RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 OVCA2Q8WZ82 227 aa12.97□□□□□ -0.33
SRGAP3-201ENST00000360413 SYT4Q9H2B2 425 aa12.97□□□□□ -0.33
SRGAP3-201ENST00000360413 ANKHQ9HCJ1 492 aa12.97□□□□□ -0.33
SRGAP3-201ENST00000360413 DNAJC5BQ9UF47 199 aa12.97□□□□□ -0.33
SRGAP3-201ENST00000360413 USP31Q70CQ4 1352 aa12.97□□□□□ -0.33
SRGAP3-201ENST00000360413 PAPSS1O43252 624 aaPredicted RBP12.97□□□□□ -0.33
SRGAP3-201ENST00000360413 PORP16435 677 aaPredicted RBP12.97□□□□□ -0.33
SRGAP3-201ENST00000360413 CD72P21854 359 aa12.97□□□□□ -0.33
SRGAP3-201ENST00000360413 VSTM1Q6UX27 236 aa12.97□□□□□ -0.33
SRGAP3-201ENST00000360413 ZYG11AQ6WRX3 759 aa12.97□□□□□ -0.33
SRGAP3-201ENST00000360413 TAS1R3Q7RTX0 852 aa12.97□□□□□ -0.33
SRGAP3-201ENST00000360413 ARHGAP12Q8IWW6 846 aa12.97□□□□□ -0.33
SRGAP3-201ENST00000360413 COQ8BQ96D53 544 aa12.97□□□□□ -0.33
SRGAP3-201ENST00000360413 TMEM246Q9BRR3 403 aa12.97□□□□□ -0.33
SRGAP3-201ENST00000360413 RPL36Q9Y3U8 105 aaKnown RBP12.97□□□□□ -0.33
SRGAP3-201ENST00000360413 ENTPD6O75354 484 aa12.96□□□□□ -0.33
SRGAP3-201ENST00000360413 IFNA2P01563 188 aa12.96□□□□□ -0.33
SRGAP3-201ENST00000360413 NDUFS1P28331 727 aa12.96□□□□□ -0.33
SRGAP3-201ENST00000360413 MTMR9Q96QG7 549 aa12.96□□□□□ -0.33
SRGAP3-201ENST00000360413 CORO1BQ9BR76 489 aa12.96□□□□□ -0.33
SRGAP3-201ENST00000360413 LOXHD1Q8IVV2 1947 aa12.96□□□□□ -0.33
SRGAP3-201ENST00000360413 C8BP07358 591 aa12.96□□□□□ -0.33
SRGAP3-201ENST00000360413 GNAZP19086 355 aa12.96□□□□□ -0.33
SRGAP3-201ENST00000360413 VAMP1P23763 118 aa12.96□□□□□ -0.33
SRGAP3-201ENST00000360413 RAVER1Q8IY67 606 aaKnown RBP12.96□□□□□ -0.33
SRGAP3-201ENST00000360413 BORCS8Q96FH0 119 aa12.96□□□□□ -0.33
SRGAP3-201ENST00000360413 SENP8Q96LD8 212 aa12.96□□□□□ -0.33
SRGAP3-201ENST00000360413 ADAM7Q9H2U9 754 aa12.96□□□□□ -0.33
SRGAP3-201ENST00000360413 KCNQ5Q9NR82 932 aa12.96□□□□□ -0.33
SRGAP3-201ENST00000360413 AGO1Q9UL18 857 aaKnown RBP12.96□□□□□ -0.33
SRGAP3-201ENST00000360413 PLEKHA6Q9Y2H5 1048 aa12.96□□□□□ -0.33
SRGAP3-201ENST00000360413 DUSP4Q13115 394 aa12.96□□□□□ -0.33
SRGAP3-201ENST00000360413 PITRM1Q5JRX3 1037 aa12.96□□□□□ -0.33
SRGAP3-201ENST00000360413 RAP1GAP2Q684P5 730 aa12.96□□□□□ -0.33
SRGAP3-201ENST00000360413 NR4A3Q92570 626 aa12.96□□□□□ -0.33
SRGAP3-201ENST00000360413 TMEM203Q969S6 136 aa12.96□□□□□ -0.33
SRGAP3-201ENST00000360413 SLC7A6OSQ96CW6 309 aaPredicted RBP12.96□□□□□ -0.33
SRGAP3-201ENST00000360413 VWA7Q9Y334 891 aa12.96□□□□□ -0.33
SRGAP3-201ENST00000360413 CXCR6O00574 342 aa12.96□□□□□ -0.33
SRGAP3-201ENST00000360413 FARS2O95363 451 aaKnown RBP12.96□□□□□ -0.33
SRGAP3-201ENST00000360413 RPL10P27635 214 aaKnown RBP12.96□□□□□ -0.33
SRGAP3-201ENST00000360413 P4HA3Q7Z4N8 544 aa12.96□□□□□ -0.33
SRGAP3-201ENST00000360413 FAM35AQ86V20 835 aa12.96□□□□□ -0.33
SRGAP3-201ENST00000360413 PDSS2Q86YH6 399 aa12.96□□□□□ -0.33
SRGAP3-201ENST00000360413 OR5K1Q8NHB7 308 aa12.96□□□□□ -0.33
SRGAP3-201ENST00000360413 SLC38A3Q99624 504 aa12.96□□□□□ -0.33
SRGAP3-201ENST00000360413 PAQR5Q9NXK6 330 aaPredicted RBP12.96□□□□□ -0.33
SRGAP3-201ENST00000360413 ATG12O94817 140 aa12.96□□□□□ -0.33
SRGAP3-201ENST00000360413 AGXTP21549 392 aa12.96□□□□□ -0.33
SRGAP3-201ENST00000360413 ELOAQ14241 798 aaKnown RBP12.96□□□□□ -0.33
SRGAP3-201ENST00000360413 FKBP1CQ5VVH2 108 aa12.96□□□□□ -0.33
SRGAP3-201ENST00000360413 C3orf33Q6P1S2 294 aa12.96□□□□□ -0.33
SRGAP3-201ENST00000360413 KLHL36Q8N4N3 616 aa12.96□□□□□ -0.33
SRGAP3-201ENST00000360413 ZNF781Q8N8C0 355 aa12.96□□□□□ -0.33
SRGAP3-201ENST00000360413 TCTEX1D2Q8WW35 142 aa12.96□□□□□ -0.33
SRGAP3-201ENST00000360413 TMED9Q9BVK6 235 aa12.96□□□□□ -0.33
SRGAP3-201ENST00000360413 DISP2A7MBM2 1401 aa12.96□□□□□ -0.34
SRGAP3-201ENST00000360413 ABCC3O15438 1527 aa12.96□□□□□ -0.34
SRGAP3-201ENST00000360413 FOXO6A8MYZ6 492 aa12.96□□□□□ -0.34
SRGAP3-201ENST00000360413 MEN1O00255 615 aa12.96□□□□□ -0.34
SRGAP3-201ENST00000360413 B3GALT2O43825 422 aa12.96□□□□□ -0.34
SRGAP3-201ENST00000360413 MATKP42679 507 aa12.96□□□□□ -0.34
SRGAP3-201ENST00000360413 SOX10P56693 466 aa12.96□□□□□ -0.34
SRGAP3-201ENST00000360413 ERVK-21P61565 698 aa12.96□□□□□ -0.34
SRGAP3-201ENST00000360413 PGM5Q15124 567 aa12.96□□□□□ -0.34
SRGAP3-201ENST00000360413 ISOC1Q96CN7 298 aa12.96□□□□□ -0.34
SRGAP3-201ENST00000360413 EIF5A2Q9GZV4 153 aaKnown RBP12.96□□□□□ -0.34
SRGAP3-201ENST00000360413 OR51V1Q9H2C8 321 aa12.96□□□□□ -0.34
SRGAP3-201ENST00000360413 DERAQ9Y315 318 aa12.96□□□□□ -0.34
SRGAP3-201ENST00000360413 ALKQ9UM73 1620 aa12.96□□□□□ -0.34
SRGAP3-201ENST00000360413 C16orf59Q7L2K0 433 aa12.96□□□□□ -0.34
SRGAP3-201ENST00000360413 GPAT4Q86UL3 456 aa12.96□□□□□ -0.34
SRGAP3-201ENST00000360413 SSX3Q99909 188 aa12.96□□□□□ -0.34
SRGAP3-201ENST00000360413 TTYH2Q9BSA4 534 aa12.96□□□□□ -0.34
SRGAP3-201ENST00000360413 YTHDF1Q9BYJ9 559 aaKnown RBP12.96□□□□□ -0.34
SRGAP3-201ENST00000360413 FBXL3Q9UKT7 428 aa12.96□□□□□ -0.34
SRGAP3-201ENST00000360413 OAZ3Q9UMX2 235 aa12.96□□□□□ -0.34
SRGAP3-201ENST00000360413 DAPL1A0PJW8 107 aa12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 OR2B3O76000 313 aa12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 RECQL4O94761 1208 aa12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 CSTBP04080 98 aaKnown RBP12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 ZNF404Q494X3 552 aa12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 ARL13AQ5H913 290 aaPredicted RBP12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 ATAD3CQ5T2N8 411 aa12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 SLC43A3Q8NBI5 491 aa12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 RNF121Q9H920 327 aa12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 IMP3Q9NV31 184 aaKnown RBP12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 NR2E1Q9Y466 385 aa12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 COL1A2P08123 1366 aa12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 MAP3K8P41279 467 aa12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 GBX2P52951 348 aaPredicted RBP12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 MRPS6P82932 125 aaKnown RBP12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 DCLRE1AQ6PJP8 1040 aa12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 FAM183BPQ6ZVS7 135 aa12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 C9orf43Q8TAL5 461 aaPredicted RBP12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 KLHL6Q8WZ60 621 aa12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 C7orf50Q9BRJ6 194 aaKnown RBP12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 LIN28AQ9H9Z2 209 aaKnown RBP12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 MAFKO60675 156 aa12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 HK1P19367 917 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms