RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 PSRC1Q6PGN9 363 aaPredicted RBP12.61□□□□□ -0.39
SMC4-202ENST00000357388 PDSS2Q86YH6 399 aa12.61□□□□□ -0.39
SMC4-202ENST00000357388 TSNAXQ99598 290 aaKnown RBP12.61□□□□□ -0.39
SMC4-202ENST00000357388 SEZ6LQ9BYH1 1024 aa12.61□□□□□ -0.39
SMC4-202ENST00000357388 ACTR6Q9GZN1 396 aa12.61□□□□□ -0.39
SMC4-202ENST00000357388 ABCG8Q9H221 673 aa12.61□□□□□ -0.39
SMC4-202ENST00000357388 TCAF1Q9Y4C2 921 aa12.61□□□□□ -0.39
SMC4-202ENST00000357388 RIC1Q4ADV7 1423 aa12.61□□□□□ -0.39
SMC4-202ENST00000357388 TTC34A8MYJ7 566 aa12.61□□□□□ -0.39
SMC4-202ENST00000357388 NOBOXO60393 691 aa12.61□□□□□ -0.39
SMC4-202ENST00000357388 MAPK3P27361 379 aaPredicted RBP12.61□□□□□ -0.39
SMC4-202ENST00000357388 YAP1P46937 504 aaKnown RBP12.61□□□□□ -0.39
SMC4-202ENST00000357388 UBAP2Q5T6F2 1119 aaKnown RBP12.61□□□□□ -0.39
SMC4-202ENST00000357388 ANKRD23Q86SG2 305 aa12.61□□□□□ -0.39
SMC4-202ENST00000357388 TMPRSS11BQ86T26 416 aa12.61□□□□□ -0.39
SMC4-202ENST00000357388 CAND1Q86VP6 1230 aaKnown RBP12.61□□□□□ -0.39
SMC4-202ENST00000357388 ZNF227Q86WZ6 799 aa12.61□□□□□ -0.39
SMC4-202ENST00000357388 ZFPM1Q8IX07 1006 aa12.61□□□□□ -0.39
SMC4-202ENST00000357388 CD300LFQ8TDQ1 290 aa12.61□□□□□ -0.39
SMC4-202ENST00000357388 SLC35G5Q96KT7 338 aa12.61□□□□□ -0.39
SMC4-202ENST00000357388 PURBQ96QR8 312 aaKnown RBP12.61□□□□□ -0.39
SMC4-202ENST00000357388 GATA5Q9BWX5 397 aaPredicted RBP12.61□□□□□ -0.39
SMC4-202ENST00000357388 NDUFAF4Q9P032 175 aa12.61□□□□□ -0.39
SMC4-202ENST00000357388 SCP2D1Q9UJQ7 156 aa12.61□□□□□ -0.39
SMC4-202ENST00000357388 HCN2Q9UL51 889 aa12.61□□□□□ -0.39
SMC4-202ENST00000357388 PRKAB1Q9Y478 270 aa12.61□□□□□ -0.39
SMC4-202ENST00000357388 GLYATL1P3A0A0U1RQE8 302 aa12.61□□□□□ -0.39
SMC4-202ENST00000357388 EPHB6O15197 1021 aa12.61□□□□□ -0.39
SMC4-202ENST00000357388 CTPS1P17812 591 aa12.61□□□□□ -0.39
SMC4-202ENST00000357388 TAS2R50P59544 299 aa12.61□□□□□ -0.39
SMC4-202ENST00000357388 RPS14P62263 151 aaKnown RBP12.61□□□□□ -0.39
SMC4-202ENST00000357388 SHQ1Q6PI26 577 aaKnown RBP12.61□□□□□ -0.39
SMC4-202ENST00000357388 PLEKHO2Q8TD55 490 aa12.61□□□□□ -0.39
SMC4-202ENST00000357388 FAM84AQ96KN4 292 aa12.61□□□□□ -0.39
SMC4-202ENST00000357388 BTN2A3PQ96KV6 586 aa12.61□□□□□ -0.39
SMC4-202ENST00000357388 PCBD2Q9H0N5 130 aa12.61□□□□□ -0.39
SMC4-202ENST00000357388 TAS2R3Q9NYW6 316 aa12.61□□□□□ -0.39
SMC4-202ENST00000357388 CLTCL1P53675 1640 aa12.6□□□□□ -0.39
SMC4-202ENST00000357388 SH3D21A4FU49 640 aa12.6□□□□□ -0.39
SMC4-202ENST00000357388 C8GP07360 202 aa12.6□□□□□ -0.39
SMC4-202ENST00000357388 ZNF3P17036 446 aa12.6□□□□□ -0.39
SMC4-202ENST00000357388 TARDBPQ13148 414 aaKnown RBP eCLIP12.6□□□□□ -0.393e-6■■■■□ 21.4
SMC4-202ENST00000357388 PTGR1Q14914 329 aa12.6□□□□□ -0.39
SMC4-202ENST00000357388 EARS2Q5JPH6 523 aaKnown RBP12.6□□□□□ -0.39
SMC4-202ENST00000357388 APOBEC3HQ6NTF7 200 aaKnown RBP12.6□□□□□ -0.39
SMC4-202ENST00000357388 GPR153Q6NV75 609 aa12.6□□□□□ -0.39
SMC4-202ENST00000357388 DGLUCYQ7Z3D6 616 aa12.6□□□□□ -0.39
SMC4-202ENST00000357388 KIF18BQ86Y91 864 aa12.6□□□□□ -0.39
SMC4-202ENST00000357388 HID1Q8IV36 788 aa12.6□□□□□ -0.39
SMC4-202ENST00000357388 CADM2Q8N3J6 435 aa12.6□□□□□ -0.39
SMC4-202ENST00000357388 IL12RB2Q99665 862 aa12.6□□□□□ -0.39
SMC4-202ENST00000357388 SLC7A8Q9UHI5 535 aa12.6□□□□□ -0.39
SMC4-202ENST00000357388 SMIM35A0A1B0GVV1 85 aa12.6□□□□□ -0.39
SMC4-202ENST00000357388 IRF6O14896 467 aa12.6□□□□□ -0.39
SMC4-202ENST00000357388 MATN4O95460 622 aa12.6□□□□□ -0.39
SMC4-202ENST00000357388 GDI2P50395 445 aaKnown RBP12.6□□□□□ -0.39
SMC4-202ENST00000357388 CRISP3P54108 245 aa12.6□□□□□ -0.39
SMC4-202ENST00000357388 TMEM53Q6P2H8 277 aa12.6□□□□□ -0.39
SMC4-202ENST00000357388 FAM151BQ6UXP7 276 aa12.6□□□□□ -0.39
SMC4-202ENST00000357388 CYP4V2Q6ZWL3 525 aaPredicted RBP12.6□□□□□ -0.39
SMC4-202ENST00000357388 TOR1AIP2Q8NFQ8 470 aa12.6□□□□□ -0.39
SMC4-202ENST00000357388 OR14K1Q8NGZ2 314 aa12.6□□□□□ -0.39
SMC4-202ENST00000357388 SETD6Q8TBK2 473 aa12.6□□□□□ -0.39
SMC4-202ENST00000357388 AZIN2Q96A70 460 aa12.6□□□□□ -0.39
SMC4-202ENST00000357388 MIPEPQ99797 713 aa12.6□□□□□ -0.39
SMC4-202ENST00000357388 BRD7Q9NPI1 651 aa12.6□□□□□ -0.39
SMC4-202ENST00000357388 NOP16Q9Y3C1 178 aaKnown RBP12.6□□□□□ -0.39
SMC4-202ENST00000357388 CPSF4LA6NMK7 179 aaKnown RBP12.6□□□□□ -0.39
SMC4-202ENST00000357388 PIP5K1BO14986 540 aa12.6□□□□□ -0.39
SMC4-202ENST00000357388 NDST3O95803 873 aa12.6□□□□□ -0.39
SMC4-202ENST00000357388 DNAJB1P25685 340 aa12.6□□□□□ -0.39
SMC4-202ENST00000357388 HSD3B2P26439 372 aa12.6□□□□□ -0.39
SMC4-202ENST00000357388 SPAM1P38567 509 aa12.6□□□□□ -0.39
SMC4-202ENST00000357388 ERVK-8P63133 956 aa12.6□□□□□ -0.39
SMC4-202ENST00000357388 ARFRP1Q13795 201 aa12.6□□□□□ -0.39
SMC4-202ENST00000357388 LRRN1Q6UXK5 716 aa12.6□□□□□ -0.39
SMC4-202ENST00000357388 DNAJC19Q96DA6 116 aa12.6□□□□□ -0.39
SMC4-202ENST00000357388 MYNNQ9NPC7 610 aa12.6□□□□□ -0.39
SMC4-202ENST00000357388 MKKSQ9NPJ1 570 aaPredicted RBP12.6□□□□□ -0.39
SMC4-202ENST00000357388 SPATA7Q9P0W8 599 aa12.6□□□□□ -0.39
SMC4-202ENST00000357388 UBIAD1Q9Y5Z9 338 aa12.6□□□□□ -0.39
SMC4-202ENST00000357388 TEX13CA0A0J9YWL9 993 aa12.6□□□□□ -0.39
SMC4-202ENST00000357388 TMEM88BA6NKF7 163 aa12.6□□□□□ -0.39
SMC4-202ENST00000357388 TBX10O75333 385 aa12.6□□□□□ -0.39
SMC4-202ENST00000357388 ANXA3P12429 323 aa12.6□□□□□ -0.39
SMC4-202ENST00000357388 GNSP15586 552 aa12.6□□□□□ -0.39
SMC4-202ENST00000357388 BMP6P22004 513 aa12.6□□□□□ -0.39
SMC4-202ENST00000357388 CD40LGP29965 261 aa12.6□□□□□ -0.39
SMC4-202ENST00000357388 RPL7AP62424 266 aaKnown RBP12.6□□□□□ -0.39
SMC4-202ENST00000357388 ALG10Q5BKT4 473 aa12.6□□□□□ -0.39
SMC4-202ENST00000357388 NUP54Q7Z3B4 507 aa12.6□□□□□ -0.39
SMC4-202ENST00000357388 METTL25Q8N6Q8 603 aa12.6□□□□□ -0.39
SMC4-202ENST00000357388 BIRC8Q96P09 236 aa12.6□□□□□ -0.39
SMC4-202ENST00000357388 BRINP2Q9C0B6 783 aa12.6□□□□□ -0.39
SMC4-202ENST00000357388 RGCCQ9H4X1 137 aa12.6□□□□□ -0.39
SMC4-202ENST00000357388 RNF6Q9Y252 685 aa12.6□□□□□ -0.39
SMC4-202ENST00000357388 PLEKHA6Q9Y2H5 1048 aa12.6□□□□□ -0.39
SMC4-202ENST00000357388 A0A1B0GVM2 712 aa12.59□□□□□ -0.39
SMC4-202ENST00000357388 TCAF2A6NFQ2 919 aa12.59□□□□□ -0.39
SMC4-202ENST00000357388 LRRN3E7EW58 273 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms