RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 CPSF4LA6NMK7 179 aaKnown RBP18.18■□□□□ 0.5
CLIP2-202ENST00000361545 ACTR3P61158 418 aa18.18■□□□□ 0.5
CLIP2-202ENST00000361545 GPR107Q5VW38 600 aa18.18■□□□□ 0.5
CLIP2-202ENST00000361545 C1orf52Q8N6N3 182 aaKnown RBP18.18■□□□□ 0.5
CLIP2-202ENST00000361545 RASSF5Q8WWW0 418 aa18.18■□□□□ 0.5
CLIP2-202ENST00000361545 FEM1AQ9BSK4 669 aa18.18■□□□□ 0.5
CLIP2-202ENST00000361545 SSR3Q9UNL2 185 aa18.18■□□□□ 0.5
CLIP2-202ENST00000361545 DGKBQ9Y6T7 804 aa18.18■□□□□ 0.5
CLIP2-202ENST00000361545 CAPN8A6NHC0 703 aa18.17■□□□□ 0.5
CLIP2-202ENST00000361545 SCELO95171 688 aa18.17■□□□□ 0.5
CLIP2-202ENST00000361545 FADS2O95864 444 aaKnown RBP18.17■□□□□ 0.5
CLIP2-202ENST00000361545 SUZ12Q15022 739 aaKnown RBP18.17■□□□□ 0.5
CLIP2-202ENST00000361545 RALGPS1Q5JS13 557 aa18.17■□□□□ 0.5
CLIP2-202ENST00000361545 WDR45BQ5MNZ6 344 aa18.17■□□□□ 0.5
CLIP2-202ENST00000361545 MORN1Q5T089 497 aa18.17■□□□□ 0.5
CLIP2-202ENST00000361545 SMARCD3Q6STE5 483 aa18.17■□□□□ 0.5
CLIP2-202ENST00000361545 ARL10Q8N8L6 244 aa18.17■□□□□ 0.5
CLIP2-202ENST00000361545 GLB1L3Q8NCI6 653 aaPredicted RBP18.17■□□□□ 0.5
CLIP2-202ENST00000361545 DCAKDQ8WVC6 231 aa18.17■□□□□ 0.5
CLIP2-202ENST00000361545 IGSF8Q969P0 613 aa18.17■□□□□ 0.5
CLIP2-202ENST00000361545 A0A1W2PP55 124 aa18.17■□□□□ 0.5
CLIP2-202ENST00000361545 ZNF840PA6NDX5 716 aa18.17■□□□□ 0.5
CLIP2-202ENST00000361545 WWP2O00308 870 aa18.17■□□□□ 0.5
CLIP2-202ENST00000361545 PITPNM1O00562 1244 aa18.17■□□□□ 0.5
CLIP2-202ENST00000361545 UGT2B11O75310 529 aa18.17■□□□□ 0.5
CLIP2-202ENST00000361545 HNRNPA1P09651 372 aaKnown RBP eCLIP18.17■□□□□ 0.5
CLIP2-202ENST00000361545 TTKP33981 857 aa18.17■□□□□ 0.5
CLIP2-202ENST00000361545 CLCN7P51798 805 aa18.17■□□□□ 0.5
CLIP2-202ENST00000361545 GKN2Q86XP6 184 aa18.17■□□□□ 0.5
CLIP2-202ENST00000361545 TMEM130Q8N3G9 435 aa18.17■□□□□ 0.5
CLIP2-202ENST00000361545 PIGXQ8TBF5 258 aa18.17■□□□□ 0.5
CLIP2-202ENST00000361545 SCAMP4Q969E2 229 aa18.17■□□□□ 0.5
CLIP2-202ENST00000361545 RIIAD1A6NNX1 92 aa18.17■□□□□ 0.5
CLIP2-202ENST00000361545 CXCR6O00574 342 aa18.17■□□□□ 0.5
CLIP2-202ENST00000361545 DCLK1O15075 740 aa18.17■□□□□ 0.5
CLIP2-202ENST00000361545 PRKD1Q15139 912 aaPredicted RBP18.17■□□□□ 0.5
CLIP2-202ENST00000361545 MSS51Q4VC12 460 aa18.17■□□□□ 0.5
CLIP2-202ENST00000361545 FRG2Q64ET8 278 aa18.17■□□□□ 0.5
CLIP2-202ENST00000361545 SLC30A6Q6NXT4 461 aa18.17■□□□□ 0.5
CLIP2-202ENST00000361545 GPR65Q8IYL9 337 aa18.17■□□□□ 0.5
CLIP2-202ENST00000361545 CAMKVQ8NCB2 501 aa18.17■□□□□ 0.5
CLIP2-202ENST00000361545 NAT14Q8WUY8 206 aa18.17■□□□□ 0.5
CLIP2-202ENST00000361545 FRG2BQ96QU4 278 aa18.17■□□□□ 0.5
CLIP2-202ENST00000361545 SLC2A4RGQ9NR83 387 aa18.17■□□□□ 0.5
CLIP2-202ENST00000361545 ZNF282Q9UDV7 671 aaPredicted RBP18.17■□□□□ 0.5
CLIP2-202ENST00000361545 ARFGEF2Q9Y6D5 1785 aa18.17■□□□□ 0.5
CLIP2-202ENST00000361545 RBM47A0AV96 593 aaKnown RBP18.17■□□□□ 0.5
CLIP2-202ENST00000361545 HOXB6P17509 224 aaKnown RBP18.17■□□□□ 0.5
CLIP2-202ENST00000361545 CSNK2A2P19784 350 aaPredicted RBP18.17■□□□□ 0.5
CLIP2-202ENST00000361545 OMPP47874 163 aa18.17■□□□□ 0.5
CLIP2-202ENST00000361545 RAB8AP61006 207 aa18.17■□□□□ 0.5
CLIP2-202ENST00000361545 ERVK-8P63133 956 aa18.17■□□□□ 0.5
CLIP2-202ENST00000361545 PEG10Q86TG7 708 aaKnown RBP18.17■□□□□ 0.5
CLIP2-202ENST00000361545 OR5AK3PQ8NH89 298 aa18.17■□□□□ 0.5
CLIP2-202ENST00000361545 TRNT1Q96Q11 434 aaKnown RBP18.17■□□□□ 0.5
CLIP2-202ENST00000361545 NDC1Q9BTX1 674 aa18.17■□□□□ 0.5
CLIP2-202ENST00000361545 HMG20AQ9NP66 347 aa18.17■□□□□ 0.5
CLIP2-202ENST00000361545 FAM159BA6NKW6 160 aa18.16■□□□□ 0.5
CLIP2-202ENST00000361545 LIN7AO14910 233 aaPredicted RBP18.16■□□□□ 0.5
CLIP2-202ENST00000361545 NME6O75414 186 aaPredicted RBP18.16■□□□□ 0.5
CLIP2-202ENST00000361545 SERPINA1P01009 418 aa18.16■□□□□ 0.5
CLIP2-202ENST00000361545 VIPR2P41587 438 aa18.16■□□□□ 0.5
CLIP2-202ENST00000361545 DPY19L3Q6ZPD9 716 aa18.16■□□□□ 0.5
CLIP2-202ENST00000361545 KBTBD8Q8NFY9 601 aa18.16■□□□□ 0.5
CLIP2-202ENST00000361545 C1GALT1C1Q96EU7 318 aa18.16■□□□□ 0.5
CLIP2-202ENST00000361545 CCNB1IP1Q9NPC3 277 aa18.16■□□□□ 0.5
CLIP2-202ENST00000361545 FETUBQ9UGM5 382 aa18.16■□□□□ 0.5
CLIP2-202ENST00000361545 KPNA4O00629 521 aaPredicted RBP18.16■□□□□ 0.5
CLIP2-202ENST00000361545 BMPR1AP36894 532 aa18.16■□□□□ 0.5
CLIP2-202ENST00000361545 SUSD1Q6UWL2 747 aa18.16■□□□□ 0.5
CLIP2-202ENST00000361545 ERN2Q76MJ5 926 aaKnown RBP18.16■□□□□ 0.5
CLIP2-202ENST00000361545 SORCS1Q8WY21 1168 aa18.16■□□□□ 0.5
CLIP2-202ENST00000361545 C1orf74Q96LT6 269 aa18.16■□□□□ 0.5
CLIP2-202ENST00000361545 CLK4Q9HAZ1 481 aaKnown RBP18.16■□□□□ 0.5
CLIP2-202ENST00000361545 CRNNQ9UBG3 495 aaPredicted RBP18.16■□□□□ 0.5
CLIP2-202ENST00000361545 MAGEB3O15480 346 aa18.16■□□□□ 0.5
CLIP2-202ENST00000361545 SEC24AO95486 1093 aa18.16■□□□□ 0.5
CLIP2-202ENST00000361545 ETV3P41162 512 aa18.16■□□□□ 0.5
CLIP2-202ENST00000361545 ROPN1LQ96C74 230 aa18.16■□□□□ 0.5
CLIP2-202ENST00000361545 RBM4BQ9BQ04 359 aaKnown RBP18.16■□□□□ 0.5
CLIP2-202ENST00000361545 RBM4Q9BWF3 364 aaKnown RBP18.16■□□□□ 0.5
CLIP2-202ENST00000361545 VRTNQ9H8Y1 702 aa18.16■□□□□ 0.5
CLIP2-202ENST00000361545 FLRT1Q9NZU1 646 aa18.16■□□□□ 0.5
CLIP2-202ENST00000361545 BCKDKO14874 412 aa18.16■□□□□ 0.5
CLIP2-202ENST00000361545 CA3P07451 260 aa18.16■□□□□ 0.5
CLIP2-202ENST00000361545 STC1P52823 247 aa18.16■□□□□ 0.5
CLIP2-202ENST00000361545 PTCHD3Q3KNS1 767 aa18.16■□□□□ 0.5
CLIP2-202ENST00000361545 KLHL24Q6TFL4 600 aa18.16■□□□□ 0.5
CLIP2-202ENST00000361545 LRRC70Q7Z2Q7 622 aa18.16■□□□□ 0.5
CLIP2-202ENST00000361545 AK5Q9Y6K8 562 aa18.16■□□□□ 0.5
CLIP2-202ENST00000361545 TGM5O43548 720 aa18.16■□□□□ 0.5
CLIP2-202ENST00000361545 ITM2AO43736 263 aa18.16■□□□□ 0.5
CLIP2-202ENST00000361545 KIF13AQ9H1H9 1805 aa18.16■□□□□ 0.5
CLIP2-202ENST00000361545 TMEM233B4DJY2 109 aa18.15■□□□□ 0.5
CLIP2-202ENST00000361545 NR1H2P55055 460 aa18.15■□□□□ 0.5
CLIP2-202ENST00000361545 TMEM115Q12893 351 aaPredicted RBP18.15■□□□□ 0.5
CLIP2-202ENST00000361545 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.15■□□□□ 0.57e-6■□□□□ 9.5
CLIP2-202ENST00000361545 SREK1IP1Q8N9Q2 155 aaPredicted RBP18.15■□□□□ 0.5
CLIP2-202ENST00000361545 SMARCD2Q92925 531 aa18.15■□□□□ 0.5
CLIP2-202ENST00000361545 NSMCE3Q96MG7 304 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms