RNA–Protein interactions for RNA: ENST00000362588.1

RNU4-35P-201, Transcript of RNA, U4 small nuclear 35, pseudogene, humanhuman

BASIC

Gene RNU4-35P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-35P-201ENST00000362588 UNKQ9C0B0 810 aaKnown RBP3.36□□□□□ -1.87
RNU4-35P-201ENST00000362588 SPRTNQ9H040 489 aaPredicted RBP3.36□□□□□ -1.87
RNU4-35P-201ENST00000362588 RAB33BQ9H082 229 aa3.36□□□□□ -1.87
RNU4-35P-201ENST00000362588 CHST8Q9H2A9 424 aa3.36□□□□□ -1.87
RNU4-35P-201ENST00000362588 TFB2MQ9H5Q4 396 aaKnown RBP3.36□□□□□ -1.87
RNU4-35P-201ENST00000362588 SYNPO2LQ9H987 977 aa3.36□□□□□ -1.87
RNU4-35P-201ENST00000362588 GPN2Q9H9Y4 310 aaPredicted RBP3.36□□□□□ -1.87
RNU4-35P-201ENST00000362588 FBXO8Q9NRD0 319 aa3.36□□□□□ -1.87
RNU4-35P-201ENST00000362588 SMYD2Q9NRG4 433 aa3.36□□□□□ -1.87
RNU4-35P-201ENST00000362588 LATS2Q9NRM7 1088 aa3.36□□□□□ -1.87
RNU4-35P-201ENST00000362588 C1GALT1Q9NS00 363 aa3.36□□□□□ -1.87
RNU4-35P-201ENST00000362588 STARD5Q9NSY2 213 aa3.36□□□□□ -1.87
RNU4-35P-201ENST00000362588 IRAK4Q9NWZ3 460 aa3.36□□□□□ -1.87
RNU4-35P-201ENST00000362588 SEMA5BQ9P283 1151 aa3.36□□□□□ -1.87
RNU4-35P-201ENST00000362588 STOX2Q9P2F5 926 aaPredicted RBP3.36□□□□□ -1.87
RNU4-35P-201ENST00000362588 DHCR7Q9UBM7 475 aaKnown RBP3.36□□□□□ -1.87
RNU4-35P-201ENST00000362588 CROTQ9UKG9 612 aa3.36□□□□□ -1.87
RNU4-35P-201ENST00000362588 FBXO5Q9UKT4 447 aa3.36□□□□□ -1.87
RNU4-35P-201ENST00000362588 RARRES3Q9UL19 164 aa3.36□□□□□ -1.87
RNU4-35P-201ENST00000362588 BTRCQ9Y297 605 aa3.36□□□□□ -1.87
RNU4-35P-201ENST00000362588 TMEM184BQ9Y519 407 aaPredicted RBP3.36□□□□□ -1.87
RNU4-35P-201ENST00000362588 PCDHB11Q9Y5F2 797 aa3.36□□□□□ -1.87
RNU4-35P-201ENST00000362588 HEBP2Q9Y5Z4 205 aa3.36□□□□□ -1.87
RNU4-35P-201ENST00000362588 PSAT1Q9Y617 370 aa3.36□□□□□ -1.87
RNU4-35P-201ENST00000362588 FAM169AQ9Y6X4 670 aa3.36□□□□□ -1.87
RNU4-35P-201ENST00000362588 COLEC10Q9Y6Z7 277 aa3.36□□□□□ -1.87
RNU4-35P-201ENST00000362588 DOPEY2Q9Y3R5 2298 aa3.36□□□□□ -1.87
RNU4-35P-201ENST00000362588 GCN1Q92616 2671 aaKnown RBP3.36□□□□□ -1.87
RNU4-35P-201ENST00000362588 SHANK1Q9Y566 2161 aa3.35□□□□□ -1.87
RNU4-35P-201ENST00000362588 LOC105369274A0A096LPK9 316 aa3.35□□□□□ -1.87
RNU4-35P-201ENST00000362588 LOC102723532A0A0G2JNH3 316 aa3.35□□□□□ -1.87
RNU4-35P-201ENST00000362588 A0A0J9YVX5 310 aa3.35□□□□□ -1.87
RNU4-35P-201ENST00000362588 A0A0J9YY10 115 aa3.35□□□□□ -1.87
RNU4-35P-201ENST00000362588 A0A1W2PPV9 198 aa3.35□□□□□ -1.87
RNU4-35P-201ENST00000362588 CDC14CA4D256 554 aa3.35□□□□□ -1.87
RNU4-35P-201ENST00000362588 EIF4E1BA6NMX2 242 aaKnown RBP3.35□□□□□ -1.87
RNU4-35P-201ENST00000362588 CXorf49A8MYA2 514 aaPredicted RBP3.35□□□□□ -1.87
RNU4-35P-201ENST00000362588 C2orf74A8MZ97 194 aa3.35□□□□□ -1.87
RNU4-35P-201ENST00000362588 H3BMH7 237 aa3.35□□□□□ -1.87
RNU4-35P-201ENST00000362588 CCDC188H7C350 402 aa3.35□□□□□ -1.87
RNU4-35P-201ENST00000362588 ERVH48-1M5A8F1 160 aa3.35□□□□□ -1.87
RNU4-35P-201ENST00000362588 MASP2O00187 686 aa3.35□□□□□ -1.87
RNU4-35P-201ENST00000362588 AP3B1O00203 1094 aa3.35□□□□□ -1.87
RNU4-35P-201ENST00000362588 MATN2O00339 956 aa3.35□□□□□ -1.87
RNU4-35P-201ENST00000362588 TERTO14746 1132 aaKnown RBP3.35□□□□□ -1.87
RNU4-35P-201ENST00000362588 RASGRF2O14827 1237 aa3.35□□□□□ -1.87
RNU4-35P-201ENST00000362588 FFAR3O14843 346 aa3.35□□□□□ -1.87
RNU4-35P-201ENST00000362588 ATXN7O15265 892 aaPredicted RBP3.35□□□□□ -1.87
RNU4-35P-201ENST00000362588 TOX3O15405 576 aaPredicted RBP3.35□□□□□ -1.87
RNU4-35P-201ENST00000362588 GPR42O15529 346 aa3.35□□□□□ -1.87
RNU4-35P-201ENST00000362588 ZNF749O43361 778 aa3.35□□□□□ -1.87
RNU4-35P-201ENST00000362588 PRICKLE3O43900 615 aaPredicted RBP3.35□□□□□ -1.87
RNU4-35P-201ENST00000362588 CTSVO60911 334 aa3.35□□□□□ -1.87
RNU4-35P-201ENST00000362588 CNOT3O75175 753 aaKnown RBP3.35□□□□□ -1.87
RNU4-35P-201ENST00000362588 DNAJB5O75953 348 aa3.35□□□□□ -1.87
RNU4-35P-201ENST00000362588 URI1O94763 535 aaPredicted RBP3.35□□□□□ -1.87
RNU4-35P-201ENST00000362588 MED26O95402 600 aa3.35□□□□□ -1.87
RNU4-35P-201ENST00000362588 SYF2O95926 243 aaKnown RBP3.35□□□□□ -1.87
RNU4-35P-201ENST00000362588 AHSGP02765 367 aa3.35□□□□□ -1.87
RNU4-35P-201ENST00000362588 ESR1P03372 595 aa3.35□□□□□ -1.87
RNU4-35P-201ENST00000362588 GSTM1P09488 218 aa3.35□□□□□ -1.87
RNU4-35P-201ENST00000362588 CBSLP0DN79 551 aa3.35□□□□□ -1.87
RNU4-35P-201ENST00000362588 CYP2A7P20853 494 aa3.35□□□□□ -1.87
RNU4-35P-201ENST00000362588 SAT1P21673 171 aa3.35□□□□□ -1.87
RNU4-35P-201ENST00000362588 CD9P21926 228 aa3.35□□□□□ -1.87
RNU4-35P-201ENST00000362588 SSTR1P30872 391 aa3.35□□□□□ -1.87
RNU4-35P-201ENST00000362588 CBSP35520 551 aa3.35□□□□□ -1.87
RNU4-35P-201ENST00000362588 PPARGP37231 505 aaPredicted RBP3.35□□□□□ -1.87
RNU4-35P-201ENST00000362588 RAB28P51157 221 aa3.35□□□□□ -1.87
RNU4-35P-201ENST00000362588 UCNP55089 124 aa3.35□□□□□ -1.87
RNU4-35P-201ENST00000362588 ITGA1P56199 1179 aa3.35□□□□□ -1.87
RNU4-35P-201ENST00000362588 ARL4CP56559 192 aa3.35□□□□□ -1.87
RNU4-35P-201ENST00000362588 ETF1P62495 437 aaKnown RBP3.35□□□□□ -1.87
RNU4-35P-201ENST00000362588 SNRPNP63162 240 aaKnown RBP3.35□□□□□ -1.87
RNU4-35P-201ENST00000362588 TUBB4BP68371 445 aa3.35□□□□□ -1.87
RNU4-35P-201ENST00000362588 SLC7A5Q01650 507 aa3.35□□□□□ -1.87
RNU4-35P-201ENST00000362588 GSTM4Q03013 218 aa3.35□□□□□ -1.87
RNU4-35P-201ENST00000362588 ACY1Q03154 408 aa3.35□□□□□ -1.87
RNU4-35P-201ENST00000362588 ABHD18Q0P651 414 aa3.35□□□□□ -1.87
RNU4-35P-201ENST00000362588 CDC20Q12834 499 aa3.35□□□□□ -1.87
RNU4-35P-201ENST00000362588 IL10RAQ13651 578 aa3.35□□□□□ -1.87
RNU4-35P-201ENST00000362588 TUBB2AQ13885 445 aa3.35□□□□□ -1.87
RNU4-35P-201ENST00000362588 GBX1Q14549 363 aa3.35□□□□□ -1.87
RNU4-35P-201ENST00000362588 MORF4L2Q15014 288 aa3.35□□□□□ -1.87
RNU4-35P-201ENST00000362588 EFTUD2Q15029 972 aaKnown RBP eCLIP3.35□□□□□ -1.87
RNU4-35P-201ENST00000362588 TBR1Q16650 682 aa3.35□□□□□ -1.87
RNU4-35P-201ENST00000362588 HIF1AQ16665 826 aa3.35□□□□□ -1.87
RNU4-35P-201ENST00000362588 DEFB109BQ30KR1 87 aa3.35□□□□□ -1.87
RNU4-35P-201ENST00000362588 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.35□□□□□ -1.87
RNU4-35P-201ENST00000362588 DNAJC21Q5F1R6 531 aaKnown RBP3.35□□□□□ -1.87
RNU4-35P-201ENST00000362588 SPANXN3Q5MJ09 141 aa3.35□□□□□ -1.87
RNU4-35P-201ENST00000362588 PLEKHS1Q5SXH7 462 aa3.35□□□□□ -1.87
RNU4-35P-201ENST00000362588 TEDDM1Q5T9Z0 273 aa3.35□□□□□ -1.87
RNU4-35P-201ENST00000362588 RNF187Q5TA31 235 aaPredicted RBP3.35□□□□□ -1.87
RNU4-35P-201ENST00000362588 CPZQ66K79 652 aa3.35□□□□□ -1.87
RNU4-35P-201ENST00000362588 STEAP4Q687X5 459 aa3.35□□□□□ -1.87
RNU4-35P-201ENST00000362588 FCRL6Q6DN72 434 aa3.35□□□□□ -1.87
RNU4-35P-201ENST00000362588 FRMPD2BQ6IN97 320 aa3.35□□□□□ -1.87
RNU4-35P-201ENST00000362588 FIGLAQ6QHK4 219 aa3.35□□□□□ -1.87
RNU4-35P-201ENST00000362588 PAQR3Q6TCH7 311 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms