RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 NXPE1Q8N323 547 aa15.74■□□□□ 0.11
COL18A1-203ENST00000359759 PHC3Q8NDX5 983 aa15.74■□□□□ 0.11
COL18A1-203ENST00000359759 STOML3Q8TAV4 291 aa15.74■□□□□ 0.11
COL18A1-203ENST00000359759 CCDC107Q8WV48 283 aa15.74■□□□□ 0.11
COL18A1-203ENST00000359759 LCN9Q8WX39 176 aa15.74■□□□□ 0.11
COL18A1-203ENST00000359759 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.74■□□□□ 0.111e-6■■■□□ 16.6
COL18A1-203ENST00000359759 LHX5Q9H2C1 402 aa15.74■□□□□ 0.11
COL18A1-203ENST00000359759 EBF2Q9HAK2 575 aa15.74■□□□□ 0.11
COL18A1-203ENST00000359759 FSTL5Q8N475 847 aaPredicted RBP15.74■□□□□ 0.11
COL18A1-203ENST00000359759 ZNF431Q8TF32 576 aaPredicted RBP15.74■□□□□ 0.11
COL18A1-203ENST00000359759 ADAD1Q96M93 576 aaKnown RBP15.74■□□□□ 0.11
COL18A1-203ENST00000359759 LYARQ9NX58 379 aaKnown RBP15.74■□□□□ 0.11
COL18A1-203ENST00000359759 DNAJB9Q9UBS3 223 aa15.74■□□□□ 0.11
COL18A1-203ENST00000359759 NR2E3Q9Y5X4 410 aa15.74■□□□□ 0.11
COL18A1-203ENST00000359759 TTC24A2A3L6 582 aaPredicted RBP15.74■□□□□ 0.11
COL18A1-203ENST00000359759 B3GALT2O43825 422 aa15.74■□□□□ 0.11
COL18A1-203ENST00000359759 PTNP21246 168 aa15.74■□□□□ 0.11
COL18A1-203ENST00000359759 FOXM1Q08050 763 aa15.74■□□□□ 0.11
COL18A1-203ENST00000359759 RPA4Q13156 261 aa15.74■□□□□ 0.11
COL18A1-203ENST00000359759 PAQR7Q86WK9 346 aa15.74■□□□□ 0.11
COL18A1-203ENST00000359759 CPA6Q8N4T0 437 aa15.74■□□□□ 0.11
COL18A1-203ENST00000359759 ATAD1Q8NBU5 361 aa15.74■□□□□ 0.11
COL18A1-203ENST00000359759 MCCC2Q9HCC0 563 aa15.74■□□□□ 0.11
COL18A1-203ENST00000359759 GDAP2Q9NXN4 497 aa15.74■□□□□ 0.11
COL18A1-203ENST00000359759 SIRPGQ9P1W8 387 aa15.74■□□□□ 0.11
COL18A1-203ENST00000359759 DNAJA2O60884 412 aa15.73■□□□□ 0.11
COL18A1-203ENST00000359759 OPN1SWP03999 348 aa15.73■□□□□ 0.11
COL18A1-203ENST00000359759 CD2P06729 351 aa15.73■□□□□ 0.11
COL18A1-203ENST00000359759 KELP23276 732 aa15.73■□□□□ 0.11
COL18A1-203ENST00000359759 TBC1D25Q3MII6 688 aa15.73■□□□□ 0.11
COL18A1-203ENST00000359759 MFSD5Q6N075 450 aa15.73■□□□□ 0.11
COL18A1-203ENST00000359759 HDDC3Q8N4P3 179 aa15.73■□□□□ 0.11
COL18A1-203ENST00000359759 PCDH19Q8TAB3 1148 aa15.73■□□□□ 0.11
COL18A1-203ENST00000359759 ZNF347Q96SE7 839 aa15.73■□□□□ 0.11
COL18A1-203ENST00000359759 TSPAN18Q96SJ8 248 aa15.73■□□□□ 0.11
COL18A1-203ENST00000359759 ZNF226Q9NYT6 803 aa15.73■□□□□ 0.11
COL18A1-203ENST00000359759 ITSN1Q15811 1721 aa15.73■□□□□ 0.11
COL18A1-203ENST00000359759 CYP11A1P05108 521 aa15.73■□□□□ 0.11
COL18A1-203ENST00000359759 RBM34P42696 430 aaKnown RBP15.73■□□□□ 0.11
COL18A1-203ENST00000359759 RPS14P62263 151 aaKnown RBP15.73■□□□□ 0.11
COL18A1-203ENST00000359759 SLC13A3Q8WWT9 602 aa15.73■□□□□ 0.11
COL18A1-203ENST00000359759 C9IYK1 514 aa15.73■□□□□ 0.11
COL18A1-203ENST00000359759 J3QLW9 94 aa15.73■□□□□ 0.11
COL18A1-203ENST00000359759 J3QRK9 145 aa15.73■□□□□ 0.11
COL18A1-203ENST00000359759 PPM1BO75688 479 aa15.73■□□□□ 0.11
COL18A1-203ENST00000359759 CH25HO95992 272 aa15.73■□□□□ 0.11
COL18A1-203ENST00000359759 CST3P01034 146 aaPredicted RBP15.73■□□□□ 0.11
COL18A1-203ENST00000359759 ZNF19P17023 458 aa15.73■□□□□ 0.11
COL18A1-203ENST00000359759 ZNF3P17036 446 aa15.73■□□□□ 0.11
COL18A1-203ENST00000359759 GJA9P57773 515 aa15.73■□□□□ 0.11
COL18A1-203ENST00000359759 PUS10Q3MIT2 529 aaKnown RBP15.73■□□□□ 0.11
COL18A1-203ENST00000359759 NADK2Q4G0N4 442 aa15.73■□□□□ 0.11
COL18A1-203ENST00000359759 ARSHQ5FYA8 562 aa15.73■□□□□ 0.11
COL18A1-203ENST00000359759 CRB2Q5IJ48 1285 aa15.73■□□□□ 0.11
COL18A1-203ENST00000359759 ATAT1Q5SQI0 421 aa15.73■□□□□ 0.11
COL18A1-203ENST00000359759 ZNF101Q8IZC7 436 aa15.73■□□□□ 0.11
COL18A1-203ENST00000359759 IQCKQ8N0W5 287 aa15.73■□□□□ 0.11
COL18A1-203ENST00000359759 GALNT6Q8NCL4 622 aa15.73■□□□□ 0.11
COL18A1-203ENST00000359759 AKAP1Q92667 903 aaKnown RBP eCLIP15.73■□□□□ 0.117e-8■■■■□ 21.4
COL18A1-203ENST00000359759 FBXL8Q96CD0 374 aa15.73■□□□□ 0.11
COL18A1-203ENST00000359759 WACQ9BTA9 647 aa15.73■□□□□ 0.11
COL18A1-203ENST00000359759 TTTY10Q9BZA0 68 aa15.73■□□□□ 0.11
COL18A1-203ENST00000359759 E2F3O00716 465 aa15.73■□□□□ 0.11
COL18A1-203ENST00000359759 GLUD1P00367 558 aa15.73■□□□□ 0.11
COL18A1-203ENST00000359759 NUDT6P53370 316 aa15.73■□□□□ 0.11
COL18A1-203ENST00000359759 AP1S1P61966 158 aa15.73■□□□□ 0.11
COL18A1-203ENST00000359759 ZNF517Q6ZMY9 492 aaPredicted RBP15.73■□□□□ 0.11
COL18A1-203ENST00000359759 FBXL16Q8N461 479 aa15.73■□□□□ 0.11
COL18A1-203ENST00000359759 POGLUT1Q8NBL1 392 aa15.73■□□□□ 0.11
COL18A1-203ENST00000359759 HSPBAP1Q96EW2 488 aa15.73■□□□□ 0.11
COL18A1-203ENST00000359759 POLR2J3Q9H1A7 115 aaKnown RBP15.73■□□□□ 0.11
COL18A1-203ENST00000359759 CYTH4Q9UIA0 394 aa15.73■□□□□ 0.11
COL18A1-203ENST00000359759 FAM237AA0A1B0GTK4 181 aa15.73■□□□□ 0.11
COL18A1-203ENST00000359759 PPP1R8Q12972 351 aaKnown RBP15.73■□□□□ 0.11
COL18A1-203ENST00000359759 GPR68Q15743 365 aa15.73■□□□□ 0.11
COL18A1-203ENST00000359759 ARL9Q6T311 187 aa15.73■□□□□ 0.11
COL18A1-203ENST00000359759 OR8S1Q8NH09 359 aa15.73■□□□□ 0.11
COL18A1-203ENST00000359759 COQ8AQ8NI60 647 aa15.73■□□□□ 0.11
COL18A1-203ENST00000359759 S100PBPQ96BU1 408 aa15.73■□□□□ 0.11
COL18A1-203ENST00000359759 RPL10LQ96L21 214 aaKnown RBP15.73■□□□□ 0.11
COL18A1-203ENST00000359759 TTPALQ9BTX7 342 aa15.73■□□□□ 0.11
COL18A1-203ENST00000359759 CALML5Q9NZT1 146 aa15.73■□□□□ 0.11
COL18A1-203ENST00000359759 GSKIPQ9P0R6 139 aa15.73■□□□□ 0.11
COL18A1-203ENST00000359759 FAM198AQ9UFP1 575 aa15.73■□□□□ 0.11
COL18A1-203ENST00000359759 RPL36Q9Y3U8 105 aaKnown RBP15.73■□□□□ 0.11
COL18A1-203ENST00000359759 TLR4O00206 839 aa15.72■□□□□ 0.11
COL18A1-203ENST00000359759 INSIG1O15503 277 aa15.72■□□□□ 0.11
COL18A1-203ENST00000359759 PRKCGP05129 697 aa15.72■□□□□ 0.11
COL18A1-203ENST00000359759 FNTBP49356 437 aa15.72■□□□□ 0.11
COL18A1-203ENST00000359759 PLPPR4Q7Z2D5 763 aa15.72■□□□□ 0.11
COL18A1-203ENST00000359759 CNDP2Q96KP4 475 aaKnown RBP15.72■□□□□ 0.11
COL18A1-203ENST00000359759 DUSP26Q9BV47 211 aa15.72■□□□□ 0.11
COL18A1-203ENST00000359759 NUDT15Q9NV35 164 aa15.72■□□□□ 0.11
COL18A1-203ENST00000359759 C1orf109Q9NX04 203 aa15.72■□□□□ 0.11
COL18A1-203ENST00000359759 VNN3Q9NY84 501 aa15.72■□□□□ 0.11
COL18A1-203ENST00000359759 NRXN1Q9ULB1 1477 aa15.72■□□□□ 0.11
COL18A1-203ENST00000359759 BAZ2BQ9UIF8 2168 aaKnown RBP15.72■□□□□ 0.11
COL18A1-203ENST00000359759 KLRG2A4D1S0 409 aaPredicted RBP15.72■□□□□ 0.11
COL18A1-203ENST00000359759 ITM2AO43736 263 aa15.72■□□□□ 0.11
COL18A1-203ENST00000359759 CREB1P16220 341 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms