RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 OGFRQ9NZT2 677 aa24.61■■□□□ 1.53
SSBP3-202ENST00000357475 SNRNP200O75643 2136 aaKnown RBP24.6■■□□□ 1.53
SSBP3-202ENST00000357475 SYCE1LA8MT33 242 aa24.6■■□□□ 1.53
SSBP3-202ENST00000357475 A8MT66 165 aa24.6■■□□□ 1.53
SSBP3-202ENST00000357475 BTN3A3O00478 584 aa24.6■■□□□ 1.53
SSBP3-202ENST00000357475 SIX3O95343 332 aaPredicted RBP24.6■■□□□ 1.53
SSBP3-202ENST00000357475 LDOC1O95751 146 aaPredicted RBP24.6■■□□□ 1.53
SSBP3-202ENST00000357475 ANXA5P08758 320 aa24.6■■□□□ 1.53
SSBP3-202ENST00000357475 CKMT1AP12532 417 aa24.6■■□□□ 1.53
SSBP3-202ENST00000357475 TYRP1P17643 537 aa24.6■■□□□ 1.53
SSBP3-202ENST00000357475 KCNA4P22459 653 aa24.6■■□□□ 1.53
SSBP3-202ENST00000357475 GDF5P43026 501 aa24.6■■□□□ 1.53
SSBP3-202ENST00000357475 RAB28P51157 221 aa24.6■■□□□ 1.53
SSBP3-202ENST00000357475 PNLIPRP1P54315 467 aa24.6■■□□□ 1.53
SSBP3-202ENST00000357475 WDR4P57081 412 aaKnown RBP24.6■■□□□ 1.53
SSBP3-202ENST00000357475 PCLAFQ15004 111 aa24.6■■□□□ 1.53
SSBP3-202ENST00000357475 INAVAQ3KP66 663 aa24.6■■□□□ 1.53
SSBP3-202ENST00000357475 HSP90B2PQ58FF3 399 aa24.6■■□□□ 1.53
SSBP3-202ENST00000357475 AGTRAPQ6RW13 159 aa24.6■■□□□ 1.53
SSBP3-202ENST00000357475 ZYG11AQ6WRX3 759 aa24.6■■□□□ 1.53
SSBP3-202ENST00000357475 AMIGO1Q86WK6 493 aa24.6■■□□□ 1.53
SSBP3-202ENST00000357475 PTGR2Q8N8N7 351 aaPredicted RBP24.6■■□□□ 1.53
SSBP3-202ENST00000357475 BAHD1Q8TBE0 780 aaPredicted RBP24.6■■□□□ 1.53
SSBP3-202ENST00000357475 ZFPM2Q8WW38 1151 aa24.6■■□□□ 1.53
SSBP3-202ENST00000357475 PYCR2Q96C36 320 aa24.6■■□□□ 1.53
SSBP3-202ENST00000357475 PKNOX2Q96KN3 472 aa24.6■■□□□ 1.53
SSBP3-202ENST00000357475 STN1Q9H668 368 aaKnown RBP24.6■■□□□ 1.53
SSBP3-202ENST00000357475 COPG2Q9UBF2 871 aa24.6■■□□□ 1.53
SSBP3-202ENST00000357475 PTBP2Q9UKA9 531 aaKnown RBP24.6■■□□□ 1.53
SSBP3-202ENST00000357475 CCDC189A1A4V9 331 aa24.59■■□□□ 1.53
SSBP3-202ENST00000357475 EME2A4GXA9 379 aaPredicted RBP24.59■■□□□ 1.53
SSBP3-202ENST00000357475 B4GAT1O43505 415 aa24.59■■□□□ 1.53
SSBP3-202ENST00000357475 FOXD2O60548 495 aaPredicted RBP24.59■■□□□ 1.53
SSBP3-202ENST00000357475 ZWINTO95229 277 aa24.59■■□□□ 1.53
SSBP3-202ENST00000357475 GFAPP14136 432 aa24.59■■□□□ 1.53
SSBP3-202ENST00000357475 CPA3P15088 417 aa24.59■■□□□ 1.53
SSBP3-202ENST00000357475 PEBP1P30086 187 aaKnown RBP24.59■■□□□ 1.53
SSBP3-202ENST00000357475 DAB2P98082 770 aa24.59■■□□□ 1.53
SSBP3-202ENST00000357475 PCM1Q15154 2024 aa24.59■■□□□ 1.53
SSBP3-202ENST00000357475 CYP2A13Q16696 494 aa24.59■■□□□ 1.53
SSBP3-202ENST00000357475 NKAIN2Q5VXU1 208 aa24.59■■□□□ 1.53
SSBP3-202ENST00000357475 SUSD1Q6UWL2 747 aa24.59■■□□□ 1.53
SSBP3-202ENST00000357475 EFL1Q7Z2Z2 1120 aaKnown RBP24.59■■□□□ 1.53
SSBP3-202ENST00000357475 RBM12BQ8IXT5 1001 aaKnown RBP24.59■■□□□ 1.53
SSBP3-202ENST00000357475 FBXO39Q8N4B4 442 aa24.59■■□□□ 1.53
SSBP3-202ENST00000357475 RSC1A1Q92681 617 aa24.59■■□□□ 1.53
SSBP3-202ENST00000357475 SRMSQ9H3Y6 488 aa24.59■■□□□ 1.53
SSBP3-202ENST00000357475 UCK1Q9HA47 277 aa24.59■■□□□ 1.53
SSBP3-202ENST00000357475 ABCF3Q9NUQ8 709 aa24.59■■□□□ 1.53
SSBP3-202ENST00000357475 SPHK1Q9NYA1 384 aa24.59■■□□□ 1.53
SSBP3-202ENST00000357475 SPATA7Q9P0W8 599 aa24.59■■□□□ 1.53
SSBP3-202ENST00000357475 PABPN1LA6NDY0 278 aaKnown RBP24.58■■□□□ 1.53
SSBP3-202ENST00000357475 E7ENX8 843 aa24.58■■□□□ 1.53
SSBP3-202ENST00000357475 TM9SF1O15321 606 aa24.58■■□□□ 1.53
SSBP3-202ENST00000357475 MYL2P10916 166 aa24.58■■□□□ 1.53
SSBP3-202ENST00000357475 ALDH4A1P30038 563 aa24.58■■□□□ 1.53
SSBP3-202ENST00000357475 HSPA7P48741 367 aa24.58■■□□□ 1.53
SSBP3-202ENST00000357475 PPP1CAP62136 330 aa24.58■■□□□ 1.53
SSBP3-202ENST00000357475 PPP2R2AP63151 447 aa24.58■■□□□ 1.53
SSBP3-202ENST00000357475 TAP2Q03519 686 aa24.58■■□□□ 1.53
SSBP3-202ENST00000357475 C10orf107Q8IVU9 208 aa24.58■■□□□ 1.53
SSBP3-202ENST00000357475 SYTL1Q8IYJ3 562 aa24.58■■□□□ 1.53
SSBP3-202ENST00000357475 ADGRF3Q8IZF5 1079 aa24.58■■□□□ 1.53
SSBP3-202ENST00000357475 AVL9Q8NBF6 648 aa24.58■■□□□ 1.53
SSBP3-202ENST00000357475 OR10G6Q8NH81 332 aa24.58■■□□□ 1.53
SSBP3-202ENST00000357475 WWOXQ9NZC7 414 aa24.58■■□□□ 1.53
SSBP3-202ENST00000357475 FTSJ1Q9UET6 329 aa24.58■■□□□ 1.53
SSBP3-202ENST00000357475 A0A1W2PPV9 198 aa24.57■■□□□ 1.52
SSBP3-202ENST00000357475 OR6C74A6NCV1 312 aa24.57■■□□□ 1.52
SSBP3-202ENST00000357475 LILRA5A6NI73 299 aa24.57■■□□□ 1.52
SSBP3-202ENST00000357475 SMIM24O75264 130 aa24.57■■□□□ 1.52
SSBP3-202ENST00000357475 S100BP04271 92 aaPredicted RBP24.57■■□□□ 1.52
SSBP3-202ENST00000357475 DHRS4L1P0CG22 281 aa24.57■■□□□ 1.52
SSBP3-202ENST00000357475 NR1D1P20393 614 aa24.57■■□□□ 1.52
SSBP3-202ENST00000357475 ALDH3A1P30838 453 aa24.57■■□□□ 1.52
SSBP3-202ENST00000357475 SHMT2P34897 504 aa24.57■■□□□ 1.52
SSBP3-202ENST00000357475 NAE1Q13564 534 aa24.57■■□□□ 1.52
SSBP3-202ENST00000357475 TSTA3Q13630 321 aaPredicted RBP24.57■■□□□ 1.52
SSBP3-202ENST00000357475 NR1D2Q14995 579 aa24.57■■□□□ 1.52
SSBP3-202ENST00000357475 SETDB1Q15047 1291 aa24.57■■□□□ 1.52
SSBP3-202ENST00000357475 ANKS6Q68DC2 871 aa24.57■■□□□ 1.52
SSBP3-202ENST00000357475 SULT1C3Q6IMI6 304 aa24.57■■□□□ 1.52
SSBP3-202ENST00000357475 RPS27LQ71UM5 84 aaKnown RBP24.57■■□□□ 1.52
SSBP3-202ENST00000357475 OR2L8Q8NGY9 312 aa24.57■■□□□ 1.52
SSBP3-202ENST00000357475 IFI44Q8TCB0 444 aa24.57■■□□□ 1.52
SSBP3-202ENST00000357475 SH3KBP1Q96B97 665 aa24.57■■□□□ 1.52
SSBP3-202ENST00000357475 MED8Q96G25 268 aa24.57■■□□□ 1.52
SSBP3-202ENST00000357475 KCNK4Q9NYG8 393 aa24.57■■□□□ 1.52
SSBP3-202ENST00000357475 NCKIPSDQ9NZQ3 722 aa24.57■■□□□ 1.52
SSBP3-202ENST00000357475 WDR91A4D1P6 747 aa24.56■■□□□ 1.52
SSBP3-202ENST00000357475 UBXN7O94888 489 aa24.56■■□□□ 1.52
SSBP3-202ENST00000357475 ATP5F1P24539 256 aaPredicted RBP24.56■■□□□ 1.52
SSBP3-202ENST00000357475 PSMB5P28074 263 aa24.56■■□□□ 1.52
SSBP3-202ENST00000357475 SLC18A1P54219 525 aa24.56■■□□□ 1.52
SSBP3-202ENST00000357475 ALDH18A1P54886 795 aaKnown RBP24.56■■□□□ 1.52
SSBP3-202ENST00000357475 TBPL1P62380 186 aa24.56■■□□□ 1.52
SSBP3-202ENST00000357475 YBX1P67809 324 aaKnown RBP24.56■■□□□ 1.52
SSBP3-202ENST00000357475 GPS2Q13227 327 aa24.56■■□□□ 1.52
SSBP3-202ENST00000357475 PTCHD3Q3KNS1 767 aa24.56■■□□□ 1.52
SSBP3-202ENST00000357475 SPRED1Q7Z699 444 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms