RNA–Protein interactions for RNA: ENST00000356005.8

FN1-204, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-204ENST00000356005 OGDHLQ9ULD0 1010 aa11.04□□□□□ -0.64
FN1-204ENST00000356005 GPR34Q9UPC5 381 aa11.04□□□□□ -0.64
FN1-204ENST00000356005 DOCK1Q14185 1865 aa11.04□□□□□ -0.64
FN1-204ENST00000356005 NPHS1O60500 1241 aa11.04□□□□□ -0.64
FN1-204ENST00000356005 POP7O75817 140 aaKnown RBP11.04□□□□□ -0.64
FN1-204ENST00000356005 TBX18O95935 607 aa11.04□□□□□ -0.64
FN1-204ENST00000356005 HIPK1Q86Z02 1210 aa11.04□□□□□ -0.64
FN1-204ENST00000356005 SPATA6LQ8N4H0 392 aa11.04□□□□□ -0.64
FN1-204ENST00000356005 TFGQ92734 400 aaPredicted RBP11.04□□□□□ -0.64
FN1-204ENST00000356005 SDCBP2Q9H190 292 aa11.04□□□□□ -0.64
FN1-204ENST00000356005 ADAM7Q9H2U9 754 aa11.04□□□□□ -0.64
FN1-204ENST00000356005 Q9N2J8 555 aa11.04□□□□□ -0.64
FN1-204ENST00000356005 C1orf109Q9NX04 203 aa11.04□□□□□ -0.64
FN1-204ENST00000356005 IFT80Q9P2H3 777 aaPredicted RBP11.04□□□□□ -0.64
FN1-204ENST00000356005 RAB21Q9UL25 225 aa11.04□□□□□ -0.64
FN1-204ENST00000356005 LOC100506127A0A0U1RQW1 187 aa11.04□□□□□ -0.64
FN1-204ENST00000356005 IQCF5A8MTL0 148 aa11.04□□□□□ -0.64
FN1-204ENST00000356005 MAGEB17A8MXT2 336 aa11.04□□□□□ -0.64
FN1-204ENST00000356005 EPOP01588 193 aa11.04□□□□□ -0.64
FN1-204ENST00000356005 IFNA6P05013 189 aa11.04□□□□□ -0.64
FN1-204ENST00000356005 CRISP3P54108 245 aa11.04□□□□□ -0.64
FN1-204ENST00000356005 THAP5Q7Z6K1 395 aa11.04□□□□□ -0.64
FN1-204ENST00000356005 PNLDC1Q8NA58 520 aaKnown RBP11.04□□□□□ -0.64
FN1-204ENST00000356005 WDR92Q96MX6 357 aa11.04□□□□□ -0.64
FN1-204ENST00000356005 CAB39LQ9H9S4 337 aa11.04□□□□□ -0.64
FN1-204ENST00000356005 XPNPEP1Q9NQW7 623 aa11.04□□□□□ -0.64
FN1-204ENST00000356005 PRAMEF12O95522 483 aa11.04□□□□□ -0.64
FN1-204ENST00000356005 CFHP08603 1231 aa11.04□□□□□ -0.64
FN1-204ENST00000356005 DNASE1L1P49184 302 aa11.04□□□□□ -0.64
FN1-204ENST00000356005 ZMYND11Q15326 602 aa11.04□□□□□ -0.64
FN1-204ENST00000356005 TREML1Q86YW5 311 aa11.04□□□□□ -0.64
FN1-204ENST00000356005 DCP2Q8IU60 420 aaKnown RBP11.04□□□□□ -0.64
FN1-204ENST00000356005 ADAMTS10Q9H324 1103 aa11.04□□□□□ -0.64
FN1-204ENST00000356005 ACTL8Q9H568 366 aa11.04□□□□□ -0.64
FN1-204ENST00000356005 FAM92AA1XBS5 289 aa11.04□□□□□ -0.64
FN1-204ENST00000356005 ZNF3P17036 446 aa11.04□□□□□ -0.64
FN1-204ENST00000356005 SP140Q13342 867 aa11.04□□□□□ -0.64
FN1-204ENST00000356005 RASGEF1CQ8N431 466 aa11.04□□□□□ -0.64
FN1-204ENST00000356005 OR9A1PQ8NGU1 263 aa11.04□□□□□ -0.64
FN1-204ENST00000356005 SNX33Q8WV41 574 aa11.04□□□□□ -0.64
FN1-204ENST00000356005 GMLQ99445 158 aa11.04□□□□□ -0.64
FN1-204ENST00000356005 PTPN18Q99952 460 aa11.04□□□□□ -0.64
FN1-204ENST00000356005 MVB12BQ9H7P6 319 aa11.04□□□□□ -0.64
FN1-204ENST00000356005 TOR4AQ9NXH8 423 aa11.04□□□□□ -0.64
FN1-204ENST00000356005 TRPM3Q9HCF6 1732 aaPredicted RBP11.04□□□□□ -0.64
FN1-204ENST00000356005 ADSSP30520 456 aa11.03□□□□□ -0.64
FN1-204ENST00000356005 RUNX3Q13761 415 aa11.03□□□□□ -0.64
FN1-204ENST00000356005 LRRC73Q5JTD7 316 aa11.03□□□□□ -0.64
FN1-204ENST00000356005 RSBN1Q5VWQ0 802 aaPredicted RBP11.03□□□□□ -0.64
FN1-204ENST00000356005 KBTBD8Q8NFY9 601 aa11.03□□□□□ -0.64
FN1-204ENST00000356005 NXNL1Q96CM4 212 aa11.03□□□□□ -0.64
FN1-204ENST00000356005 LRRC4CQ9HCJ2 640 aa11.03□□□□□ -0.64
FN1-204ENST00000356005 REM1O75628 298 aa11.03□□□□□ -0.64
FN1-204ENST00000356005 NMBRP28336 390 aa11.03□□□□□ -0.64
FN1-204ENST00000356005 CHN2P52757 468 aa11.03□□□□□ -0.64
FN1-204ENST00000356005 EVX2Q03828 476 aa11.03□□□□□ -0.64
FN1-204ENST00000356005 CYP4F3Q08477 520 aa11.03□□□□□ -0.64
FN1-204ENST00000356005 SNAPC1Q16533 368 aa11.03□□□□□ -0.64
FN1-204ENST00000356005 SLC8B1Q6J4K2 584 aa11.03□□□□□ -0.64
FN1-204ENST00000356005 DRICH1Q6PGQ1 229 aaPredicted RBP11.03□□□□□ -0.64
FN1-204ENST00000356005 FAM3CQ92520 227 aa11.03□□□□□ -0.64
FN1-204ENST00000356005 CYP2S1Q96SQ9 504 aa11.03□□□□□ -0.64
FN1-204ENST00000356005 GPR174Q9BXC1 333 aa11.03□□□□□ -0.64
FN1-204ENST00000356005 KCNH6Q9H252 994 aa11.03□□□□□ -0.64
FN1-204ENST00000356005 LYARQ9NX58 379 aaKnown RBP11.03□□□□□ -0.64
FN1-204ENST00000356005 VPS29Q9UBQ0 182 aa11.03□□□□□ -0.64
FN1-204ENST00000356005 PLK4O00444 970 aa11.03□□□□□ -0.64
FN1-204ENST00000356005 RGS20O76081 388 aa11.03□□□□□ -0.64
FN1-204ENST00000356005 SEMA3DO95025 777 aa11.03□□□□□ -0.64
FN1-204ENST00000356005 ZNF37AP17032 561 aaPredicted RBP11.03□□□□□ -0.64
FN1-204ENST00000356005 MLLT6P55198 1093 aaPredicted RBP11.03□□□□□ -0.64
FN1-204ENST00000356005 IL23RQ5VWK5 629 aa11.03□□□□□ -0.64
FN1-204ENST00000356005 ZNF540Q8NDQ6 660 aa11.03□□□□□ -0.64
FN1-204ENST00000356005 OR4C15Q8NGM1 316 aa11.03□□□□□ -0.64
FN1-204ENST00000356005 KCNJ9Q92806 393 aa11.03□□□□□ -0.64
FN1-204ENST00000356005 RMI1Q9H9A7 625 aa11.03□□□□□ -0.64
FN1-204ENST00000356005 CASP8AP2Q9UKL3 1982 aa11.03□□□□□ -0.64
FN1-204ENST00000356005 PCDH7O60245 1069 aa11.03□□□□□ -0.64
FN1-204ENST00000356005 TACSTD2P09758 323 aa11.03□□□□□ -0.64
FN1-204ENST00000356005 MARCKSL1P49006 195 aa11.03□□□□□ -0.64
FN1-204ENST00000356005 CDH13P55290 713 aa11.03□□□□□ -0.64
FN1-204ENST00000356005 NFKB2Q00653 900 aa11.03□□□□□ -0.64
FN1-204ENST00000356005 BST1Q10588 318 aa11.03□□□□□ -0.64
FN1-204ENST00000356005 SIRPB2Q5JXA9 342 aa11.03□□□□□ -0.64
FN1-204ENST00000356005 FAM174AQ8TBP5 190 aa11.03□□□□□ -0.64
FN1-204ENST00000356005 TMEM234Q8WY98 164 aa11.03□□□□□ -0.64
FN1-204ENST00000356005 PRODH2Q9UF12 536 aa11.03□□□□□ -0.64
FN1-204ENST00000356005 PCDHGB1Q9Y5G3 927 aa11.03□□□□□ -0.64
FN1-204ENST00000356005 UNC13CQ8NB66 2214 aa11.03□□□□□ -0.64
FN1-204ENST00000356005 CCDC162PA2VCL2 907 aa11.03□□□□□ -0.64
FN1-204ENST00000356005 H0YJX3 145 aa11.03□□□□□ -0.64
FN1-204ENST00000356005 BPGMP07738 259 aa11.03□□□□□ -0.64
FN1-204ENST00000356005 EPHA3P29320 983 aa11.03□□□□□ -0.64
FN1-204ENST00000356005 ZSWIM7Q19AV6 140 aa11.03□□□□□ -0.64
FN1-204ENST00000356005 PLEKHS1Q5SXH7 462 aa11.03□□□□□ -0.64
FN1-204ENST00000356005 OR4E2Q8NGC2 313 aa11.03□□□□□ -0.64
FN1-204ENST00000356005 MIEF2Q96C03 454 aa11.03□□□□□ -0.64
FN1-204ENST00000356005 USP54Q70EL1 1684 aa11.03□□□□□ -0.64
FN1-204ENST00000356005 ATP6AP2A0A1C7CYW4 349 aa11.03□□□□□ -0.64
FN1-204ENST00000356005 ATP6AP2O75787 350 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms