RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 KCNC1P48547 511 aa17.3■□□□□ 0.36
PDLIM7-202ENST00000355841 KPNA2P52292 529 aaKnown RBP17.3■□□□□ 0.36
PDLIM7-202ENST00000355841 PRKAA1Q13131 559 aa17.3■□□□□ 0.36
PDLIM7-202ENST00000355841 PPP1R3AQ16821 1122 aa17.3■□□□□ 0.36
PDLIM7-202ENST00000355841 SUSD1Q6UWL2 747 aa17.3■□□□□ 0.36
PDLIM7-202ENST00000355841 TRIM73Q86UV7 250 aa17.3■□□□□ 0.36
PDLIM7-202ENST00000355841 TMPRSS12Q86WS5 348 aa17.3■□□□□ 0.36
PDLIM7-202ENST00000355841 TDRPQ86YL5 185 aa17.3■□□□□ 0.36
PDLIM7-202ENST00000355841 DCBLD1Q8N8Z6 715 aa17.3■□□□□ 0.36
PDLIM7-202ENST00000355841 FBXO15Q8NCQ5 510 aaPredicted RBP17.3■□□□□ 0.36
PDLIM7-202ENST00000355841 OR2L8Q8NGY9 312 aa17.3■□□□□ 0.36
PDLIM7-202ENST00000355841 ZNF480Q8WV37 535 aa17.3■□□□□ 0.36
PDLIM7-202ENST00000355841 MTBPQ96DY7 904 aa17.3■□□□□ 0.36
PDLIM7-202ENST00000355841 DEPDC7Q96QD5 511 aa17.3■□□□□ 0.36
PDLIM7-202ENST00000355841 ALG9Q9H6U8 611 aa17.3■□□□□ 0.36
PDLIM7-202ENST00000355841 PCMTD2Q9NV79 361 aa17.3■□□□□ 0.36
PDLIM7-202ENST00000355841 ARL15Q9NXU5 204 aa17.3■□□□□ 0.36
PDLIM7-202ENST00000355841 ACTR10Q9NZ32 417 aa17.3■□□□□ 0.36
PDLIM7-202ENST00000355841 LNPEPQ9UIQ6 1025 aa17.3■□□□□ 0.36
PDLIM7-202ENST00000355841 ENTPD2Q9Y5L3 495 aa17.3■□□□□ 0.36
PDLIM7-202ENST00000355841 PIPSLA2A3N6 862 aa17.29■□□□□ 0.36
PDLIM7-202ENST00000355841 FAM221BA6H8Z2 402 aa17.29■□□□□ 0.36
PDLIM7-202ENST00000355841 NCF1BA6NI72 391 aaPredicted RBP17.29■□□□□ 0.36
PDLIM7-202ENST00000355841 NCF1CA8MVU1 366 aaPredicted RBP17.29■□□□□ 0.36
PDLIM7-202ENST00000355841 ISM1B1AKI9 464 aa17.29■□□□□ 0.36
PDLIM7-202ENST00000355841 CDH16O75309 829 aa17.29■□□□□ 0.36
PDLIM7-202ENST00000355841 HIST1H2AGP0C0S8 130 aaPredicted RBP17.29■□□□□ 0.36
PDLIM7-202ENST00000355841 THRAP10827 490 aa17.29■□□□□ 0.36
PDLIM7-202ENST00000355841 NCF1P14598 390 aaPredicted RBP17.29■□□□□ 0.36
PDLIM7-202ENST00000355841 HIST1H2ADP20671 130 aa17.29■□□□□ 0.36
PDLIM7-202ENST00000355841 PSMB5P28074 263 aa17.29■□□□□ 0.36
PDLIM7-202ENST00000355841 INHBCP55103 352 aa17.29■□□□□ 0.36
PDLIM7-202ENST00000355841 ZFP36L1Q07352 338 aaKnown RBP17.29■□□□□ 0.36
PDLIM7-202ENST00000355841 ANKS6Q68DC2 871 aa17.29■□□□□ 0.36
PDLIM7-202ENST00000355841 TMPRSS7Q7RTY8 843 aa17.29■□□□□ 0.36
PDLIM7-202ENST00000355841 SYTL1Q8IYJ3 562 aa17.29■□□□□ 0.36
PDLIM7-202ENST00000355841 ANKRD7Q92527 254 aa17.29■□□□□ 0.36
PDLIM7-202ENST00000355841 EXT2Q93063 718 aa17.29■□□□□ 0.36
PDLIM7-202ENST00000355841 ZDHHC12Q96GR4 267 aa17.29■□□□□ 0.36
PDLIM7-202ENST00000355841 HIST1H2AHQ96KK5 128 aa17.29■□□□□ 0.36
PDLIM7-202ENST00000355841 MAP3K3Q99759 626 aa17.29■□□□□ 0.36
PDLIM7-202ENST00000355841 HIST1H2AJQ99878 128 aa17.29■□□□□ 0.36
PDLIM7-202ENST00000355841 H2AFJQ9BTM1 129 aa17.29■□□□□ 0.36
PDLIM7-202ENST00000355841 KLHL25Q9H0H3 589 aa17.29■□□□□ 0.36
PDLIM7-202ENST00000355841 ATG10Q9H0Y0 220 aa17.29■□□□□ 0.36
PDLIM7-202ENST00000355841 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.29■□□□□ 0.36
PDLIM7-202ENST00000355841 KLK13Q9UKR3 277 aa17.29■□□□□ 0.36
PDLIM7-202ENST00000355841 MN1Q10571 1320 aaPredicted RBP17.29■□□□□ 0.36
PDLIM7-202ENST00000355841 PMS2P1A4D2B8 440 aa17.29■□□□□ 0.36
PDLIM7-202ENST00000355841 C9P02748 559 aa17.29■□□□□ 0.36
PDLIM7-202ENST00000355841 MPOP05164 745 aa17.29■□□□□ 0.36
PDLIM7-202ENST00000355841 UGT2B7P16662 529 aa17.29■□□□□ 0.36
PDLIM7-202ENST00000355841 KRT15P19012 456 aa17.29■□□□□ 0.36
PDLIM7-202ENST00000355841 IMPA1P29218 277 aa17.29■□□□□ 0.36
PDLIM7-202ENST00000355841 PRDX3P30048 256 aaKnown RBP17.29■□□□□ 0.36
PDLIM7-202ENST00000355841 LSSP48449 732 aa17.29■□□□□ 0.36
PDLIM7-202ENST00000355841 SEPHS1P49903 392 aa17.29■□□□□ 0.36
PDLIM7-202ENST00000355841 PNLIPRP1P54315 467 aa17.29■□□□□ 0.36
PDLIM7-202ENST00000355841 ATP6V0D1P61421 351 aa17.29■□□□□ 0.36
PDLIM7-202ENST00000355841 ZNF844Q08AG5 666 aa17.29■□□□□ 0.36
PDLIM7-202ENST00000355841 CYP2A13Q16696 494 aa17.29■□□□□ 0.36
PDLIM7-202ENST00000355841 ZXDCQ2QGD7 858 aaPredicted RBP17.29■□□□□ 0.36
PDLIM7-202ENST00000355841 TIFABQ6ZNK6 161 aa17.29■□□□□ 0.36
PDLIM7-202ENST00000355841 FRA10AC1Q70Z53 315 aa17.29■□□□□ 0.36
PDLIM7-202ENST00000355841 ADAMTSL2Q86TH1 951 aa17.29■□□□□ 0.36
PDLIM7-202ENST00000355841 ISCA2Q86U28 154 aa17.29■□□□□ 0.36
PDLIM7-202ENST00000355841 GALNT15Q8N3T1 639 aa17.29■□□□□ 0.36
PDLIM7-202ENST00000355841 RAB42Q8N4Z0 105 aa17.29■□□□□ 0.36
PDLIM7-202ENST00000355841 KIAA1191Q96A73 305 aa17.29■□□□□ 0.36
PDLIM7-202ENST00000355841 CCDC138Q96M89 665 aa17.29■□□□□ 0.36
PDLIM7-202ENST00000355841 GPR78Q96P69 363 aa17.29■□□□□ 0.36
PDLIM7-202ENST00000355841 ZIM3Q96PE6 472 aa17.29■□□□□ 0.36
PDLIM7-202ENST00000355841 OR2A14Q96R47 310 aa17.29■□□□□ 0.36
PDLIM7-202ENST00000355841 ACAT2Q9BWD1 397 aa17.29■□□□□ 0.36
PDLIM7-202ENST00000355841 PPCSQ9HAB8 311 aa17.29■□□□□ 0.36
PDLIM7-202ENST00000355841 NMRAL1Q9HBL8 299 aa17.29■□□□□ 0.36
PDLIM7-202ENST00000355841 SPATA7Q9P0W8 599 aa17.29■□□□□ 0.36
PDLIM7-202ENST00000355841 STOX2Q9P2F5 926 aaPredicted RBP17.29■□□□□ 0.36
PDLIM7-202ENST00000355841 EPHA6Q9UF33 1036 aa17.29■□□□□ 0.36
PDLIM7-202ENST00000355841 POMT2Q9UKY4 750 aa17.29■□□□□ 0.36
PDLIM7-202ENST00000355841 ASPMQ8IZT6 3477 aa17.28■□□□□ 0.36
PDLIM7-202ENST00000355841 IGHV5-51A0A0C4DH38 117 aa17.28■□□□□ 0.36
PDLIM7-202ENST00000355841 C2orf74A8MZ97 194 aa17.28■□□□□ 0.36
PDLIM7-202ENST00000355841 KLHL2O95198 593 aa17.28■□□□□ 0.36
PDLIM7-202ENST00000355841 MT-ND3P03897 115 aa17.28■□□□□ 0.36
PDLIM7-202ENST00000355841 PYGBP11216 843 aa17.28■□□□□ 0.36
PDLIM7-202ENST00000355841 ERGP11308 486 aa17.28■□□□□ 0.36
PDLIM7-202ENST00000355841 PVRP15151 417 aa17.28■□□□□ 0.36
PDLIM7-202ENST00000355841 SLC26A3P40879 764 aa17.28■□□□□ 0.36
PDLIM7-202ENST00000355841 YBX1P67809 324 aaKnown RBP17.28■□□□□ 0.36
PDLIM7-202ENST00000355841 C16orf72Q14CZ0 275 aa17.28■□□□□ 0.36
PDLIM7-202ENST00000355841 FAM83EQ2M2I3 478 aa17.28■□□□□ 0.36
PDLIM7-202ENST00000355841 C18orf21Q32NC0 220 aaPredicted RBP17.28■□□□□ 0.36
PDLIM7-202ENST00000355841 CACHD1Q5VU97 1274 aa17.28■□□□□ 0.36
PDLIM7-202ENST00000355841 IQCKQ8N0W5 287 aa17.28■□□□□ 0.36
PDLIM7-202ENST00000355841 FLVCR1-AS1Q8TAF5 88 aa17.28■□□□□ 0.36
PDLIM7-202ENST00000355841 HNRNPLLQ8WVV9 542 aaKnown RBP17.28■□□□□ 0.36
PDLIM7-202ENST00000355841 ALKBH8Q96BT7 664 aaKnown RBP17.28■□□□□ 0.36
PDLIM7-202ENST00000355841 TMEM74Q96NL1 305 aa17.28■□□□□ 0.36
PDLIM7-202ENST00000355841 SCNM1Q9BWG6 230 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms