RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 STX16-NPEPL1H3BU86 382 aa13.39□□□□□ -0.27
SMC6-201ENST00000351948 AURKAO14965 403 aa13.39□□□□□ -0.27
SMC6-201ENST00000351948 SLC25A12O75746 678 aa13.39□□□□□ -0.27
SMC6-201ENST00000351948 CDKN2DP55273 166 aa13.39□□□□□ -0.27
SMC6-201ENST00000351948 AP1S2P56377 157 aa13.39□□□□□ -0.27
SMC6-201ENST00000351948 USP39Q53GS9 565 aaKnown RBP13.39□□□□□ -0.27
SMC6-201ENST00000351948 C8orf59Q8N0T1 100 aaPredicted RBP13.39□□□□□ -0.27
SMC6-201ENST00000351948 KIAA1191Q96A73 305 aa13.39□□□□□ -0.27
SMC6-201ENST00000351948 ARMC5Q96C12 935 aa13.39□□□□□ -0.27
SMC6-201ENST00000351948 PGAP3Q96FM1 320 aaPredicted RBP13.39□□□□□ -0.27
SMC6-201ENST00000351948 DUSP26Q9BV47 211 aa13.39□□□□□ -0.27
SMC6-201ENST00000351948 KLF16Q9BXK1 252 aaPredicted RBP13.39□□□□□ -0.27
SMC6-201ENST00000351948 PCDHAC1Q9H158 963 aa13.39□□□□□ -0.27
SMC6-201ENST00000351948 MYRFQ9Y2G1 1151 aa13.39□□□□□ -0.27
SMC6-201ENST00000351948 hCG_2039718K7EN88 272 aa13.39□□□□□ -0.27
SMC6-201ENST00000351948 FAM189A1O60320 539 aa13.39□□□□□ -0.27
SMC6-201ENST00000351948 SHOX2O60902 331 aaPredicted RBP13.39□□□□□ -0.27
SMC6-201ENST00000351948 S1PR4O95977 384 aa13.39□□□□□ -0.27
SMC6-201ENST00000351948 BPIP17213 487 aa13.39□□□□□ -0.27
SMC6-201ENST00000351948 NTSR1P30989 418 aa13.39□□□□□ -0.27
SMC6-201ENST00000351948 DGKKQ5KSL6 1271 aa13.39□□□□□ -0.27
SMC6-201ENST00000351948 LINC01465Q8N7H1 131 aa13.39□□□□□ -0.27
SMC6-201ENST00000351948 KAT2AQ92830 837 aa13.39□□□□□ -0.27
SMC6-201ENST00000351948 OLFM1Q99784 485 aa13.39□□□□□ -0.27
SMC6-201ENST00000351948 DERL2Q9GZP9 239 aa13.39□□□□□ -0.27
SMC6-201ENST00000351948 MAGEL2Q9UJ55 1249 aa13.39□□□□□ -0.27
SMC6-201ENST00000351948 GLOD5A6NK44 160 aa13.39□□□□□ -0.27
SMC6-201ENST00000351948 FAM155AB1AL88 458 aaPredicted RBP13.39□□□□□ -0.27
SMC6-201ENST00000351948 SLC6A11P48066 632 aa13.39□□□□□ -0.27
SMC6-201ENST00000351948 ZNF789Q5FWF6 425 aa13.39□□□□□ -0.27
SMC6-201ENST00000351948 PLEKHM3Q6ZWE6 761 aa13.39□□□□□ -0.27
SMC6-201ENST00000351948 SETD9Q8NE22 299 aa13.39□□□□□ -0.27
SMC6-201ENST00000351948 SMPDL3AQ92484 453 aa13.39□□□□□ -0.27
SMC6-201ENST00000351948 GSDMCQ9BYG8 508 aa13.39□□□□□ -0.27
SMC6-201ENST00000351948 EPB41L4BQ9H329 900 aa13.39□□□□□ -0.27
SMC6-201ENST00000351948 ZDHHC7Q9NXF8 308 aa13.39□□□□□ -0.27
SMC6-201ENST00000351948 B3GALT2O43825 422 aa13.38□□□□□ -0.27
SMC6-201ENST00000351948 APOA1P02647 267 aa13.38□□□□□ -0.27
SMC6-201ENST00000351948 ASGR2P07307 311 aa13.38□□□□□ -0.27
SMC6-201ENST00000351948 PRPS2P11908 318 aa13.38□□□□□ -0.27
SMC6-201ENST00000351948 PPIBP23284 216 aaKnown RBP13.38□□□□□ -0.27
SMC6-201ENST00000351948 ARRB1P49407 418 aaPredicted RBP13.38□□□□□ -0.27
SMC6-201ENST00000351948 HNMTP50135 292 aa13.38□□□□□ -0.27
SMC6-201ENST00000351948 NUP107P57740 925 aa13.38□□□□□ -0.27
SMC6-201ENST00000351948 SLC18A2Q05940 514 aa13.38□□□□□ -0.27
SMC6-201ENST00000351948 MBTPS1Q14703 1052 aa13.38□□□□□ -0.27
SMC6-201ENST00000351948 SLC9A5Q14940 896 aa13.38□□□□□ -0.27
SMC6-201ENST00000351948 GCNT6Q5T4J0 391 aa13.38□□□□□ -0.27
SMC6-201ENST00000351948 ANKRD26P1Q6NSI1 321 aa13.38□□□□□ -0.27
SMC6-201ENST00000351948 METTL27Q8N6F8 245 aaPredicted RBP13.38□□□□□ -0.27
SMC6-201ENST00000351948 NUSAP1Q9BXS6 441 aaKnown RBP13.38□□□□□ -0.27
SMC6-201ENST00000351948 PAPPAQ13219 1627 aa13.38□□□□□ -0.27
SMC6-201ENST00000351948 GSRP00390 522 aa13.38□□□□□ -0.27
SMC6-201ENST00000351948 C8orf89P0DMQ9 161 aa13.38□□□□□ -0.27
SMC6-201ENST00000351948 TFPIP10646 304 aa13.38□□□□□ -0.27
SMC6-201ENST00000351948 CDH1P12830 882 aa13.38□□□□□ -0.27
SMC6-201ENST00000351948 MAGEA10P43363 369 aaPredicted RBP13.38□□□□□ -0.27
SMC6-201ENST00000351948 ERVK-8P63133 956 aa13.38□□□□□ -0.27
SMC6-201ENST00000351948 RPS21P63220 83 aaKnown RBP13.38□□□□□ -0.27
SMC6-201ENST00000351948 BTN3A2P78410 334 aa13.38□□□□□ -0.27
SMC6-201ENST00000351948 OR4F3Q6IEY1 312 aa13.38□□□□□ -0.27
SMC6-201ENST00000351948 PGAM4Q8N0Y7 254 aa13.38□□□□□ -0.27
SMC6-201ENST00000351948 PHTF2Q8N3S3 785 aa13.38□□□□□ -0.27
SMC6-201ENST00000351948 AADATQ8N5Z0 425 aa13.38□□□□□ -0.27
SMC6-201ENST00000351948 DENND2DQ9H6A0 471 aaPredicted RBP13.38□□□□□ -0.27
SMC6-201ENST00000351948 IKZF3Q9UKT9 509 aa13.38□□□□□ -0.27
SMC6-201ENST00000351948 USP3Q9Y6I4 520 aa13.38□□□□□ -0.27
SMC6-201ENST00000351948 ZNF860A6NHJ4 632 aa13.38□□□□□ -0.27
SMC6-201ENST00000351948 PGM3O95394 542 aa13.38□□□□□ -0.27
SMC6-201ENST00000351948 ITGA2P17301 1181 aa13.38□□□□□ -0.27
SMC6-201ENST00000351948 MYL12AP19105 171 aa13.38□□□□□ -0.27
SMC6-201ENST00000351948 RXRGP48443 463 aa13.38□□□□□ -0.27
SMC6-201ENST00000351948 SIM2Q14190 667 aaPredicted RBP13.38□□□□□ -0.27
SMC6-201ENST00000351948 MACC1Q6ZN28 852 aa13.38□□□□□ -0.27
SMC6-201ENST00000351948 TTC29Q8NA56 475 aaPredicted RBP13.38□□□□□ -0.27
SMC6-201ENST00000351948 OR52L1Q8NGH7 329 aa13.38□□□□□ -0.27
SMC6-201ENST00000351948 PIGKQ92643 395 aa13.38□□□□□ -0.27
SMC6-201ENST00000351948 EFCAB11Q9BUY7 163 aa13.38□□□□□ -0.27
SMC6-201ENST00000351948 TAS2R1Q9NYW7 299 aa13.38□□□□□ -0.27
SMC6-201ENST00000351948 CAPN8A6NHC0 703 aa13.38□□□□□ -0.27
SMC6-201ENST00000351948 POU2F1P14859 743 aa13.38□□□□□ -0.27
SMC6-201ENST00000351948 NCBP2P52298 156 aaKnown RBP eCLIP13.38□□□□□ -0.276e-13■■■■■ 37.3
SMC6-201ENST00000351948 EIF4HQ15056 248 aaKnown RBP13.38□□□□□ -0.27
SMC6-201ENST00000351948 SHHQ15465 462 aa13.38□□□□□ -0.27
SMC6-201ENST00000351948 KLHL12Q53G59 568 aa13.38□□□□□ -0.27
SMC6-201ENST00000351948 FAM26DQ5JW98 314 aa13.38□□□□□ -0.27
SMC6-201ENST00000351948 LHX8Q68G74 356 aa13.38□□□□□ -0.27
SMC6-201ENST00000351948 TMEM135Q86UB9 458 aa13.38□□□□□ -0.27
SMC6-201ENST00000351948 CLVS1Q8IUQ0 354 aaPredicted RBP13.38□□□□□ -0.27
SMC6-201ENST00000351948 RORBQ92753 470 aa13.38□□□□□ -0.27
SMC6-201ENST00000351948 CADM1Q9BY67 442 aaKnown RBP13.38□□□□□ -0.27
SMC6-201ENST00000351948 RBCK1Q9BYM8 510 aa13.38□□□□□ -0.27
SMC6-201ENST00000351948 ZCCHC3Q9NUD5 404 aaKnown RBP13.38□□□□□ -0.27
SMC6-201ENST00000351948 DGKBQ9Y6T7 804 aa13.38□□□□□ -0.27
SMC6-201ENST00000351948 XIRP1Q702N8 1843 aaKnown RBP13.37□□□□□ -0.27
SMC6-201ENST00000351948 TNFRSF10BO14763 440 aa13.37□□□□□ -0.27
SMC6-201ENST00000351948 GNB5O14775 395 aa13.37□□□□□ -0.27
SMC6-201ENST00000351948 SDC3O75056 442 aa13.37□□□□□ -0.27
SMC6-201ENST00000351948 MTHFD1P11586 935 aaKnown RBP13.37□□□□□ -0.27
SMC6-201ENST00000351948 ACRV1P26436 265 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms