RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 CES5AQ6NT32 575 aa11.16□□□□□ -0.62
CAPN9-202ENST00000354537 ERICH5Q6P6B1 374 aa11.16□□□□□ -0.62
CAPN9-202ENST00000354537 ABI1Q8IZP0 508 aa11.16□□□□□ -0.62
CAPN9-202ENST00000354537 TTC29Q8NA56 475 aaPredicted RBP11.16□□□□□ -0.62
CAPN9-202ENST00000354537 MS4A4AQ96JQ5 239 aa11.16□□□□□ -0.62
CAPN9-202ENST00000354537 YIPF2Q9BWQ6 316 aa11.16□□□□□ -0.62
CAPN9-202ENST00000354537 FAM126AQ9BYI3 521 aaPredicted RBP11.16□□□□□ -0.62
CAPN9-202ENST00000354537 ALOXE3Q9BYJ1 711 aa11.16□□□□□ -0.62
CAPN9-202ENST00000354537 CD244Q9BZW8 370 aa11.16□□□□□ -0.62
CAPN9-202ENST00000354537 RIBC2Q9H4K1 309 aa11.16□□□□□ -0.62
CAPN9-202ENST00000354537 EHD1Q9H4M9 534 aa11.16□□□□□ -0.62
CAPN9-202ENST00000354537 SERHLQ9NQF3 203 aa11.16□□□□□ -0.62
CAPN9-202ENST00000354537 TLR8Q9NR97 1041 aaKnown RBP11.16□□□□□ -0.62
CAPN9-202ENST00000354537 ZNF229Q9UJW7 825 aa11.16□□□□□ -0.62
CAPN9-202ENST00000354537 NPIPB8E9PQR5 432 aa11.15□□□□□ -0.62
CAPN9-202ENST00000354537 MANBAO00462 879 aa11.15□□□□□ -0.62
CAPN9-202ENST00000354537 RGS13O14921 159 aa11.15□□□□□ -0.62
CAPN9-202ENST00000354537 TAPBPO15533 448 aa11.15□□□□□ -0.62
CAPN9-202ENST00000354537 MITFO75030 526 aaPredicted RBP11.15□□□□□ -0.62
CAPN9-202ENST00000354537 PRPH2P23942 346 aa11.15□□□□□ -0.62
CAPN9-202ENST00000354537 TPTEP56180 551 aa11.15□□□□□ -0.62
CAPN9-202ENST00000354537 MGAT3Q09327 533 aa11.15□□□□□ -0.62
CAPN9-202ENST00000354537 DSC3Q14574 896 aa11.15□□□□□ -0.62
CAPN9-202ENST00000354537 AAK1Q2M2I8 961 aa11.15□□□□□ -0.62
CAPN9-202ENST00000354537 CARD16Q5EG05 197 aa11.15□□□□□ -0.62
CAPN9-202ENST00000354537 PRAMEF19Q5SWL8 479 aa11.15□□□□□ -0.62
CAPN9-202ENST00000354537 USP43Q70EL4 1123 aa11.15□□□□□ -0.62
CAPN9-202ENST00000354537 DSG4Q86SJ6 1040 aa11.15□□□□□ -0.62
CAPN9-202ENST00000354537 CPA6Q8N4T0 437 aa11.15□□□□□ -0.62
CAPN9-202ENST00000354537 DCBLD1Q8N8Z6 715 aa11.15□□□□□ -0.62
CAPN9-202ENST00000354537 TESCQ96BS2 214 aa11.15□□□□□ -0.62
CAPN9-202ENST00000354537 HOXD1Q9GZZ0 328 aa11.15□□□□□ -0.62
CAPN9-202ENST00000354537 DCSTAMPQ9H295 470 aa11.15□□□□□ -0.62
CAPN9-202ENST00000354537 ZNF408Q9H9D4 720 aa11.15□□□□□ -0.62
CAPN9-202ENST00000354537 RDH14Q9HBH5 336 aa11.15□□□□□ -0.62
CAPN9-202ENST00000354537 VNN3Q9NY84 501 aa11.15□□□□□ -0.62
CAPN9-202ENST00000354537 NPAP1Q9NZP6 1156 aa11.15□□□□□ -0.62
CAPN9-202ENST00000354537 CCDC59Q9P031 241 aaKnown RBP11.15□□□□□ -0.62
CAPN9-202ENST00000354537 EVLQ9UI08 416 aaPredicted RBP11.15□□□□□ -0.62
CAPN9-202ENST00000354537 ANGPTL3Q9Y5C1 460 aa11.15□□□□□ -0.62
CAPN9-202ENST00000354537 SLC12A8A0AV02 714 aa11.15□□□□□ -0.62
CAPN9-202ENST00000354537 ANKRD66B4E2M5 251 aa11.15□□□□□ -0.62
CAPN9-202ENST00000354537 F5H5T6 163 aa11.15□□□□□ -0.62
CAPN9-202ENST00000354537 S100A3P33764 101 aa11.15□□□□□ -0.62
CAPN9-202ENST00000354537 TRPC1P48995 793 aa11.15□□□□□ -0.62
CAPN9-202ENST00000354537 PXNP49023 591 aaPredicted RBP11.15□□□□□ -0.62
CAPN9-202ENST00000354537 CDH4P55283 916 aa11.15□□□□□ -0.62
CAPN9-202ENST00000354537 PLIN5Q00G26 463 aa11.15□□□□□ -0.62
CAPN9-202ENST00000354537 SIM2Q14190 667 aaPredicted RBP11.15□□□□□ -0.62
CAPN9-202ENST00000354537 TOR1AIP1Q5JTV8 583 aa11.15□□□□□ -0.62
CAPN9-202ENST00000354537 MORN1Q5T089 497 aa11.15□□□□□ -0.62
CAPN9-202ENST00000354537 ATAD3BQ5T9A4 648 aa11.15□□□□□ -0.62
CAPN9-202ENST00000354537 NADSYN1Q6IA69 706 aa11.15□□□□□ -0.62
CAPN9-202ENST00000354537 FAHD1Q6P587 224 aa11.15□□□□□ -0.62
CAPN9-202ENST00000354537 AMER2Q8N7J2 671 aa11.15□□□□□ -0.62
CAPN9-202ENST00000354537 UPF1Q92900 1129 aaKnown RBP eCLIP11.15□□□□□ -0.62
CAPN9-202ENST00000354537 HHIPQ96QV1 700 aa11.15□□□□□ -0.62
CAPN9-202ENST00000354537 CEP44Q9C0F1 390 aa11.15□□□□□ -0.62
CAPN9-202ENST00000354537 EXD2Q9NVH0 621 aa11.15□□□□□ -0.62
CAPN9-202ENST00000354537 ABI2Q9NYB9 513 aaPredicted RBP11.15□□□□□ -0.62
CAPN9-202ENST00000354537 SPATA7Q9P0W8 599 aa11.15□□□□□ -0.62
CAPN9-202ENST00000354537 OPTCQ9UBM4 332 aa11.15□□□□□ -0.62
CAPN9-202ENST00000354537 KLQ9UEF7 1012 aa11.15□□□□□ -0.62
CAPN9-202ENST00000354537 PCDHB5Q9Y5E4 795 aa11.15□□□□□ -0.62
CAPN9-202ENST00000354537 TMEM189-UBE2V1I3L0A0 370 aa11.14□□□□□ -0.63
CAPN9-202ENST00000354537 ASNA1O43681 348 aa11.14□□□□□ -0.63
CAPN9-202ENST00000354537 DYRK3O43781 588 aa11.14□□□□□ -0.63
CAPN9-202ENST00000354537 F11P03951 625 aa11.14□□□□□ -0.63
CAPN9-202ENST00000354537 BCKDHAP12694 445 aa11.14□□□□□ -0.63
CAPN9-202ENST00000354537 DGKAP23743 735 aa11.14□□□□□ -0.63
CAPN9-202ENST00000354537 FSHRP23945 695 aa11.14□□□□□ -0.63
CAPN9-202ENST00000354537 MAPK1P28482 360 aa11.14□□□□□ -0.63
CAPN9-202ENST00000354537 PTPN6P29350 595 aa11.14□□□□□ -0.63
CAPN9-202ENST00000354537 RPS14P62263 151 aaKnown RBP11.14□□□□□ -0.63
CAPN9-202ENST00000354537 LSM3P62310 102 aaKnown RBP11.14□□□□□ -0.63
CAPN9-202ENST00000354537 ELP6Q0PNE2 266 aa11.14□□□□□ -0.63
CAPN9-202ENST00000354537 TBCEQ15813 527 aaPredicted RBP11.14□□□□□ -0.63
CAPN9-202ENST00000354537 FBXO43Q4G163 708 aa11.14□□□□□ -0.63
CAPN9-202ENST00000354537 CATSPEREQ5SY80 951 aa11.14□□□□□ -0.63
CAPN9-202ENST00000354537 LAIR1Q6GTX8 287 aa11.14□□□□□ -0.63
CAPN9-202ENST00000354537 USP50Q70EL3 339 aaPredicted RBP11.14□□□□□ -0.63
CAPN9-202ENST00000354537 DEFB132Q7Z7B7 95 aa11.14□□□□□ -0.63
CAPN9-202ENST00000354537 CIR1Q86X95 450 aaPredicted RBP11.14□□□□□ -0.63
CAPN9-202ENST00000354537 NAT16Q8N8M0 369 aa11.14□□□□□ -0.63
CAPN9-202ENST00000354537 PSMA8Q8TAA3 256 aa11.14□□□□□ -0.63
CAPN9-202ENST00000354537 NUDT8Q8WV74 236 aa11.14□□□□□ -0.63
CAPN9-202ENST00000354537 ZMYM5Q9UJ78 669 aa11.14□□□□□ -0.63
CAPN9-202ENST00000354537 ZNF490Q9ULM2 529 aaPredicted RBP11.14□□□□□ -0.63
CAPN9-202ENST00000354537 TRIP12Q14669 1992 aaPredicted RBP11.14□□□□□ -0.63
CAPN9-202ENST00000354537 CCL15-CCL14A0A0B4J2E2 113 aa11.14□□□□□ -0.63
CAPN9-202ENST00000354537 SERTM1A2A2V5 107 aa11.14□□□□□ -0.63
CAPN9-202ENST00000354537 FAM47E-STBD1D6RA91 191 aa11.14□□□□□ -0.63
CAPN9-202ENST00000354537 SNPHO15079 494 aa11.14□□□□□ -0.63
CAPN9-202ENST00000354537 FADS2O95864 444 aaKnown RBP11.14□□□□□ -0.63
CAPN9-202ENST00000354537 KRT6AP02538 564 aa11.14□□□□□ -0.63
CAPN9-202ENST00000354537 KRT6BP04259 564 aa11.14□□□□□ -0.63
CAPN9-202ENST00000354537 FABP3P05413 133 aa11.14□□□□□ -0.63
CAPN9-202ENST00000354537 ZNF7P17097 686 aaPredicted RBP11.14□□□□□ -0.63
CAPN9-202ENST00000354537 HOXA9P31269 272 aa11.14□□□□□ -0.63
CAPN9-202ENST00000354537 ETV6P41212 452 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms