RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 H3BNH8 94 aa10.91□□□□□ -0.66
SSU72-202ENST00000359060 PLOD2O00469 737 aa10.91□□□□□ -0.66
SSU72-202ENST00000359060 LEFTY1O75610 366 aa10.91□□□□□ -0.66
SSU72-202ENST00000359060 VNN2O95498 520 aa10.91□□□□□ -0.66
SSU72-202ENST00000359060 HTR1EP28566 365 aa10.91□□□□□ -0.66
SSU72-202ENST00000359060 GRIA2P42262 883 aa10.91□□□□□ -0.66
SSU72-202ENST00000359060 ZDHHC20Q5W0Z9 365 aa10.91□□□□□ -0.66
SSU72-202ENST00000359060 GAREM2Q75VX8 874 aa10.91□□□□□ -0.66
SSU72-202ENST00000359060 ARL10Q8N8L6 244 aa10.91□□□□□ -0.66
SSU72-202ENST00000359060 SCRN2Q96FV2 425 aa10.91□□□□□ -0.66
SSU72-202ENST00000359060 MUS81Q96NY9 551 aa10.91□□□□□ -0.66
SSU72-202ENST00000359060 RASSF1Q9NS23 344 aa10.91□□□□□ -0.66
SSU72-202ENST00000359060 ARMC1Q9NVT9 282 aa10.91□□□□□ -0.66
SSU72-202ENST00000359060 ADPRHL2Q9NX46 363 aa10.91□□□□□ -0.66
SSU72-202ENST00000359060 IFT80Q9P2H3 777 aaPredicted RBP10.91□□□□□ -0.66
SSU72-202ENST00000359060 TBC1D14Q9P2M4 693 aa10.91□□□□□ -0.66
SSU72-202ENST00000359060 PADI4Q9UM07 663 aa10.91□□□□□ -0.66
SSU72-202ENST00000359060 GMPPBQ9Y5P6 360 aa10.91□□□□□ -0.66
SSU72-202ENST00000359060 MAGED1Q9Y5V3 778 aaPredicted RBP10.91□□□□□ -0.66
SSU72-202ENST00000359060 SCN4AP35499 1836 aa10.91□□□□□ -0.66
SSU72-202ENST00000359060 F5P12259 2224 aa10.91□□□□□ -0.66
SSU72-202ENST00000359060 H3BNC9 293 aa10.91□□□□□ -0.66
SSU72-202ENST00000359060 SLC9A3R1O14745 358 aaPredicted RBP10.91□□□□□ -0.66
SSU72-202ENST00000359060 FAM20BO75063 409 aa10.91□□□□□ -0.66
SSU72-202ENST00000359060 GBAP04062 536 aa10.91□□□□□ -0.66
SSU72-202ENST00000359060 IDH2P48735 452 aaKnown RBP10.91□□□□□ -0.66
SSU72-202ENST00000359060 SELPLGQ14242 412 aa10.91□□□□□ -0.66
SSU72-202ENST00000359060 AAK1Q2M2I8 961 aa10.91□□□□□ -0.66
SSU72-202ENST00000359060 SBSNQ6UWP8 590 aa10.91□□□□□ -0.66
SSU72-202ENST00000359060 ZNF557Q8N988 423 aaPredicted RBP10.91□□□□□ -0.66
SSU72-202ENST00000359060 LEMD2Q8NC56 503 aa10.91□□□□□ -0.66
SSU72-202ENST00000359060 FIBINQ8TAL6 211 aa10.91□□□□□ -0.66
SSU72-202ENST00000359060 HM13Q8TCT9 377 aa10.91□□□□□ -0.66
SSU72-202ENST00000359060 RORBQ92753 470 aa10.91□□□□□ -0.66
SSU72-202ENST00000359060 MAGED4Q96JG8 741 aa10.91□□□□□ -0.66
SSU72-202ENST00000359060 CWH43Q9H720 699 aa10.91□□□□□ -0.66
SSU72-202ENST00000359060 DNAJB9Q9UBS3 223 aa10.91□□□□□ -0.66
SSU72-202ENST00000359060 RAPGEFL1Q9UHV5 662 aa10.91□□□□□ -0.66
SSU72-202ENST00000359060 PDE10AQ9Y233 779 aa10.91□□□□□ -0.66
SSU72-202ENST00000359060 ERN1O75460 977 aaKnown RBP10.91□□□□□ -0.66
SSU72-202ENST00000359060 BDKRB1P46663 353 aa10.91□□□□□ -0.66
SSU72-202ENST00000359060 ARSFP54793 590 aa10.91□□□□□ -0.66
SSU72-202ENST00000359060 CYP4F2P78329 520 aa10.91□□□□□ -0.66
SSU72-202ENST00000359060 NTHL1P78549 312 aa10.91□□□□□ -0.66
SSU72-202ENST00000359060 CAP1Q01518 475 aa10.91□□□□□ -0.66
SSU72-202ENST00000359060 EPS8Q12929 822 aa10.91□□□□□ -0.66
SSU72-202ENST00000359060 CCNYL2Q5T2Q4 361 aa10.91□□□□□ -0.66
SSU72-202ENST00000359060 PLD3Q8IV08 490 aa10.91□□□□□ -0.66
SSU72-202ENST00000359060 ZC3H7AQ8IWR0 971 aaKnown RBP10.91□□□□□ -0.66
SSU72-202ENST00000359060 KLHDC8BQ8IXV7 354 aa10.91□□□□□ -0.66
SSU72-202ENST00000359060 CSGALNACT1Q8TDX6 532 aa10.91□□□□□ -0.66
SSU72-202ENST00000359060 TIFAQ96CG3 184 aa10.91□□□□□ -0.66
SSU72-202ENST00000359060 CEP295NLQ96MC4 621 aa10.91□□□□□ -0.66
SSU72-202ENST00000359060 CD320Q9NPF0 282 aa10.91□□□□□ -0.66
SSU72-202ENST00000359060 CEP350Q5VT06 3117 aa10.91□□□□□ -0.66
SSU72-202ENST00000359060 PER2O15055 1255 aa10.91□□□□□ -0.66
SSU72-202ENST00000359060 CREG1O75629 220 aa10.91□□□□□ -0.66
SSU72-202ENST00000359060 IL7RP16871 459 aa10.91□□□□□ -0.66
SSU72-202ENST00000359060 IL12AP29459 219 aa10.91□□□□□ -0.66
SSU72-202ENST00000359060 TTKP33981 857 aa10.91□□□□□ -0.66
SSU72-202ENST00000359060 WASP42768 502 aa10.91□□□□□ -0.66
SSU72-202ENST00000359060 COQ5Q5HYK3 327 aa10.91□□□□□ -0.66
SSU72-202ENST00000359060 ENPP6Q6UWR7 440 aa10.91□□□□□ -0.66
SSU72-202ENST00000359060 GALNT10Q86SR1 603 aa10.91□□□□□ -0.66
SSU72-202ENST00000359060 SUSD6Q92537 303 aa10.91□□□□□ -0.66
SSU72-202ENST00000359060 IRF7Q92985 503 aa10.91□□□□□ -0.66
SSU72-202ENST00000359060 RBM4BQ9BQ04 359 aaKnown RBP10.91□□□□□ -0.66
SSU72-202ENST00000359060 RBM4Q9BWF3 364 aaKnown RBP10.91□□□□□ -0.66
SSU72-202ENST00000359060 SLC46A2Q9BY10 475 aa10.91□□□□□ -0.66
SSU72-202ENST00000359060 REXO4Q9GZR2 422 aaKnown RBP10.91□□□□□ -0.66
SSU72-202ENST00000359060 OR2AG1Q9H205 316 aa10.91□□□□□ -0.66
SSU72-202ENST00000359060 VPS29Q9UBQ0 182 aa10.91□□□□□ -0.66
SSU72-202ENST00000359060 RPS6KA6Q9UK32 745 aa10.91□□□□□ -0.66
SSU72-202ENST00000359060 SLC13A4Q9UKG4 626 aa10.91□□□□□ -0.66
SSU72-202ENST00000359060 VPS4AQ9UN37 437 aa10.91□□□□□ -0.66
SSU72-202ENST00000359060 CLIC1O00299 241 aa10.9□□□□□ -0.66
SSU72-202ENST00000359060 QSOX1O00391 747 aa10.9□□□□□ -0.66
SSU72-202ENST00000359060 OR7A17O14581 309 aa10.9□□□□□ -0.66
SSU72-202ENST00000359060 ABLIM3O94929 683 aa10.9□□□□□ -0.66
SSU72-202ENST00000359060 F11P03951 625 aa10.9□□□□□ -0.66
SSU72-202ENST00000359060 IGFBP5P24593 272 aa10.9□□□□□ -0.66
SSU72-202ENST00000359060 ELK4P28324 431 aa10.9□□□□□ -0.66
SSU72-202ENST00000359060 HLA-FP30511 346 aa10.9□□□□□ -0.66
SSU72-202ENST00000359060 DGKGP49619 791 aa10.9□□□□□ -0.66
SSU72-202ENST00000359060 HKDC1Q2TB90 917 aa10.9□□□□□ -0.66
SSU72-202ENST00000359060 HMBOX1Q6NT76 420 aa10.9□□□□□ -0.66
SSU72-202ENST00000359060 PATL1Q86TB9 770 aaKnown RBP10.9□□□□□ -0.66
SSU72-202ENST00000359060 TRMT2BQ96GJ1 504 aaKnown RBP10.9□□□□□ -0.66
SSU72-202ENST00000359060 ARMC7Q9H6L4 198 aa10.9□□□□□ -0.66
SSU72-202ENST00000359060 C8orf4Q9NR00 106 aa10.9□□□□□ -0.66
SSU72-202ENST00000359060 CNOT11Q9UKZ1 510 aaKnown RBP10.9□□□□□ -0.66
SSU72-202ENST00000359060 SAMD4AQ9UPU9 718 aaKnown RBP10.9□□□□□ -0.66
SSU72-202ENST00000359060 LRRC37A2A6NM11 1700 aa10.9□□□□□ -0.66
SSU72-202ENST00000359060 SYNDIG1LA6NDD5 238 aa10.9□□□□□ -0.66
SSU72-202ENST00000359060 MAGEB17A8MXT2 336 aa10.9□□□□□ -0.66
SSU72-202ENST00000359060 GPC1P35052 558 aa10.9□□□□□ -0.66
SSU72-202ENST00000359060 TRAF3Q13114 568 aa10.9□□□□□ -0.66
SSU72-202ENST00000359060 ATP6AP1Q15904 470 aa10.9□□□□□ -0.66
SSU72-202ENST00000359060 GRASPQ7Z6J2 395 aaPredicted RBP10.9□□□□□ -0.66
SSU72-202ENST00000359060 C11orf74Q86VG3 221 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms