RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 TRIM74Q86UV6 250 aa16.73■□□□□ 0.27
VPS13B-201ENST00000355155 TRAPPC5Q8IUR0 188 aa16.73■□□□□ 0.27
VPS13B-201ENST00000355155 CFAP206Q8IYR0 622 aa16.73■□□□□ 0.27
VPS13B-201ENST00000355155 FAM9CQ8IZT9 166 aa16.73■□□□□ 0.27
VPS13B-201ENST00000355155 GLB1L3Q8NCI6 653 aaPredicted RBP16.73■□□□□ 0.27
VPS13B-201ENST00000355155 PROKR1Q8TCW9 393 aa16.73■□□□□ 0.27
VPS13B-201ENST00000355155 CMTM7Q96FZ5 175 aa16.73■□□□□ 0.27
VPS13B-201ENST00000355155 DUS3LQ96G46 650 aaKnown RBP16.73■□□□□ 0.27
VPS13B-201ENST00000355155 BRF2Q9HAW0 419 aa16.73■□□□□ 0.27
VPS13B-201ENST00000355155 PHPT1Q9NRX4 125 aaPredicted RBP16.73■□□□□ 0.27
VPS13B-201ENST00000355155 NKX1-2Q9UD57 310 aaPredicted RBP16.73■□□□□ 0.27
VPS13B-201ENST00000355155 GIMAP2Q9UG22 337 aa16.73■□□□□ 0.27
VPS13B-201ENST00000355155 PCYT1BQ9Y5K3 369 aaPredicted RBP16.73■□□□□ 0.27
VPS13B-201ENST00000355155 TRIM38O00635 465 aa16.73■□□□□ 0.27
VPS13B-201ENST00000355155 TOR1BO14657 336 aa16.73■□□□□ 0.27
VPS13B-201ENST00000355155 MRASO14807 208 aa16.73■□□□□ 0.27
VPS13B-201ENST00000355155 RNGTTO60942 597 aaKnown RBP16.73■□□□□ 0.27
VPS13B-201ENST00000355155 GNPDA1P46926 289 aa16.73■□□□□ 0.27
VPS13B-201ENST00000355155 CLCNKAP51800 687 aa16.73■□□□□ 0.27
VPS13B-201ENST00000355155 CCNIQ14094 377 aa16.73■□□□□ 0.27
VPS13B-201ENST00000355155 KIF19Q2TAC6 998 aa16.73■□□□□ 0.27
VPS13B-201ENST00000355155 WLSQ5T9L3 541 aa16.73■□□□□ 0.27
VPS13B-201ENST00000355155 RETREG3Q86VR2 466 aa16.73■□□□□ 0.27
VPS13B-201ENST00000355155 AMZ2Q86W34 360 aa16.73■□□□□ 0.27
VPS13B-201ENST00000355155 ZNF687Q8N1G0 1237 aa16.73■□□□□ 0.27
VPS13B-201ENST00000355155 SLC17A9Q9BYT1 436 aa16.73■□□□□ 0.27
VPS13B-201ENST00000355155 SPATA7Q9P0W8 599 aa16.73■□□□□ 0.27
VPS13B-201ENST00000355155 ACSL5Q9ULC5 683 aa16.73■□□□□ 0.27
VPS13B-201ENST00000355155 ZNF490Q9ULM2 529 aaPredicted RBP16.73■□□□□ 0.27
VPS13B-201ENST00000355155 SLC22A14Q9Y267 594 aa16.73■□□□□ 0.27
VPS13B-201ENST00000355155 RNASEH2AO75792 299 aaKnown RBP16.72■□□□□ 0.27
VPS13B-201ENST00000355155 PCCBP05166 539 aa16.72■□□□□ 0.27
VPS13B-201ENST00000355155 AP5B1Q2VPB7 878 aa16.72■□□□□ 0.27
VPS13B-201ENST00000355155 CMPK2Q5EBM0 449 aa16.72■□□□□ 0.27
VPS13B-201ENST00000355155 FAM83HQ6ZRV2 1179 aaPredicted RBP16.72■□□□□ 0.27
VPS13B-201ENST00000355155 SNX31Q8N9S9 440 aa16.72■□□□□ 0.27
VPS13B-201ENST00000355155 OR9I1Q8NGQ6 314 aa16.72■□□□□ 0.27
VPS13B-201ENST00000355155 OR4K3Q96R72 315 aa16.72■□□□□ 0.27
VPS13B-201ENST00000355155 WDR26Q9H7D7 661 aa16.72■□□□□ 0.27
VPS13B-201ENST00000355155 ACTR8Q9H981 624 aa16.72■□□□□ 0.27
VPS13B-201ENST00000355155 INTS7Q9NVH2 962 aaKnown RBP16.72■□□□□ 0.27
VPS13B-201ENST00000355155 SPATA6Q9NWH7 488 aaPredicted RBP16.72■□□□□ 0.27
VPS13B-201ENST00000355155 CROTQ9UKG9 612 aa16.72■□□□□ 0.27
VPS13B-201ENST00000355155 MMP17Q9ULZ9 603 aa16.72■□□□□ 0.27
VPS13B-201ENST00000355155 ASPDHA6ND91 283 aa16.72■□□□□ 0.27
VPS13B-201ENST00000355155 ACOT8O14734 319 aa16.72■□□□□ 0.27
VPS13B-201ENST00000355155 CEACAM7Q14002 265 aa16.72■□□□□ 0.27
VPS13B-201ENST00000355155 RGL4Q8IZJ4 473 aa16.72■□□□□ 0.27
VPS13B-201ENST00000355155 C11orf24Q96F05 449 aaPredicted RBP16.72■□□□□ 0.27
VPS13B-201ENST00000355155 UHRF1Q96T88 793 aaPredicted RBP16.72■□□□□ 0.27
VPS13B-201ENST00000355155 LGR4Q9BXB1 951 aa16.72■□□□□ 0.27
VPS13B-201ENST00000355155 ACPTQ9BZG2 426 aa16.72■□□□□ 0.27
VPS13B-201ENST00000355155 C1orf109Q9NX04 203 aa16.72■□□□□ 0.27
VPS13B-201ENST00000355155 BCAP29Q9UHQ4 241 aa16.72■□□□□ 0.27
VPS13B-201ENST00000355155 FXYD1O00168 92 aa16.71■□□□□ 0.27
VPS13B-201ENST00000355155 PCDH8O95206 1070 aa16.71■□□□□ 0.27
VPS13B-201ENST00000355155 IL12AP29459 219 aa16.71■□□□□ 0.27
VPS13B-201ENST00000355155 IGFALSP35858 605 aa16.71■□□□□ 0.27
VPS13B-201ENST00000355155 BDKRB1P46663 353 aa16.71■□□□□ 0.27
VPS13B-201ENST00000355155 CYP2A13Q16696 494 aa16.71■□□□□ 0.27
VPS13B-201ENST00000355155 USP39Q53GS9 565 aaKnown RBP16.71■□□□□ 0.27
VPS13B-201ENST00000355155 CYP20A1Q6UW02 462 aa16.71■□□□□ 0.27
VPS13B-201ENST00000355155 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.71■□□□□ 0.27
VPS13B-201ENST00000355155 FNDC5Q8NAU1 212 aa16.71■□□□□ 0.27
VPS13B-201ENST00000355155 ZNF480Q8WV37 535 aa16.71■□□□□ 0.27
VPS13B-201ENST00000355155 FOXJ1Q92949 421 aa16.71■□□□□ 0.27
VPS13B-201ENST00000355155 SPDL1Q96EA4 605 aa16.71■□□□□ 0.27
VPS13B-201ENST00000355155 UBE2ZQ9H832 354 aaPredicted RBP16.71■□□□□ 0.27
VPS13B-201ENST00000355155 LRTM1Q9HBL6 345 aa16.71■□□□□ 0.27
VPS13B-201ENST00000355155 GID8Q9NWU2 228 aa16.71■□□□□ 0.27
VPS13B-201ENST00000355155 KLQ9UEF7 1012 aa16.71■□□□□ 0.27
VPS13B-201ENST00000355155 CLGNO14967 610 aa16.71■□□□□ 0.27
VPS13B-201ENST00000355155 BCAS2O75934 225 aaPredicted RBP16.71■□□□□ 0.27
VPS13B-201ENST00000355155 PDYNP01213 254 aa16.71■□□□□ 0.27
VPS13B-201ENST00000355155 PRPS2P11908 318 aa16.71■□□□□ 0.27
VPS13B-201ENST00000355155 ME2P23368 584 aa16.71■□□□□ 0.27
VPS13B-201ENST00000355155 NR6A1Q15406 480 aa16.71■□□□□ 0.27
VPS13B-201ENST00000355155 FXNQ16595 210 aa16.71■□□□□ 0.27
VPS13B-201ENST00000355155 CCSMST1Q4G0I0 132 aa16.71■□□□□ 0.27
VPS13B-201ENST00000355155 RFTN2Q52LD8 501 aaPredicted RBP16.71■□□□□ 0.27
VPS13B-201ENST00000355155 C1orf146Q5VVC0 180 aa16.71■□□□□ 0.27
VPS13B-201ENST00000355155 CDRT15Q96T59 188 aa16.71■□□□□ 0.27
VPS13B-201ENST00000355155 MENTQ9BUN1 341 aa16.71■□□□□ 0.27
VPS13B-201ENST00000355155 SPAG4Q9NPE6 437 aa16.71■□□□□ 0.27
VPS13B-201ENST00000355155 LEF1Q9UJU2 399 aaPredicted RBP16.71■□□□□ 0.27
VPS13B-201ENST00000355155 EIF3LQ9Y262 564 aaKnown RBP16.71■□□□□ 0.27
VPS13B-201ENST00000355155 ANKRD12Q6UB98 2062 aa16.71■□□□□ 0.26
VPS13B-201ENST00000355155 A0A1W2PQU0 124 aa16.7■□□□□ 0.26
VPS13B-201ENST00000355155 CHURC1-FNTBB4DL54 471 aa16.7■□□□□ 0.26
VPS13B-201ENST00000355155 SLC16A8O95907 504 aa16.7■□□□□ 0.26
VPS13B-201ENST00000355155 CD22P20273 847 aa16.7■□□□□ 0.26
VPS13B-201ENST00000355155 KELP23276 732 aa16.7■□□□□ 0.26
VPS13B-201ENST00000355155 POLR2JP52435 117 aaKnown RBP16.7■□□□□ 0.26
VPS13B-201ENST00000355155 INPP5AQ14642 412 aa16.7■□□□□ 0.26
VPS13B-201ENST00000355155 FRG2Q64ET8 278 aa16.7■□□□□ 0.26
VPS13B-201ENST00000355155 ATG9BQ674R7 924 aa16.7■□□□□ 0.26
VPS13B-201ENST00000355155 LCTLQ6UWM7 567 aa16.7■□□□□ 0.26
VPS13B-201ENST00000355155 MSANTD1Q6ZTZ1 278 aa16.7■□□□□ 0.26
VPS13B-201ENST00000355155 LPCAT2Q7L5N7 544 aa16.7■□□□□ 0.26
VPS13B-201ENST00000355155 DCUN1D3Q8IWE4 304 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms