RNA–Protein interactions for RNA: ENST00000350697.7

SEC13-202, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SEC13, Length 1,425 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-202ENST00000350697 PRDX3P30048 256 aaKnown RBP13.49□□□□□ -0.25
SEC13-202ENST00000350697 KPNA2P52292 529 aaKnown RBP13.49□□□□□ -0.25
SEC13-202ENST00000350697 KIR2DS3Q14952 304 aa13.49□□□□□ -0.25
SEC13-202ENST00000350697 CYP2A13Q16696 494 aa13.49□□□□□ -0.25
SEC13-202ENST00000350697 CACHD1Q5VU97 1274 aa13.49□□□□□ -0.25
SEC13-202ENST00000350697 CARFQ8N187 725 aa13.49□□□□□ -0.25
SEC13-202ENST00000350697 LINC01555Q8NAE3 123 aa13.49□□□□□ -0.25
SEC13-202ENST00000350697 AGBL5Q8NDL9 886 aa13.49□□□□□ -0.25
SEC13-202ENST00000350697 WDR36Q8NI36 951 aaKnown RBP13.49□□□□□ -0.25
SEC13-202ENST00000350697 HMGCLL1Q8TB92 370 aa13.49□□□□□ -0.25
SEC13-202ENST00000350697 DENND1AQ8TEH3 1009 aa13.49□□□□□ -0.25
SEC13-202ENST00000350697 SLC22A18Q96BI1 424 aa13.49□□□□□ -0.25
SEC13-202ENST00000350697 HIST1H2AHQ96KK5 128 aa13.49□□□□□ -0.25
SEC13-202ENST00000350697 UBXN10Q96LJ8 280 aa13.49□□□□□ -0.25
SEC13-202ENST00000350697 PKP4Q99569 1192 aa13.49□□□□□ -0.25
SEC13-202ENST00000350697 CMKLR1Q99788 373 aa13.49□□□□□ -0.25
SEC13-202ENST00000350697 HIST1H2AJQ99878 128 aa13.49□□□□□ -0.25
SEC13-202ENST00000350697 H2AFJQ9BTM1 129 aa13.49□□□□□ -0.25
SEC13-202ENST00000350697 TRIM54Q9BYV2 358 aa13.49□□□□□ -0.25
SEC13-202ENST00000350697 PPCSQ9HAB8 311 aa13.49□□□□□ -0.25
SEC13-202ENST00000350697 ACTR10Q9NZ32 417 aa13.49□□□□□ -0.25
SEC13-202ENST00000350697 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.49□□□□□ -0.25
SEC13-202ENST00000350697 SEMA5BQ9P283 1151 aa13.49□□□□□ -0.25
SEC13-202ENST00000350697 TLK1Q9UKI8 766 aa13.49□□□□□ -0.25
SEC13-202ENST00000350697 NOVA2Q9UNW9 492 aaKnown RBP13.49□□□□□ -0.25
SEC13-202ENST00000350697 KIF1CO43896 1103 aaKnown RBP13.48□□□□□ -0.25
SEC13-202ENST00000350697 SLC16A8O95907 504 aa13.48□□□□□ -0.25
SEC13-202ENST00000350697 ALDOAP04075 364 aaKnown RBP13.48□□□□□ -0.25
SEC13-202ENST00000350697 SNRPAP09012 282 aaKnown RBP13.48□□□□□ -0.25
SEC13-202ENST00000350697 TYK2P29597 1187 aa13.48□□□□□ -0.25
SEC13-202ENST00000350697 CSTF2P33240 577 aaKnown RBP eCLIP13.48□□□□□ -0.256e-12■■■□□ 17.9
SEC13-202ENST00000350697 SLC26A3P40879 764 aa13.48□□□□□ -0.25
SEC13-202ENST00000350697 CSRP3P50461 194 aa13.48□□□□□ -0.25
SEC13-202ENST00000350697 AP1S2P56377 157 aa13.48□□□□□ -0.25
SEC13-202ENST00000350697 ATP6V0D1P61421 351 aa13.48□□□□□ -0.25
SEC13-202ENST00000350697 CSHL1Q14406 222 aa13.48□□□□□ -0.25
SEC13-202ENST00000350697 C16orf72Q14CZ0 275 aa13.48□□□□□ -0.25
SEC13-202ENST00000350697 PHKG1Q16816 387 aa13.48□□□□□ -0.25
SEC13-202ENST00000350697 TAF1BQ53T94 588 aaPredicted RBP13.48□□□□□ -0.25
SEC13-202ENST00000350697 SPESP1Q6UW49 350 aa13.48□□□□□ -0.25
SEC13-202ENST00000350697 SBSNQ6UWP8 590 aa13.48□□□□□ -0.25
SEC13-202ENST00000350697 RAB11FIP2Q7L804 512 aa13.48□□□□□ -0.25
SEC13-202ENST00000350697 ADAMTSL2Q86TH1 951 aa13.48□□□□□ -0.25
SEC13-202ENST00000350697 TBC1D1Q86TI0 1168 aaPredicted RBP13.48□□□□□ -0.25
SEC13-202ENST00000350697 MREGQ8N565 214 aa13.48□□□□□ -0.25
SEC13-202ENST00000350697 ISL2Q96A47 359 aa13.48□□□□□ -0.25
SEC13-202ENST00000350697 MTBPQ96DY7 904 aa13.48□□□□□ -0.25
SEC13-202ENST00000350697 CCDC138Q96M89 665 aa13.48□□□□□ -0.25
SEC13-202ENST00000350697 MAP3K3Q99759 626 aa13.48□□□□□ -0.25
SEC13-202ENST00000350697 NRSN2Q9GZP1 204 aa13.48□□□□□ -0.25
SEC13-202ENST00000350697 POLR1BQ9H9Y6 1135 aa13.48□□□□□ -0.25
SEC13-202ENST00000350697 C1GALT1Q9NS00 363 aa13.48□□□□□ -0.25
SEC13-202ENST00000350697 SPHK1Q9NYA1 384 aa13.48□□□□□ -0.25
SEC13-202ENST00000350697 PSMC3IPQ9P2W1 217 aaPredicted RBP13.48□□□□□ -0.25
SEC13-202ENST00000350697 CTNNAL1Q9UBT7 734 aa13.48□□□□□ -0.25
SEC13-202ENST00000350697 ACOT9Q9Y305 439 aa13.48□□□□□ -0.25
SEC13-202ENST00000350697 LOXL2Q9Y4K0 774 aa13.48□□□□□ -0.25
SEC13-202ENST00000350697 A0A087X1B8 175 aa13.47□□□□□ -0.25
SEC13-202ENST00000350697 IQANK1A0A1B0GTG1 560 aa13.47□□□□□ -0.25
SEC13-202ENST00000350697 NPEPPSL1A6NEC2 478 aa13.47□□□□□ -0.25
SEC13-202ENST00000350697 ISM1B1AKI9 464 aa13.47□□□□□ -0.25
SEC13-202ENST00000350697 TRIM49D1C9J1S8 452 aa13.47□□□□□ -0.25
SEC13-202ENST00000350697 CDC7O00311 574 aa13.47□□□□□ -0.25
SEC13-202ENST00000350697 PLD2O14939 933 aa13.47□□□□□ -0.25
SEC13-202ENST00000350697 SHBGP04278 402 aa13.47□□□□□ -0.25
SEC13-202ENST00000350697 C2P06681 752 aa13.47□□□□□ -0.25
SEC13-202ENST00000350697 CD1DP15813 335 aa13.47□□□□□ -0.25
SEC13-202ENST00000350697 UGT2B7P16662 529 aa13.47□□□□□ -0.25
SEC13-202ENST00000350697 CDH3P22223 829 aa13.47□□□□□ -0.25
SEC13-202ENST00000350697 PEBP1P30086 187 aaKnown RBP13.47□□□□□ -0.25
SEC13-202ENST00000350697 MAGEA12P43365 314 aa13.47□□□□□ -0.25
SEC13-202ENST00000350697 LSSP48449 732 aa13.47□□□□□ -0.25
SEC13-202ENST00000350697 PNLIPRP1P54315 467 aa13.47□□□□□ -0.25
SEC13-202ENST00000350697 TSNQ15631 228 aaKnown RBP13.47□□□□□ -0.25
SEC13-202ENST00000350697 C3orf38Q5JPI3 329 aa13.47□□□□□ -0.25
SEC13-202ENST00000350697 BEND6Q5SZJ8 279 aaPredicted RBP13.47□□□□□ -0.25
SEC13-202ENST00000350697 KMT5CQ86Y97 462 aa13.47□□□□□ -0.25
SEC13-202ENST00000350697 SYTL1Q8IYJ3 562 aa13.47□□□□□ -0.25
SEC13-202ENST00000350697 FBXO39Q8N4B4 442 aa13.47□□□□□ -0.25
SEC13-202ENST00000350697 SPATA6LQ8N4H0 392 aa13.47□□□□□ -0.25
SEC13-202ENST00000350697 C2orf73Q8N5S3 287 aaPredicted RBP13.47□□□□□ -0.25
SEC13-202ENST00000350697 LMNTD1Q8N9Z9 388 aa13.47□□□□□ -0.25
SEC13-202ENST00000350697 FLVCR1-AS1Q8TAF5 88 aa13.47□□□□□ -0.25
SEC13-202ENST00000350697 ZNF480Q8WV37 535 aa13.47□□□□□ -0.25
SEC13-202ENST00000350697 KLHL6Q8WZ60 621 aa13.47□□□□□ -0.25
SEC13-202ENST00000350697 SMPDL3AQ92484 453 aa13.47□□□□□ -0.25
SEC13-202ENST00000350697 PKNOX2Q96KN3 472 aa13.47□□□□□ -0.25
SEC13-202ENST00000350697 OR2A14Q96R47 310 aa13.47□□□□□ -0.25
SEC13-202ENST00000350697 PITPNM3Q9BZ71 974 aa13.47□□□□□ -0.25
SEC13-202ENST00000350697 ZNF768Q9H5H4 540 aaKnown RBP13.47□□□□□ -0.25
SEC13-202ENST00000350697 VIPAS39Q9H9C1 493 aa13.47□□□□□ -0.25
SEC13-202ENST00000350697 NMRAL1Q9HBL8 299 aa13.47□□□□□ -0.25
SEC13-202ENST00000350697 ARL15Q9NXU5 204 aa13.47□□□□□ -0.25
SEC13-202ENST00000350697 IKZF3Q9UKT9 509 aa13.47□□□□□ -0.25
SEC13-202ENST00000350697 SATB2Q9UPW6 733 aa13.47□□□□□ -0.25
SEC13-202ENST00000350697 PCM1Q15154 2024 aa13.47□□□□□ -0.25
SEC13-202ENST00000350697 AKAP13Q12802 2813 aa13.47□□□□□ -0.25
SEC13-202ENST00000350697 A0A096LPK6 155 aa13.47□□□□□ -0.25
SEC13-202ENST00000350697 IGHV5-51A0A0C4DH38 117 aa13.47□□□□□ -0.25
SEC13-202ENST00000350697 A0A1W2PNU3 283 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms