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 GTF2IRD1Q9UHL9 959 aa11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 ST14Q9Y5Y6 855 aa11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 CLIC1O00299 241 aa11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 SH3BGRLO75368 114 aa11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 RFC2P35250 354 aa11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 PTPN5P54829 565 aa11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 SRP54P61011 504 aaKnown RBP11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 RAB39AQ14964 217 aa11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 LARS2Q15031 903 aaKnown RBP11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 FNDC3BQ53EP0 1204 aaKnown RBP11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 GPR153Q6NV75 609 aa11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 ZNF783Q6ZMS7 281 aa11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 OR9I1Q8NGQ6 314 aa11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 TPK1Q9H3S4 243 aa11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 SLC27A5Q9Y2P5 690 aa11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 IGKV6-21A0A0C4DH24 114 aa11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 CREG1O75629 220 aa11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 SSR2P43308 183 aa11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 RFX3P48380 749 aa11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 CDH15P55291 814 aa11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 NAE1Q13564 534 aa11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 TMPRSS11BQ86T26 416 aa11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 TTLQ8NG68 377 aa11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 L3HYPDHQ96EM0 354 aa11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 FAM47E-STBD1D6RA91 191 aa11.55□□□□□ -0.56
CDC42BPA-202ENST00000366764 RNASEH2AO75792 299 aaKnown RBP11.55□□□□□ -0.56
CDC42BPA-202ENST00000366764 ITIH1P19827 911 aa11.55□□□□□ -0.56
CDC42BPA-202ENST00000366764 ZNF252P-AS1Q0IIN9 211 aa11.55□□□□□ -0.56
CDC42BPA-202ENST00000366764 CBX2Q14781 532 aaPredicted RBP11.55□□□□□ -0.56
CDC42BPA-202ENST00000366764 ZNF311Q5JNZ3 666 aa11.55□□□□□ -0.56
CDC42BPA-202ENST00000366764 TPGS1Q6ZTW0 290 aa11.55□□□□□ -0.56
CDC42BPA-202ENST00000366764 UTP4Q969X6 686 aaKnown RBP11.55□□□□□ -0.56
CDC42BPA-202ENST00000366764 KCTD7Q96MP8 289 aa11.55□□□□□ -0.56
CDC42BPA-202ENST00000366764 C9JVG2 144 aa11.55□□□□□ -0.56
CDC42BPA-202ENST00000366764 ZBTB46Q86UZ6 589 aa11.55□□□□□ -0.56
CDC42BPA-202ENST00000366764 MND1Q9BWT6 205 aa11.55□□□□□ -0.56
CDC42BPA-202ENST00000366764 HS3ST4Q9Y661 456 aa11.55□□□□□ -0.56
CDC42BPA-202ENST00000366764 ARL5AQ9Y689 179 aa11.55□□□□□ -0.56
CDC42BPA-202ENST00000366764 C9IYK1 514 aa11.55□□□□□ -0.56
CDC42BPA-202ENST00000366764 NOBOXO60393 691 aa11.55□□□□□ -0.56
CDC42BPA-202ENST00000366764 NOS1APO75052 506 aaPredicted RBP11.55□□□□□ -0.56
CDC42BPA-202ENST00000366764 HIST1H2ABP04908 130 aa11.55□□□□□ -0.56
CDC42BPA-202ENST00000366764 MAPK12P53778 367 aa11.55□□□□□ -0.56
CDC42BPA-202ENST00000366764 GJA9P57773 515 aa11.55□□□□□ -0.56
CDC42BPA-202ENST00000366764 OR2B6P58173 313 aa11.55□□□□□ -0.56
CDC42BPA-202ENST00000366764 RING1Q06587 406 aa11.55□□□□□ -0.56
CDC42BPA-202ENST00000366764 GK3PQ14409 553 aa11.55□□□□□ -0.56
CDC42BPA-202ENST00000366764 TPRG1LQ5T0D9 272 aa11.55□□□□□ -0.56
CDC42BPA-202ENST00000366764 HIST3H2AQ7L7L0 130 aa11.55□□□□□ -0.56
CDC42BPA-202ENST00000366764 HIST1H2ACQ93077 130 aa11.55□□□□□ -0.56
CDC42BPA-202ENST00000366764 RNF6Q9Y252 685 aa11.55□□□□□ -0.56
CDC42BPA-202ENST00000366764 LTBP3Q9NS15 1303 aa11.55□□□□□ -0.56
CDC42BPA-202ENST00000366764 KHKP50053 298 aa11.55□□□□□ -0.56
CDC42BPA-202ENST00000366764 RANBP3LQ86VV4 465 aaPredicted RBP11.55□□□□□ -0.56
CDC42BPA-202ENST00000366764 RNF19AQ9NV58 838 aa11.55□□□□□ -0.56
CDC42BPA-202ENST00000366764 ZNF222Q9UK12 451 aa11.55□□□□□ -0.56
CDC42BPA-202ENST00000366764 ACOX3O15254 700 aa11.55□□□□□ -0.56
CDC42BPA-202ENST00000366764 EBLN1P0CF75 366 aa11.55□□□□□ -0.56
CDC42BPA-202ENST00000366764 ATP13A5Q4VNC0 1218 aa11.55□□□□□ -0.56
CDC42BPA-202ENST00000366764 EIPR1Q53HC9 387 aa11.55□□□□□ -0.56
CDC42BPA-202ENST00000366764 PLD6Q8N2A8 252 aaKnown RBP11.55□□□□□ -0.56
CDC42BPA-202ENST00000366764 SLC27A6Q9Y2P4 619 aa11.55□□□□□ -0.56
CDC42BPA-202ENST00000366764 IGKV6D-21A0A0A0MT36 114 aa11.55□□□□□ -0.56
CDC42BPA-202ENST00000366764 ARHGEF33A8MVX0 844 aa11.55□□□□□ -0.56
CDC42BPA-202ENST00000366764 SCAMP3O14828 347 aaKnown RBP11.55□□□□□ -0.56
CDC42BPA-202ENST00000366764 AP2A2O94973 939 aa11.55□□□□□ -0.56
CDC42BPA-202ENST00000366764 YES1P07947 543 aa11.55□□□□□ -0.56
CDC42BPA-202ENST00000366764 FBXL22Q6P050 247 aa11.55□□□□□ -0.56
CDC42BPA-202ENST00000366764 ENTPD1P49961 510 aa11.55□□□□□ -0.56
CDC42BPA-202ENST00000366764 SMU1Q2TAY7 513 aa11.55□□□□□ -0.56
CDC42BPA-202ENST00000366764 PLEKHG4Q58EX7 1191 aa11.55□□□□□ -0.56
CDC42BPA-202ENST00000366764 NANOGP8Q6NSW7 305 aa11.55□□□□□ -0.56
CDC42BPA-202ENST00000366764 PEG10Q86TG7 708 aaKnown RBP11.55□□□□□ -0.56
CDC42BPA-202ENST00000366764 NANOGQ9H9S0 305 aa11.55□□□□□ -0.56
CDC42BPA-202ENST00000366764 ANKRD66B4E2M5 251 aa11.55□□□□□ -0.56
CDC42BPA-202ENST00000366764 CCL22O00626 93 aa11.55□□□□□ -0.56
CDC42BPA-202ENST00000366764 MYCP01106 439 aaPredicted RBP11.55□□□□□ -0.56
CDC42BPA-202ENST00000366764 HMGN1P05114 100 aa11.55□□□□□ -0.56
CDC42BPA-202ENST00000366764 THOC7Q6I9Y2 204 aaKnown RBP11.55□□□□□ -0.56
CDC42BPA-202ENST00000366764 ZDHHC14Q8IZN3 488 aa11.55□□□□□ -0.56
CDC42BPA-202ENST00000366764 EDNRBP24530 442 aa11.54□□□□□ -0.56
CDC42BPA-202ENST00000366764 SLC6A4P31645 630 aa11.54□□□□□ -0.56
CDC42BPA-202ENST00000366764 UGT2A3Q6UWM9 527 aa11.54□□□□□ -0.56
CDC42BPA-202ENST00000366764 DCBLD1Q8N8Z6 715 aa11.54□□□□□ -0.56
CDC42BPA-202ENST00000366764 OR7D4Q8NG98 312 aa11.54□□□□□ -0.56
CDC42BPA-202ENST00000366764 NEUROD4Q9HD90 331 aa11.54□□□□□ -0.56
CDC42BPA-202ENST00000366764 TRIP12Q14669 1992 aaPredicted RBP11.54□□□□□ -0.56
CDC42BPA-202ENST00000366764 hCG_2039718K7EN88 272 aa11.54□□□□□ -0.56
CDC42BPA-202ENST00000366764 ARHGEF15O94989 841 aa11.54□□□□□ -0.56
CDC42BPA-202ENST00000366764 TOP3BO95985 862 aaKnown RBP11.54□□□□□ -0.56
CDC42BPA-202ENST00000366764 MAGEA11P43364 429 aa11.54□□□□□ -0.56
CDC42BPA-202ENST00000366764 KCNK13Q9HB14 408 aa11.54□□□□□ -0.56
CDC42BPA-202ENST00000366764 A0A096LPI6 279 aa11.54□□□□□ -0.56
CDC42BPA-202ENST00000366764 PI15O43692 258 aa11.54□□□□□ -0.56
CDC42BPA-202ENST00000366764 PRKD3O94806 890 aa11.54□□□□□ -0.56
CDC42BPA-202ENST00000366764 GTF2E2P29084 291 aaKnown RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms