RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 ERI1Q8IV48 349 aaKnown RBP21.7■■□□□ 1.06
NKX2-1-201ENST00000354822 MSRB3Q8IXL7 192 aa21.7■■□□□ 1.06
NKX2-1-201ENST00000354822 TMBIM1Q969X1 311 aa21.7■■□□□ 1.06
NKX2-1-201ENST00000354822 TMIGD2Q96BF3 282 aa21.7■■□□□ 1.06
NKX2-1-201ENST00000354822 SDCCAG3Q96C92 435 aa21.7■■□□□ 1.06
NKX2-1-201ENST00000354822 KAT8Q9H7Z6 458 aaKnown RBP21.7■■□□□ 1.06
NKX2-1-201ENST00000354822 TIMMDC1Q9NPL8 285 aa21.7■■□□□ 1.06
NKX2-1-201ENST00000354822 RAD18Q9NS91 495 aa21.7■■□□□ 1.06
NKX2-1-201ENST00000354822 LIMD1Q9UGP4 676 aa21.7■■□□□ 1.06
NKX2-1-201ENST00000354822 NRG2O14511 850 aaPredicted RBP21.7■■□□□ 1.06
NKX2-1-201ENST00000354822 RETP07949 1114 aa21.7■■□□□ 1.06
NKX2-1-201ENST00000354822 SLC5A2P31639 672 aa21.7■■□□□ 1.06
NKX2-1-201ENST00000354822 TTKP33981 857 aa21.7■■□□□ 1.06
NKX2-1-201ENST00000354822 MTHFRP42898 656 aa21.7■■□□□ 1.06
NKX2-1-201ENST00000354822 HNRNPFP52597 415 aaKnown RBP21.7■■□□□ 1.06
NKX2-1-201ENST00000354822 DCDC1P59894 354 aa21.7■■□□□ 1.06
NKX2-1-201ENST00000354822 KCNC3Q14003 757 aa21.7■■□□□ 1.06
NKX2-1-201ENST00000354822 C11orf91Q3C1V1 193 aa21.7■■□□□ 1.06
NKX2-1-201ENST00000354822 PTCHD3Q3KNS1 767 aa21.7■■□□□ 1.06
NKX2-1-201ENST00000354822 TBPL2Q6SJ96 375 aa21.7■■□□□ 1.06
NKX2-1-201ENST00000354822 OTOP2Q7RTS6 562 aa21.7■■□□□ 1.06
NKX2-1-201ENST00000354822 ZDHHC13Q8IUH4 622 aa21.7■■□□□ 1.06
NKX2-1-201ENST00000354822 MICU2Q8IYU8 434 aa21.7■■□□□ 1.06
NKX2-1-201ENST00000354822 TMEM132CQ8N3T6 1108 aa21.7■■□□□ 1.06
NKX2-1-201ENST00000354822 IRF7Q92985 503 aa21.7■■□□□ 1.06
NKX2-1-201ENST00000354822 TESCQ96BS2 214 aa21.7■■□□□ 1.06
NKX2-1-201ENST00000354822 TIFAQ96CG3 184 aa21.7■■□□□ 1.06
NKX2-1-201ENST00000354822 BBS2Q9BXC9 721 aa21.7■■□□□ 1.06
NKX2-1-201ENST00000354822 FAM83DQ9H4H8 585 aa21.7■■□□□ 1.06
NKX2-1-201ENST00000354822 DNAJC11Q9NVH1 559 aa21.7■■□□□ 1.06
NKX2-1-201ENST00000354822 NEDD8-MDP1E9PL57 170 aa21.69■■□□□ 1.06
NKX2-1-201ENST00000354822 ZNF701M0R085 212 aaPredicted RBP21.69■■□□□ 1.06
NKX2-1-201ENST00000354822 CXCR6O00574 342 aa21.69■■□□□ 1.06
NKX2-1-201ENST00000354822 IL1RNP18510 177 aa21.69■■□□□ 1.06
NKX2-1-201ENST00000354822 TMEM214Q6NUQ4 689 aaKnown RBP21.69■■□□□ 1.06
NKX2-1-201ENST00000354822 ELMSAN1Q6PJG2 1045 aa21.69■■□□□ 1.06
NKX2-1-201ENST00000354822 MSANTD1Q6ZTZ1 278 aa21.69■■□□□ 1.06
NKX2-1-201ENST00000354822 Q6ZVU0 165 aa21.69■■□□□ 1.06
NKX2-1-201ENST00000354822 DET1Q7L5Y6 550 aa21.69■■□□□ 1.06
NKX2-1-201ENST00000354822 BEND7Q8N7W2 519 aaPredicted RBP21.69■■□□□ 1.06
NKX2-1-201ENST00000354822 CHST14Q8NCH0 376 aa21.69■■□□□ 1.06
NKX2-1-201ENST00000354822 OR2A12Q8NGT7 310 aa21.69■■□□□ 1.06
NKX2-1-201ENST00000354822 PNPT1Q8TCS8 783 aaKnown RBP21.69■■□□□ 1.06
NKX2-1-201ENST00000354822 ASZ1Q8WWH4 475 aa21.69■■□□□ 1.06
NKX2-1-201ENST00000354822 FAM162AQ96A26 154 aa21.69■■□□□ 1.06
NKX2-1-201ENST00000354822 PAIP1Q9H074 479 aaKnown RBP21.69■■□□□ 1.06
NKX2-1-201ENST00000354822 CCL26Q9Y258 94 aa21.69■■□□□ 1.06
NKX2-1-201ENST00000354822 PCDHB14Q9Y5E9 798 aa21.69■■□□□ 1.06
NKX2-1-201ENST00000354822 C16orf96A6NNT2 1141 aa21.68■■□□□ 1.06
NKX2-1-201ENST00000354822 FAM220BPB1ANY3 271 aa21.68■■□□□ 1.06
NKX2-1-201ENST00000354822 QSOX1O00391 747 aa21.68■■□□□ 1.06
NKX2-1-201ENST00000354822 CCL16O15467 120 aa21.68■■□□□ 1.06
NKX2-1-201ENST00000354822 VIPR1P32241 457 aa21.68■■□□□ 1.06
NKX2-1-201ENST00000354822 EPS8Q12929 822 aa21.68■■□□□ 1.06
NKX2-1-201ENST00000354822 MYBPC3Q14896 1274 aa21.68■■□□□ 1.06
NKX2-1-201ENST00000354822 OTUD3Q5T2D3 398 aaPredicted RBP21.68■■□□□ 1.06
NKX2-1-201ENST00000354822 CCNYL2Q5T2Q4 361 aa21.68■■□□□ 1.06
NKX2-1-201ENST00000354822 IKZF5Q9H5V7 419 aa21.68■■□□□ 1.06
NKX2-1-201ENST00000354822 MAGIXQ9H6Y5 334 aa21.68■■□□□ 1.06
NKX2-1-201ENST00000354822 IL23AQ9NPF7 189 aa21.68■■□□□ 1.06
NKX2-1-201ENST00000354822 G3V2T6 193 aa21.68■■□□□ 1.06
NKX2-1-201ENST00000354822 ALPLP05186 524 aa21.68■■□□□ 1.06
NKX2-1-201ENST00000354822 NRIP1P48552 1158 aa21.68■■□□□ 1.06
NKX2-1-201ENST00000354822 ZXDCQ2QGD7 858 aaPredicted RBP21.68■■□□□ 1.06
NKX2-1-201ENST00000354822 GPR149Q86SP6 731 aa21.68■■□□□ 1.06
NKX2-1-201ENST00000354822 CALHM3Q86XJ0 350 aa21.68■■□□□ 1.06
NKX2-1-201ENST00000354822 CLEC4FQ8N1N0 589 aa21.68■■□□□ 1.06
NKX2-1-201ENST00000354822 SVOPLQ8N434 492 aa21.68■■□□□ 1.06
NKX2-1-201ENST00000354822 ARMC5Q96C12 935 aa21.68■■□□□ 1.06
NKX2-1-201ENST00000354822 SLC47A1Q96FL8 570 aa21.68■■□□□ 1.06
NKX2-1-201ENST00000354822 AURKBQ96GD4 344 aaPredicted RBP21.68■■□□□ 1.06
NKX2-1-201ENST00000354822 HEPHQ9BQS7 1158 aa21.68■■□□□ 1.06
NKX2-1-201ENST00000354822 CD84Q9UIB8 345 aa21.68■■□□□ 1.06
NKX2-1-201ENST00000354822 DLGAP4Q9Y2H0 992 aa21.68■■□□□ 1.06
NKX2-1-201ENST00000354822 UGDHO60701 494 aa21.67■■□□□ 1.06
NKX2-1-201ENST00000354822 FTH1P02794 183 aa21.67■■□□□ 1.06
NKX2-1-201ENST00000354822 LINC00271P0C7V0 271 aa21.67■■□□□ 1.06
NKX2-1-201ENST00000354822 CCR2P41597 374 aa21.67■■□□□ 1.06
NKX2-1-201ENST00000354822 FRG2Q64ET8 278 aa21.67■■□□□ 1.06
NKX2-1-201ENST00000354822 NEK5Q6P3R8 708 aa21.67■■□□□ 1.06
NKX2-1-201ENST00000354822 STK32CQ86UX6 486 aa21.67■■□□□ 1.06
NKX2-1-201ENST00000354822 VRK3Q8IV63 474 aa21.67■■□□□ 1.06
NKX2-1-201ENST00000354822 CLHC1Q8NHS4 586 aa21.67■■□□□ 1.06
NKX2-1-201ENST00000354822 FBXO30Q8TB52 745 aa21.67■■□□□ 1.06
NKX2-1-201ENST00000354822 FRG2BQ96QU4 278 aa21.67■■□□□ 1.06
NKX2-1-201ENST00000354822 P2RY13Q9BPV8 354 aa21.67■■□□□ 1.06
NKX2-1-201ENST00000354822 TLR9Q9NR96 1032 aa21.67■■□□□ 1.06
NKX2-1-201ENST00000354822 DCAF13Q9NV06 445 aaKnown RBP21.67■■□□□ 1.06
NKX2-1-201ENST00000354822 WBP1LQ9NX94 342 aa21.67■■□□□ 1.06
NKX2-1-201ENST00000354822 TBC1D14Q9P2M4 693 aa21.67■■□□□ 1.06
NKX2-1-201ENST00000354822 SLC22A14Q9Y267 594 aa21.67■■□□□ 1.06
NKX2-1-201ENST00000354822 AREL1O15033 823 aa21.67■■□□□ 1.06
NKX2-1-201ENST00000354822 CLIC3O95833 236 aa21.67■■□□□ 1.06
NKX2-1-201ENST00000354822 CST1P01037 141 aa21.67■■□□□ 1.06
NKX2-1-201ENST00000354822 THRBP10828 461 aa21.67■■□□□ 1.06
NKX2-1-201ENST00000354822 PLA2G4EQ3MJ16 856 aa21.67■■□□□ 1.06
NKX2-1-201ENST00000354822 ARHGAP15Q53QZ3 475 aa21.67■■□□□ 1.06
NKX2-1-201ENST00000354822 LIPJQ5W064 366 aa21.67■■□□□ 1.06
NKX2-1-201ENST00000354822 FBXO46Q6PJ61 603 aaPredicted RBP21.67■■□□□ 1.06
NKX2-1-201ENST00000354822 GCNT7Q6ZNI0 430 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms