RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 FBXL8Q96CD0 374 aa14.55□□□□□ -0.08
CHD4-201ENST00000357008 FZD8Q9H461 694 aa14.55□□□□□ -0.08
CHD4-201ENST00000357008 FARSBQ9NSD9 589 aaKnown RBP14.55□□□□□ -0.08
CHD4-201ENST00000357008 CLDN4O14493 209 aa14.55□□□□□ -0.08
CHD4-201ENST00000357008 MATN4O95460 622 aa14.55□□□□□ -0.08
CHD4-201ENST00000357008 CXCL14O95715 111 aa14.55□□□□□ -0.08
CHD4-201ENST00000357008 SLC10A7Q0GE19 358 aa14.55□□□□□ -0.08
CHD4-201ENST00000357008 SFT2D3Q587I9 215 aa14.55□□□□□ -0.08
CHD4-201ENST00000357008 PHTF2Q8N3S3 785 aa14.55□□□□□ -0.08
CHD4-201ENST00000357008 MTERF1Q99551 399 aaKnown RBP14.55□□□□□ -0.08
CHD4-201ENST00000357008 PLIN4Q96Q06 1357 aa14.55□□□□□ -0.08
CHD4-201ENST00000357008 PCDH7O60245 1069 aa14.55□□□□□ -0.08
CHD4-201ENST00000357008 SIX3O95343 332 aaPredicted RBP14.55□□□□□ -0.08
CHD4-201ENST00000357008 RYKP34925 604 aa14.55□□□□□ -0.08
CHD4-201ENST00000357008 SLC22A16Q86VW1 577 aa14.55□□□□□ -0.08
CHD4-201ENST00000357008 SLC39A3Q9BRY0 314 aa14.55□□□□□ -0.08
CHD4-201ENST00000357008 SLC6A15Q9H2J7 730 aa14.55□□□□□ -0.08
CHD4-201ENST00000357008 PREBQ9HCU5 417 aa14.55□□□□□ -0.08
CHD4-201ENST00000357008 MKLN1Q9UL63 735 aa14.55□□□□□ -0.08
CHD4-201ENST00000357008 RIMKLBQ9ULI2 386 aa14.55□□□□□ -0.08
CHD4-201ENST00000357008 MROH2AA6NES4 1674 aa14.55□□□□□ -0.08
CHD4-201ENST00000357008 TMEM131LA2VDJ0 1609 aa14.55□□□□□ -0.08
CHD4-201ENST00000357008 TREHO43280 583 aa14.55□□□□□ -0.08
CHD4-201ENST00000357008 CD72P21854 359 aa14.55□□□□□ -0.08
CHD4-201ENST00000357008 GANABQ14697 944 aaKnown RBP14.55□□□□□ -0.08
CHD4-201ENST00000357008 MSANTD2Q6P1R3 559 aa14.55□□□□□ -0.08
CHD4-201ENST00000357008 GALNTL5Q7Z4T8 443 aa14.55□□□□□ -0.08
CHD4-201ENST00000357008 GPR135Q8IZ08 494 aa14.55□□□□□ -0.08
CHD4-201ENST00000357008 CLEC4DQ8WXI8 215 aa14.55□□□□□ -0.08
CHD4-201ENST00000357008 KLHL6Q8WZ60 621 aa14.55□□□□□ -0.08
CHD4-201ENST00000357008 DPF3Q92784 378 aa14.55□□□□□ -0.08
CHD4-201ENST00000357008 KCNC2Q96PR1 638 aa14.55□□□□□ -0.08
CHD4-201ENST00000357008 KLRG2A4D1S0 409 aaPredicted RBP14.54□□□□□ -0.08
CHD4-201ENST00000357008 TLR4O00206 839 aa14.54□□□□□ -0.08
CHD4-201ENST00000357008 ECI2O75521 394 aa14.54□□□□□ -0.08
CHD4-201ENST00000357008 AKT2P31751 481 aa14.54□□□□□ -0.08
CHD4-201ENST00000357008 HCAR3P49019 387 aa14.54□□□□□ -0.08
CHD4-201ENST00000357008 TNFAIP8L2Q6P589 184 aaPredicted RBP14.54□□□□□ -0.08
CHD4-201ENST00000357008 TMEM220Q6QAJ8 160 aa14.54□□□□□ -0.08
CHD4-201ENST00000357008 ZNF517Q6ZMY9 492 aaPredicted RBP14.54□□□□□ -0.08
CHD4-201ENST00000357008 ZC3HC1Q86WB0 502 aaKnown RBP14.54□□□□□ -0.08
CHD4-201ENST00000357008 ZNF395Q9H8N7 513 aaPredicted RBP14.54□□□□□ -0.08
CHD4-201ENST00000357008 H0YGN5 161 aa14.54□□□□□ -0.08
CHD4-201ENST00000357008 GATBO75879 557 aaKnown RBP14.54□□□□□ -0.08
CHD4-201ENST00000357008 INMTO95050 263 aa14.54□□□□□ -0.08
CHD4-201ENST00000357008 SRPRAP08240 638 aaKnown RBP14.54□□□□□ -0.08
CHD4-201ENST00000357008 GNALP38405 381 aa14.54□□□□□ -0.08
CHD4-201ENST00000357008 PIK3CBP42338 1070 aa14.54□□□□□ -0.08
CHD4-201ENST00000357008 GRK6P43250 576 aa14.54□□□□□ -0.08
CHD4-201ENST00000357008 TMEM199Q8N511 208 aa14.54□□□□□ -0.08
CHD4-201ENST00000357008 ZNF516Q92618 1163 aa14.54□□□□□ -0.08
CHD4-201ENST00000357008 NFS1Q9Y697 457 aa14.54□□□□□ -0.08
CHD4-201ENST00000357008 A0A075B6Q4 140 aa14.54□□□□□ -0.08
CHD4-201ENST00000357008 VIPP01282 170 aa14.54□□□□□ -0.08
CHD4-201ENST00000357008 ACADVLP49748 655 aa14.54□□□□□ -0.08
CHD4-201ENST00000357008 CRY2Q49AN0 593 aa14.54□□□□□ -0.08
CHD4-201ENST00000357008 CEP76Q8TAP6 659 aa14.54□□□□□ -0.08
CHD4-201ENST00000357008 AURKBQ96GD4 344 aaPredicted RBP14.54□□□□□ -0.08
CHD4-201ENST00000357008 EXO5Q9H790 373 aa14.54□□□□□ -0.08
CHD4-201ENST00000357008 AKAP8O43823 692 aaKnown RBP14.54□□□□□ -0.08
CHD4-201ENST00000357008 ALPPP05187 535 aa14.54□□□□□ -0.08
CHD4-201ENST00000357008 GPR33Q49SQ1 333 aa14.54□□□□□ -0.08
CHD4-201ENST00000357008 ZNF773Q6PK81 442 aa14.54□□□□□ -0.08
CHD4-201ENST00000357008 GEMIN6Q8WXD5 167 aaKnown RBP14.54□□□□□ -0.08
CHD4-201ENST00000357008 ING5Q8WYH8 240 aa14.54□□□□□ -0.08
CHD4-201ENST00000357008 CDK15Q96Q40 435 aa14.54□□□□□ -0.08
CHD4-201ENST00000357008 RRAGCQ9HB90 399 aa14.54□□□□□ -0.08
CHD4-201ENST00000357008 VPS29Q9UBQ0 182 aa14.54□□□□□ -0.08
CHD4-201ENST00000357008 PHF24Q9UPV7 400 aa14.54□□□□□ -0.08
CHD4-201ENST00000357008 NR2E3Q9Y5X4 410 aa14.54□□□□□ -0.08
CHD4-201ENST00000357008 IGKV6D-41A0A0C4DH26 115 aa14.54□□□□□ -0.08
CHD4-201ENST00000357008 ENGP17813 658 aa14.54□□□□□ -0.08
CHD4-201ENST00000357008 TM4SF1P30408 202 aa14.54□□□□□ -0.08
CHD4-201ENST00000357008 ANKRD23Q86SG2 305 aa14.54□□□□□ -0.08
CHD4-201ENST00000357008 GALNT13Q8IUC8 556 aa14.54□□□□□ -0.08
CHD4-201ENST00000357008 OR13C4Q8NGS5 318 aa14.54□□□□□ -0.08
CHD4-201ENST00000357008 ZNF420Q8TAQ5 688 aaPredicted RBP14.54□□□□□ -0.08
CHD4-201ENST00000357008 HEPHQ9BQS7 1158 aa14.54□□□□□ -0.08
CHD4-201ENST00000357008 PLEKHA1Q9HB21 404 aa14.54□□□□□ -0.08
CHD4-201ENST00000357008 MARK1Q9P0L2 795 aa14.54□□□□□ -0.08
CHD4-201ENST00000357008 SPATA7Q9P0W8 599 aa14.54□□□□□ -0.08
CHD4-201ENST00000357008 FZD4Q9ULV1 537 aa14.54□□□□□ -0.08
CHD4-201ENST00000357008 PTPRJQ12913 1337 aa14.54□□□□□ -0.08
CHD4-201ENST00000357008 M0QX08 132 aa14.53□□□□□ -0.08
CHD4-201ENST00000357008 GSTM3P21266 225 aa14.53□□□□□ -0.08
CHD4-201ENST00000357008 GBX2P52951 348 aaPredicted RBP14.53□□□□□ -0.08
CHD4-201ENST00000357008 HMGCS1Q01581 520 aa14.53□□□□□ -0.08
CHD4-201ENST00000357008 CAND1Q86VP6 1230 aaKnown RBP14.53□□□□□ -0.08
CHD4-201ENST00000357008 NATD1Q8N6N6 113 aa14.53□□□□□ -0.08
CHD4-201ENST00000357008 ZNF615Q8N8J6 731 aa14.53□□□□□ -0.08
CHD4-201ENST00000357008 ZNF641Q96N77 438 aaPredicted RBP14.53□□□□□ -0.08
CHD4-201ENST00000357008 GPR22Q99680 433 aa14.53□□□□□ -0.08
CHD4-201ENST00000357008 ELAC1Q9H777 363 aaKnown RBP14.53□□□□□ -0.08
CHD4-201ENST00000357008 A0A1W2PP18 115 aa14.53□□□□□ -0.08
CHD4-201ENST00000357008 TMEM233B4DJY2 109 aa14.53□□□□□ -0.08
CHD4-201ENST00000357008 ABCB7O75027 752 aa14.53□□□□□ -0.08
CHD4-201ENST00000357008 ZNF404Q494X3 552 aa14.53□□□□□ -0.08
CHD4-201ENST00000357008 MBLAC2Q68D91 279 aa14.53□□□□□ -0.08
CHD4-201ENST00000357008 TXNRD3NBQ6F5E7 133 aa14.53□□□□□ -0.08
CHD4-201ENST00000357008 MIPEPQ99797 713 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms