RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 C11orf98E9PRG8 122 aa9.59□□□□□ -0.87
CHD3-202ENST00000358181 LATS1O95835 1130 aa9.59□□□□□ -0.87
CHD3-202ENST00000358181 EIF4EP06730 217 aaKnown RBP9.59□□□□□ -0.87
CHD3-202ENST00000358181 ACP5P13686 325 aa9.59□□□□□ -0.87
CHD3-202ENST00000358181 DCKP27707 260 aa9.59□□□□□ -0.87
CHD3-202ENST00000358181 MAGEA6P43360 314 aa9.59□□□□□ -0.87
CHD3-202ENST00000358181 SCTRP47872 440 aa9.59□□□□□ -0.87
CHD3-202ENST00000358181 RPL14P50914 215 aaKnown RBP9.59□□□□□ -0.87
CHD3-202ENST00000358181 UBAP2LQ14157 1087 aaKnown RBP9.59□□□□□ -0.87
CHD3-202ENST00000358181 PCID2Q5JVF3 399 aa9.59□□□□□ -0.87
CHD3-202ENST00000358181 MFSD2AQ8NA29 543 aa9.59□□□□□ -0.87
CHD3-202ENST00000358181 FTHL17Q9BXU8 183 aa9.59□□□□□ -0.87
CHD3-202ENST00000358181 MKKSQ9NPJ1 570 aaPredicted RBP9.59□□□□□ -0.87
CHD3-202ENST00000358181 DNAAF2Q9NVR5 837 aaKnown RBP9.59□□□□□ -0.87
CHD3-202ENST00000358181 ZNF451Q9Y4E5 1061 aa9.59□□□□□ -0.87
CHD3-202ENST00000358181 RARRES1P49788 294 aa9.58□□□□□ -0.88
CHD3-202ENST00000358181 ELP6Q0PNE2 266 aa9.58□□□□□ -0.88
CHD3-202ENST00000358181 RAET1LQ5VY80 246 aa9.58□□□□□ -0.88
CHD3-202ENST00000358181 AMIGO2Q86SJ2 522 aa9.58□□□□□ -0.88
CHD3-202ENST00000358181 C12orf29Q8N999 325 aa9.58□□□□□ -0.88
CHD3-202ENST00000358181 GOLM1Q8NBJ4 401 aa9.58□□□□□ -0.88
CHD3-202ENST00000358181 SLC16A10Q8TF71 515 aa9.58□□□□□ -0.88
CHD3-202ENST00000358181 AUTS2Q8WXX7 1259 aa9.58□□□□□ -0.88
CHD3-202ENST00000358181 CLP1Q92989 425 aaKnown RBP9.58□□□□□ -0.88
CHD3-202ENST00000358181 CAVIN3Q969G5 261 aa9.58□□□□□ -0.88
CHD3-202ENST00000358181 B3GALT6Q96L58 329 aa9.58□□□□□ -0.88
CHD3-202ENST00000358181 LACRTQ9GZZ8 138 aa9.58□□□□□ -0.88
CHD3-202ENST00000358181 TAS2R14Q9NYV8 317 aa9.58□□□□□ -0.88
CHD3-202ENST00000358181 CYP8B1Q9UNU6 501 aa9.58□□□□□ -0.88
CHD3-202ENST00000358181 ICKQ9UPZ9 632 aa9.58□□□□□ -0.88
CHD3-202ENST00000358181 C2CD2Q9Y426 696 aa9.58□□□□□ -0.88
CHD3-202ENST00000358181 AP4B1Q9Y6B7 739 aa9.58□□□□□ -0.88
CHD3-202ENST00000358181 KIF20BQ96Q89 1820 aa9.58□□□□□ -0.88
CHD3-202ENST00000358181 METTL21EPA6NDL7 271 aa9.58□□□□□ -0.88
CHD3-202ENST00000358181 EPHA1P21709 976 aa9.58□□□□□ -0.88
CHD3-202ENST00000358181 GLP1RP43220 463 aa9.58□□□□□ -0.88
CHD3-202ENST00000358181 S100A12P80511 92 aa9.58□□□□□ -0.88
CHD3-202ENST00000358181 RGS21Q2M5E4 152 aa9.58□□□□□ -0.88
CHD3-202ENST00000358181 RHBDF2Q6PJF5 856 aa9.58□□□□□ -0.88
CHD3-202ENST00000358181 RBFAQ8N0V3 343 aa9.58□□□□□ -0.88
CHD3-202ENST00000358181 DCBLD1Q8N8Z6 715 aa9.58□□□□□ -0.88
CHD3-202ENST00000358181 SIDT2Q8NBJ9 832 aaKnown RBP9.58□□□□□ -0.88
CHD3-202ENST00000358181 PHOSPHO1Q8TCT1 267 aa9.58□□□□□ -0.88
CHD3-202ENST00000358181 TTPALQ9BTX7 342 aa9.58□□□□□ -0.88
CHD3-202ENST00000358181 ISCUQ9H1K1 167 aa9.58□□□□□ -0.88
CHD3-202ENST00000358181 C1orf21Q9H246 121 aa9.58□□□□□ -0.88
CHD3-202ENST00000358181 MAN2C1Q9NTJ4 1040 aa9.58□□□□□ -0.88
CHD3-202ENST00000358181 F8VP50 259 aa9.58□□□□□ -0.88
CHD3-202ENST00000358181 ALPPP05187 535 aa9.58□□□□□ -0.88
CHD3-202ENST00000358181 OR2B6P58173 313 aa9.58□□□□□ -0.88
CHD3-202ENST00000358181 DLG2Q15700 870 aa9.58□□□□□ -0.88
CHD3-202ENST00000358181 ANKRD46Q86W74 232 aa9.58□□□□□ -0.88
CHD3-202ENST00000358181 GPC2Q8N158 579 aa9.58□□□□□ -0.88
CHD3-202ENST00000358181 DAGLBQ8NCG7 672 aa9.58□□□□□ -0.88
CHD3-202ENST00000358181 CASTOR1Q8WTX7 329 aa9.58□□□□□ -0.88
CHD3-202ENST00000358181 ANKRD27Q96NW4 1050 aa9.58□□□□□ -0.88
CHD3-202ENST00000358181 GIN1Q9NXP7 522 aa9.58□□□□□ -0.88
CHD3-202ENST00000358181 LEF1Q9UJU2 399 aaPredicted RBP9.58□□□□□ -0.88
CHD3-202ENST00000358181 FGF10O15520 208 aaPredicted RBP9.58□□□□□ -0.88
CHD3-202ENST00000358181 SHOX2O60902 331 aaPredicted RBP9.58□□□□□ -0.88
CHD3-202ENST00000358181 LAG3P18627 525 aa9.58□□□□□ -0.88
CHD3-202ENST00000358181 UBE2NP61088 152 aaKnown RBP9.58□□□□□ -0.88
CHD3-202ENST00000358181 GALNT10Q86SR1 603 aa9.58□□□□□ -0.88
CHD3-202ENST00000358181 GKN2Q86XP6 184 aa9.58□□□□□ -0.88
CHD3-202ENST00000358181 ZNF283Q8N7M2 679 aa9.58□□□□□ -0.88
CHD3-202ENST00000358181 THOC3Q96J01 351 aaKnown RBP9.58□□□□□ -0.88
CHD3-202ENST00000358181 SGCZQ96LD1 299 aa9.58□□□□□ -0.88
CHD3-202ENST00000358181 TMBIM4Q9HC24 238 aa9.58□□□□□ -0.88
CHD3-202ENST00000358181 ADAM28Q9UKQ2 775 aa9.58□□□□□ -0.88
CHD3-202ENST00000358181 CD2P06729 351 aa9.58□□□□□ -0.88
CHD3-202ENST00000358181 GJA5P36382 358 aa9.58□□□□□ -0.88
CHD3-202ENST00000358181 FXYD6P3P58550 94 aa9.58□□□□□ -0.88
CHD3-202ENST00000358181 MAPK7Q13164 816 aa9.58□□□□□ -0.88
CHD3-202ENST00000358181 MPPED2Q15777 294 aa9.58□□□□□ -0.88
CHD3-202ENST00000358181 PHC3Q8NDX5 983 aa9.58□□□□□ -0.88
CHD3-202ENST00000358181 OR8K3Q8NH51 312 aa9.58□□□□□ -0.88
CHD3-202ENST00000358181 HDAC10Q969S8 669 aa9.58□□□□□ -0.88
CHD3-202ENST00000358181 SP140LQ9H930 580 aa9.58□□□□□ -0.88
CHD3-202ENST00000358181 ARHGAP20Q9P2F6 1191 aa9.58□□□□□ -0.88
CHD3-202ENST00000358181 C2orf92A0A1B0GVN3 265 aa9.58□□□□□ -0.88
CHD3-202ENST00000358181 IRGMA1A4Y4 181 aa9.58□□□□□ -0.88
CHD3-202ENST00000358181 AP5Z1O43299 807 aa9.58□□□□□ -0.88
CHD3-202ENST00000358181 MFSD11O43934 449 aa9.58□□□□□ -0.88
CHD3-202ENST00000358181 SNRPB2P08579 225 aaKnown RBP9.58□□□□□ -0.88
CHD3-202ENST00000358181 RPL17P18621 184 aaKnown RBP9.58□□□□□ -0.88
CHD3-202ENST00000358181 NR2C2P49116 596 aa9.58□□□□□ -0.88
CHD3-202ENST00000358181 IRAK1P51617 712 aa9.58□□□□□ -0.88
CHD3-202ENST00000358181 PRR5P85299 388 aa9.58□□□□□ -0.88
CHD3-202ENST00000358181 RBM48Q5RL73 367 aaKnown RBP9.58□□□□□ -0.88
CHD3-202ENST00000358181 FAM69BQ5VUD6 431 aa9.58□□□□□ -0.88
CHD3-202ENST00000358181 CEP76Q8TAP6 659 aa9.58□□□□□ -0.88
CHD3-202ENST00000358181 ZNF606Q8WXB4 792 aa9.58□□□□□ -0.88
CHD3-202ENST00000358181 SLC25A44Q96H78 314 aaPredicted RBP9.58□□□□□ -0.88
CHD3-202ENST00000358181 MMADHCQ9H3L0 296 aaPredicted RBP9.58□□□□□ -0.88
CHD3-202ENST00000358181 ADAMTS13Q76LX8 1427 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 SH3PXD2BA1X283 911 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 hCG_2039718K7EN88 272 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 TNFRSF11BO00300 401 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 B4GALT5O43286 388 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 C1RP00736 705 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms