RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 TBC1D3FA6NER0 549 aaPredicted RBP10.15□□□□□ -0.78
SMPD4-201ENST00000351288 CCDC85CA6NKD9 419 aa10.15□□□□□ -0.78
SMPD4-201ENST00000351288 TBC1D3LB9A6J9 549 aa10.15□□□□□ -0.78
SMPD4-201ENST00000351288 PAK4O96013 591 aaPredicted RBP10.15□□□□□ -0.78
SMPD4-201ENST00000351288 RPS17P08708 135 aaKnown RBP10.15□□□□□ -0.78
SMPD4-201ENST00000351288 TBC1D3HP0C7X1 549 aa10.15□□□□□ -0.78
SMPD4-201ENST00000351288 MYCLP1P12525 358 aaPredicted RBP10.15□□□□□ -0.78
SMPD4-201ENST00000351288 RFX3P48380 749 aa10.15□□□□□ -0.78
SMPD4-201ENST00000351288 ACADVLP49748 655 aa10.15□□□□□ -0.78
SMPD4-201ENST00000351288 CTBSQ01459 385 aa10.15□□□□□ -0.78
SMPD4-201ENST00000351288 ACVR1Q04771 509 aa10.15□□□□□ -0.78
SMPD4-201ENST00000351288 TBC1D3GQ6DHY5 549 aa10.15□□□□□ -0.78
SMPD4-201ENST00000351288 TBC1D3CQ6IPX1 549 aa10.15□□□□□ -0.78
SMPD4-201ENST00000351288 ENPP6Q6UWR7 440 aa10.15□□□□□ -0.78
SMPD4-201ENST00000351288 KIAA1324Q6UXG2 1013 aaKnown RBP10.15□□□□□ -0.78
SMPD4-201ENST00000351288 CARM1Q86X55 608 aa10.15□□□□□ -0.78
SMPD4-201ENST00000351288 TBC1D3Q8IZP1 549 aaPredicted RBP10.15□□□□□ -0.78
SMPD4-201ENST00000351288 OR14C36Q8NHC7 312 aa10.15□□□□□ -0.78
SMPD4-201ENST00000351288 FIBINQ8TAL6 211 aa10.15□□□□□ -0.78
SMPD4-201ENST00000351288 OVCA2Q8WZ82 227 aa10.15□□□□□ -0.78
SMPD4-201ENST00000351288 PANX1Q96RD7 426 aa10.15□□□□□ -0.78
SMPD4-201ENST00000351288 HERC2P3Q9BVR0 1158 aa10.15□□□□□ -0.78
SMPD4-201ENST00000351288 SLC2A11Q9BYW1 496 aa10.15□□□□□ -0.78
SMPD4-201ENST00000351288 ZDHHC3Q9NYG2 299 aa10.15□□□□□ -0.78
SMPD4-201ENST00000351288 VAPAQ9P0L0 249 aa10.15□□□□□ -0.78
SMPD4-201ENST00000351288 PCDHA9Q9Y5H5 950 aa10.15□□□□□ -0.78
SMPD4-201ENST00000351288 FADS3Q9Y5Q0 445 aa10.15□□□□□ -0.78
SMPD4-201ENST00000351288 WDR87Q6ZQQ6 2873 aa10.15□□□□□ -0.79
SMPD4-201ENST00000351288 FAM92AA1XBS5 289 aa10.14□□□□□ -0.79
SMPD4-201ENST00000351288 C16orf96A6NNT2 1141 aa10.14□□□□□ -0.79
SMPD4-201ENST00000351288 H3BNH8 94 aa10.14□□□□□ -0.79
SMPD4-201ENST00000351288 FGF4P08620 206 aa10.14□□□□□ -0.79
SMPD4-201ENST00000351288 GDI1P31150 447 aa10.14□□□□□ -0.79
SMPD4-201ENST00000351288 SOX9P48436 509 aa10.14□□□□□ -0.79
SMPD4-201ENST00000351288 METAP1P53582 386 aa10.14□□□□□ -0.79
SMPD4-201ENST00000351288 NR1H2P55055 460 aa10.14□□□□□ -0.79
SMPD4-201ENST00000351288 CREMQ03060 361 aa10.14□□□□□ -0.79
SMPD4-201ENST00000351288 MERTKQ12866 999 aa10.14□□□□□ -0.79
SMPD4-201ENST00000351288 SPDYE7PQ495Y7 208 aa10.14□□□□□ -0.79
SMPD4-201ENST00000351288 PPP2R2DQ66LE6 453 aa10.14□□□□□ -0.79
SMPD4-201ENST00000351288 SPESP1Q6UW49 350 aa10.14□□□□□ -0.79
SMPD4-201ENST00000351288 HSD11B1LQ7Z5J1 315 aa10.14□□□□□ -0.79
SMPD4-201ENST00000351288 TMEM150AQ86TG1 271 aa10.14□□□□□ -0.79
SMPD4-201ENST00000351288 PLD3Q8IV08 490 aa10.14□□□□□ -0.79
SMPD4-201ENST00000351288 DTWD1Q8N5C7 304 aa10.14□□□□□ -0.79
SMPD4-201ENST00000351288 B4GALNT2Q8NHY0 566 aa10.14□□□□□ -0.79
SMPD4-201ENST00000351288 RHEBL1Q8TAI7 183 aa10.14□□□□□ -0.79
SMPD4-201ENST00000351288 OR8D1Q8WZ84 308 aa10.14□□□□□ -0.79
SMPD4-201ENST00000351288 ZNF696Q9H7X3 374 aa10.14□□□□□ -0.79
SMPD4-201ENST00000351288 PREBQ9HCU5 417 aa10.14□□□□□ -0.79
SMPD4-201ENST00000351288 SLC6A13Q9NSD5 602 aa10.14□□□□□ -0.79
SMPD4-201ENST00000351288 AIG1Q9NVV5 245 aa10.14□□□□□ -0.79
SMPD4-201ENST00000351288 THG1LQ9NWX6 298 aaKnown RBP10.14□□□□□ -0.79
SMPD4-201ENST00000351288 COMMD8Q9NX08 183 aa10.14□□□□□ -0.79
SMPD4-201ENST00000351288 SPTBP11277 2137 aa10.14□□□□□ -0.79
SMPD4-201ENST00000351288 SPTBN2O15020 2390 aa10.14□□□□□ -0.79
SMPD4-201ENST00000351288 K7EPI3 171 aa10.14□□□□□ -0.79
SMPD4-201ENST00000351288 OR7A17O14581 309 aa10.14□□□□□ -0.79
SMPD4-201ENST00000351288 TRMUO75648 421 aaKnown RBP10.14□□□□□ -0.79
SMPD4-201ENST00000351288 DIRAS1O95057 198 aa10.14□□□□□ -0.79
SMPD4-201ENST00000351288 CLDN9O95484 217 aa10.14□□□□□ -0.79
SMPD4-201ENST00000351288 TGFB1P01137 390 aa10.14□□□□□ -0.79
SMPD4-201ENST00000351288 CR2P20023 1033 aa10.14□□□□□ -0.79
SMPD4-201ENST00000351288 HRH2P25021 359 aa10.14□□□□□ -0.79
SMPD4-201ENST00000351288 ZFP36L2P47974 494 aaKnown RBP10.14□□□□□ -0.79
SMPD4-201ENST00000351288 SGCGQ13326 291 aa10.14□□□□□ -0.79
SMPD4-201ENST00000351288 SPIDRQ14159 915 aa10.14□□□□□ -0.79
SMPD4-201ENST00000351288 TMEM31Q5JXX7 168 aa10.14□□□□□ -0.79
SMPD4-201ENST00000351288 IER5LQ5T953 404 aa10.14□□□□□ -0.79
SMPD4-201ENST00000351288 ZSWIM9Q86XI8 627 aa10.14□□□□□ -0.79
SMPD4-201ENST00000351288 APLFQ8IW19 511 aaPredicted RBP10.14□□□□□ -0.79
SMPD4-201ENST00000351288 C10orf111Q8N326 155 aa10.14□□□□□ -0.79
SMPD4-201ENST00000351288 ROPN1LQ96C74 230 aa10.14□□□□□ -0.79
SMPD4-201ENST00000351288 HSPBAP1Q96EW2 488 aa10.14□□□□□ -0.79
SMPD4-201ENST00000351288 CARS2Q9HA77 564 aaKnown RBP10.14□□□□□ -0.79
SMPD4-201ENST00000351288 SGK2Q9HBY8 427 aa10.14□□□□□ -0.79
SMPD4-201ENST00000351288 NUDT4Q9NZJ9 180 aa10.14□□□□□ -0.79
SMPD4-201ENST00000351288 SARDHQ9UL12 918 aa10.14□□□□□ -0.79
SMPD4-201ENST00000351288 ERVW-1Q9UQF0 538 aa10.14□□□□□ -0.79
SMPD4-201ENST00000351288 GPSM3Q9Y4H4 160 aa10.14□□□□□ -0.79
SMPD4-201ENST00000351288 ASLP04424 464 aa10.14□□□□□ -0.79
SMPD4-201ENST00000351288 ATP1B2P14415 290 aaPredicted RBP10.14□□□□□ -0.79
SMPD4-201ENST00000351288 IL7RP16871 459 aa10.14□□□□□ -0.79
SMPD4-201ENST00000351288 LHCGRP22888 699 aa10.14□□□□□ -0.79
SMPD4-201ENST00000351288 ACRV1P26436 265 aa10.14□□□□□ -0.79
SMPD4-201ENST00000351288 POLR2IP36954 125 aaKnown RBP10.14□□□□□ -0.79
SMPD4-201ENST00000351288 PRKAG1P54619 331 aa10.14□□□□□ -0.79
SMPD4-201ENST00000351288 TRAP1Q12931 704 aaKnown RBP10.14□□□□□ -0.79
SMPD4-201ENST00000351288 ZCCHC8Q6NZY4 707 aaKnown RBP10.14□□□□□ -0.79
SMPD4-201ENST00000351288 C8orf82Q6P1X6 216 aaPredicted RBP10.14□□□□□ -0.79
SMPD4-201ENST00000351288 GPR150Q8NGU9 434 aa10.14□□□□□ -0.79
SMPD4-201ENST00000351288 BPIFB1Q8TDL5 484 aa10.14□□□□□ -0.79
SMPD4-201ENST00000351288 JPH3Q8WXH2 748 aaPredicted RBP10.14□□□□□ -0.79
SMPD4-201ENST00000351288 TFAP2CQ92754 450 aa10.14□□□□□ -0.79
SMPD4-201ENST00000351288 HOPXQ9BPY8 73 aaPredicted RBP10.14□□□□□ -0.79
SMPD4-201ENST00000351288 RBM38Q9H0Z9 239 aaKnown RBP10.14□□□□□ -0.79
SMPD4-201ENST00000351288 ACTL8Q9H568 366 aa10.14□□□□□ -0.79
SMPD4-201ENST00000351288 POLR1BQ9H9Y6 1135 aa10.14□□□□□ -0.79
SMPD4-201ENST00000351288 AGPAT4Q9NRZ5 378 aa10.14□□□□□ -0.79
SMPD4-201ENST00000351288 IL36AQ9UHA7 158 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms