RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 SLC7A13Q8TCU3 470 aa6.45□□□□□ -1.38
VPS13B-202ENST00000357162 DEDD2Q8WXF8 326 aa6.45□□□□□ -1.38
VPS13B-202ENST00000357162 SEMA3CQ99985 751 aa6.45□□□□□ -1.38
VPS13B-202ENST00000357162 TUT1Q9H6E5 874 aaKnown RBP6.45□□□□□ -1.38
VPS13B-202ENST00000357162 EXOSC1Q9Y3B2 195 aaKnown RBP6.45□□□□□ -1.38
VPS13B-202ENST00000357162 SPATA31A1Q5TZJ5 1347 aa6.45□□□□□ -1.38
VPS13B-202ENST00000357162 TBX1O43435 398 aa6.45□□□□□ -1.38
VPS13B-202ENST00000357162 AP1G1O43747 822 aa6.45□□□□□ -1.38
VPS13B-202ENST00000357162 CSTF2P33240 577 aaKnown RBP eCLIP6.45□□□□□ -1.38
VPS13B-202ENST00000357162 CCNIQ14094 377 aa6.45□□□□□ -1.38
VPS13B-202ENST00000357162 ZNF169Q14929 603 aaPredicted RBP6.45□□□□□ -1.38
VPS13B-202ENST00000357162 DNM1P34Q6PK57 102 aa6.45□□□□□ -1.38
VPS13B-202ENST00000357162 ZNF641Q96N77 438 aaPredicted RBP6.45□□□□□ -1.38
VPS13B-202ENST00000357162 TYROBPO43914 113 aa6.45□□□□□ -1.38
VPS13B-202ENST00000357162 H1F0P07305 194 aaKnown RBP6.45□□□□□ -1.38
VPS13B-202ENST00000357162 LDLRAP1Q5SW96 308 aa6.45□□□□□ -1.38
VPS13B-202ENST00000357162 C1orf189Q5VU69 101 aa6.45□□□□□ -1.38
VPS13B-202ENST00000357162 OR14K1Q8NGZ2 314 aa6.45□□□□□ -1.38
VPS13B-202ENST00000357162 RPLP0P6Q8NHW5 317 aa6.45□□□□□ -1.38
VPS13B-202ENST00000357162 NPLOC4Q8TAT6 608 aa6.45□□□□□ -1.38
VPS13B-202ENST00000357162 NACC2Q96BF6 587 aa6.45□□□□□ -1.38
VPS13B-202ENST00000357162 RTP4Q96DX8 246 aa6.45□□□□□ -1.38
VPS13B-202ENST00000357162 ZBED3Q96IU2 234 aaPredicted RBP6.45□□□□□ -1.38
VPS13B-202ENST00000357162 RADILQ96JH8 1075 aa6.45□□□□□ -1.38
VPS13B-202ENST00000357162 AGO3Q9H9G7 860 aaKnown RBP6.45□□□□□ -1.38
VPS13B-202ENST00000357162 BTRCQ9Y297 605 aa6.45□□□□□ -1.38
VPS13B-202ENST00000357162 IFNA21P01568 189 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 CHRNA1P02708 482 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 ZSCAN5DPP0CG00 497 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 DPP6P42658 865 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 MAPK12P53778 367 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 BTN3A2P78410 334 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 IRF5Q13568 498 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 SEC23BQ15437 767 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 GATAD2AQ86YP4 633 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 PLD4Q96BZ4 506 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 PAK1IP1Q9NWT1 392 aaPredicted RBP6.44□□□□□ -1.38
VPS13B-202ENST00000357162 SLC39A1Q9NY26 324 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 CDC40O60508 579 aaKnown RBP eCLIP6.44□□□□□ -1.38
VPS13B-202ENST00000357162 SERPIND1P05546 499 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 XRCC1P18887 633 aaPredicted RBP6.44□□□□□ -1.38
VPS13B-202ENST00000357162 HTR1EP28566 365 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 NCS1P62166 190 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 SGCGQ13326 291 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 GPR158Q5T848 1215 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 DDX53Q86TM3 631 aaKnown RBP6.44□□□□□ -1.38
VPS13B-202ENST00000357162 DAW1Q8N136 415 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 S100A16Q96FQ6 103 aaKnown RBP6.44□□□□□ -1.38
VPS13B-202ENST00000357162 ZNF717Q9BY31 904 aaPredicted RBP6.44□□□□□ -1.38
VPS13B-202ENST00000357162 ARHGEF4Q9NR80 690 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 DOCK6Q96HP0 2047 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 MEIS2O14770 477 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 MATN4O95460 622 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 RPS17P08708 135 aaKnown RBP6.44□□□□□ -1.38
VPS13B-202ENST00000357162 HNRNPLP14866 589 aaKnown RBP eCLIP6.44□□□□□ -1.387e-9■■□□□ 14.2
VPS13B-202ENST00000357162 VARSP26640 1264 aaKnown RBP6.44□□□□□ -1.38
VPS13B-202ENST00000357162 ZIK1Q3SY52 487 aaPredicted RBP6.44□□□□□ -1.38
VPS13B-202ENST00000357162 ZBTB2Q8N680 514 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 NECAB3Q96P71 396 aaPredicted RBP6.44□□□□□ -1.38
VPS13B-202ENST00000357162 TWNKQ96RR1 684 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 HSD3B7Q9H2F3 369 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 FARSAQ9Y285 508 aaKnown RBP6.44□□□□□ -1.38
VPS13B-202ENST00000357162 HSPB11Q9Y547 144 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 TMEM14AQ9Y6G1 99 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 WASF2Q9Y6W5 498 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 TNS2Q63HR2 1409 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 NAV1Q8NEY1 1877 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 UBXN7O94888 489 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 SAGP10523 405 aaPredicted RBP6.44□□□□□ -1.38
VPS13B-202ENST00000357162 FAM199XQ6PEV8 388 aaPredicted RBP6.44□□□□□ -1.38
VPS13B-202ENST00000357162 POMGNT2Q8NAT1 580 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 SLC39A3Q9BRY0 314 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 DERL2Q9GZP9 239 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 C2orf71A6NGG8 1288 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 TREHO43280 583 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 APBA3O96018 575 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 NDUFS1P28331 727 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 MAGEA6P43360 314 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 TAF1AQ15573 450 aaPredicted RBP6.44□□□□□ -1.38
VPS13B-202ENST00000357162 SCUBE3Q8IX30 993 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 EID2Q8N6I1 236 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 SNX33Q8WV41 574 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 CCDC115Q96NT0 180 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 ACO2Q99798 780 aaKnown RBP6.44□□□□□ -1.38
VPS13B-202ENST00000357162 DMAC2Q9NW81 257 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 ABCA2Q9BZC7 2435 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 GPR179Q6PRD1 2367 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 TUBAL3A6NHL2 446 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 C2CD4BA6NLJ0 364 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 OXSR1O95747 527 aaPredicted RBP6.44□□□□□ -1.38
VPS13B-202ENST00000357162 DNTTP04053 509 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 SPARCP09486 303 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 BMP1P13497 986 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 SHMT1P34896 483 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 PDZD9Q8IXQ8 264 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 C4orf32Q8N8J7 132 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 KAZALD1Q96I82 304 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 EPYCQ99645 322 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 TDRD3Q9H7E2 651 aaKnown RBP6.44□□□□□ -1.38
VPS13B-202ENST00000357162 MEPEQ9NQ76 525 aaPredicted RBP6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms