RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 TCRBV3S1A0A5B6 114 aa6.73□□□□□ -1.33
TRIM55-203ENST00000350034 MGAT4DA6NG13 374 aa6.73□□□□□ -1.33
TRIM55-203ENST00000350034 C9JVG2 144 aa6.73□□□□□ -1.33
TRIM55-203ENST00000350034 NME4O00746 187 aa6.73□□□□□ -1.33
TRIM55-203ENST00000350034 FFAR3O14843 346 aa6.73□□□□□ -1.33
TRIM55-203ENST00000350034 GPR42O15529 346 aa6.73□□□□□ -1.33
TRIM55-203ENST00000350034 PEX1O43933 1283 aa6.73□□□□□ -1.33
TRIM55-203ENST00000350034 POP7O75817 140 aaKnown RBP6.73□□□□□ -1.33
TRIM55-203ENST00000350034 C1orf105O95561 183 aa6.73□□□□□ -1.33
TRIM55-203ENST00000350034 ADH1BP00325 375 aa6.73□□□□□ -1.33
TRIM55-203ENST00000350034 SLC2A4P14672 509 aa6.73□□□□□ -1.33
TRIM55-203ENST00000350034 JUPP14923 745 aa6.73□□□□□ -1.33
TRIM55-203ENST00000350034 ZNF8P17098 575 aaPredicted RBP6.73□□□□□ -1.33
TRIM55-203ENST00000350034 CD22P20273 847 aa6.73□□□□□ -1.33
TRIM55-203ENST00000350034 ATP6V1C1P21283 382 aa6.73□□□□□ -1.33
TRIM55-203ENST00000350034 C5AR1P21730 350 aa6.73□□□□□ -1.33
TRIM55-203ENST00000350034 VARSP26640 1264 aaKnown RBP6.73□□□□□ -1.33
TRIM55-203ENST00000350034 IMPA1P29218 277 aa6.73□□□□□ -1.33
TRIM55-203ENST00000350034 PDHA2P29803 388 aa6.73□□□□□ -1.33
TRIM55-203ENST00000350034 LTBRP36941 435 aa6.73□□□□□ -1.33
TRIM55-203ENST00000350034 CASP2P42575 452 aa6.73□□□□□ -1.33
TRIM55-203ENST00000350034 ERFP50548 548 aa6.73□□□□□ -1.33
TRIM55-203ENST00000350034 GALK1P51570 392 aa6.73□□□□□ -1.33
TRIM55-203ENST00000350034 SLC7A2P52569 658 aa6.73□□□□□ -1.33
TRIM55-203ENST00000350034 EEFSECP57772 596 aaKnown RBP6.73□□□□□ -1.33
TRIM55-203ENST00000350034 SESN3P58005 492 aa6.73□□□□□ -1.33
TRIM55-203ENST00000350034 RPS14P62263 151 aaKnown RBP6.73□□□□□ -1.33
TRIM55-203ENST00000350034 HMGCS1Q01581 520 aa6.73□□□□□ -1.33
TRIM55-203ENST00000350034 DLX2Q07687 328 aaPredicted RBP6.73□□□□□ -1.33
TRIM55-203ENST00000350034 MAD2L1Q13257 205 aaPredicted RBP6.73□□□□□ -1.33
TRIM55-203ENST00000350034 HTR4Q13639 388 aa6.73□□□□□ -1.33
TRIM55-203ENST00000350034 TAF11Q15544 211 aa6.73□□□□□ -1.33
TRIM55-203ENST00000350034 CST6Q15828 149 aa6.73□□□□□ -1.33
TRIM55-203ENST00000350034 WSCD2Q2TBF2 565 aa6.73□□□□□ -1.33
TRIM55-203ENST00000350034 CCSMST1Q4G0I0 132 aa6.73□□□□□ -1.33
TRIM55-203ENST00000350034 SYTL3Q4VX76 610 aa6.73□□□□□ -1.33
TRIM55-203ENST00000350034 USP39Q53GS9 565 aaKnown RBP6.73□□□□□ -1.33
TRIM55-203ENST00000350034 PAGE3Q5JUK9 113 aa6.73□□□□□ -1.33
TRIM55-203ENST00000350034 LIPJQ5W064 366 aa6.73□□□□□ -1.33
TRIM55-203ENST00000350034 RAET1GQ6H3X3 334 aa6.73□□□□□ -1.33
TRIM55-203ENST00000350034 PNCKQ6P2M8 343 aa6.73□□□□□ -1.33
TRIM55-203ENST00000350034 AGTRAPQ6RW13 159 aa6.73□□□□□ -1.33
TRIM55-203ENST00000350034 LAYNQ6UX15 382 aa6.73□□□□□ -1.33
TRIM55-203ENST00000350034 DLEU7Q6UYE1 221 aa6.73□□□□□ -1.33
TRIM55-203ENST00000350034 NUDT18Q6ZVK8 323 aa6.73□□□□□ -1.33
TRIM55-203ENST00000350034 MTSS1LQ765P7 747 aa6.73□□□□□ -1.33
TRIM55-203ENST00000350034 TRIM74Q86UV6 250 aa6.73□□□□□ -1.33
TRIM55-203ENST00000350034 THOC6Q86W42 341 aaKnown RBP6.73□□□□□ -1.33
TRIM55-203ENST00000350034 LRRC56Q8IYG6 542 aaPredicted RBP6.73□□□□□ -1.33
TRIM55-203ENST00000350034 PQLC1Q8N2U9 271 aa6.73□□□□□ -1.33
TRIM55-203ENST00000350034 RNF148Q8N7C7 305 aa6.73□□□□□ -1.33
TRIM55-203ENST00000350034 GOLM1Q8NBJ4 401 aa6.73□□□□□ -1.33
TRIM55-203ENST00000350034 BHLHE22Q8NFJ8 381 aaPredicted RBP6.73□□□□□ -1.33
TRIM55-203ENST00000350034 OR2L2Q8NH16 312 aa6.73□□□□□ -1.33
TRIM55-203ENST00000350034 WDR20Q8TBZ3 569 aa6.73□□□□□ -1.33
TRIM55-203ENST00000350034 HM13Q8TCT9 377 aa6.73□□□□□ -1.33
TRIM55-203ENST00000350034 CXorf40AQ8TE69 158 aa6.73□□□□□ -1.33
TRIM55-203ENST00000350034 SKA2Q8WVK7 121 aaPredicted RBP6.73□□□□□ -1.33
TRIM55-203ENST00000350034 TMEM125Q96AQ2 219 aa6.73□□□□□ -1.33
TRIM55-203ENST00000350034 WDR34Q96EX3 536 aa6.73□□□□□ -1.33
TRIM55-203ENST00000350034 CMTM7Q96FZ5 175 aa6.73□□□□□ -1.33
TRIM55-203ENST00000350034 NAF1Q96HR8 494 aaKnown RBP6.73□□□□□ -1.33
TRIM55-203ENST00000350034 HIC2Q96JB3 615 aa6.73□□□□□ -1.33
TRIM55-203ENST00000350034 HHIPQ96QV1 700 aa6.73□□□□□ -1.33
TRIM55-203ENST00000350034 OR4K3Q96R72 315 aa6.73□□□□□ -1.33
TRIM55-203ENST00000350034 HBEGFQ99075 208 aa6.73□□□□□ -1.33
TRIM55-203ENST00000350034 GABRG3Q99928 467 aa6.73□□□□□ -1.33
TRIM55-203ENST00000350034 SLC39A3Q9BRY0 314 aa6.73□□□□□ -1.33
TRIM55-203ENST00000350034 TACO1Q9BSH4 297 aaKnown RBP6.73□□□□□ -1.33
TRIM55-203ENST00000350034 OR2AG1Q9H205 316 aa6.73□□□□□ -1.33
TRIM55-203ENST00000350034 DPEP2Q9H4A9 486 aa6.73□□□□□ -1.33
TRIM55-203ENST00000350034 ACTR8Q9H981 624 aa6.73□□□□□ -1.33
TRIM55-203ENST00000350034 C1orf109Q9NX04 203 aa6.73□□□□□ -1.33
TRIM55-203ENST00000350034 GPRC5BQ9NZH0 403 aa6.73□□□□□ -1.33
TRIM55-203ENST00000350034 C6orf203Q9P0P8 240 aaPredicted RBP6.73□□□□□ -1.33
TRIM55-203ENST00000350034 RIMS3Q9UJD0 308 aa6.73□□□□□ -1.33
TRIM55-203ENST00000350034 ZNF490Q9ULM2 529 aaPredicted RBP6.73□□□□□ -1.33
TRIM55-203ENST00000350034 SNX6Q9UNH7 406 aa6.73□□□□□ -1.33
TRIM55-203ENST00000350034 EIF3LQ9Y262 564 aaKnown RBP6.73□□□□□ -1.33
TRIM55-203ENST00000350034 SLC22A14Q9Y267 594 aa6.73□□□□□ -1.33
TRIM55-203ENST00000350034 NEUROG3Q9Y4Z2 214 aa6.73□□□□□ -1.33
TRIM55-203ENST00000350034 DNMT3AQ9Y6K1 912 aaPredicted RBP6.73□□□□□ -1.33
TRIM55-203ENST00000350034 CDH23Q9H251 3354 aa6.73□□□□□ -1.33
TRIM55-203ENST00000350034 PRRC2BQ5JSZ5 2229 aaKnown RBP6.73□□□□□ -1.33
TRIM55-203ENST00000350034 TCF20Q9UGU0 1960 aaKnown RBP6.72□□□□□ -1.33
TRIM55-203ENST00000350034 C15orf38-AP3S2A0A0A6YYH1 394 aa6.72□□□□□ -1.33
TRIM55-203ENST00000350034 KRT87PA6NCN2 255 aa6.72□□□□□ -1.33
TRIM55-203ENST00000350034 PABPN1LA6NDY0 278 aaKnown RBP6.72□□□□□ -1.33
TRIM55-203ENST00000350034 IGLON5A6NGN9 336 aa6.72□□□□□ -1.33
TRIM55-203ENST00000350034 CCDC154A6NI56 674 aa6.72□□□□□ -1.33
TRIM55-203ENST00000350034 H0YIV9 168 aa6.72□□□□□ -1.33
TRIM55-203ENST00000350034 H3BM21 787 aa6.72□□□□□ -1.33
TRIM55-203ENST00000350034 MID1O15344 667 aa6.72□□□□□ -1.33
TRIM55-203ENST00000350034 BAG2O95816 211 aa6.72□□□□□ -1.33
TRIM55-203ENST00000350034 PDYNP01213 254 aa6.72□□□□□ -1.33
TRIM55-203ENST00000350034 PRPS2P11908 318 aa6.72□□□□□ -1.33
TRIM55-203ENST00000350034 BCKDHAP12694 445 aa6.72□□□□□ -1.33
TRIM55-203ENST00000350034 ITPKAP23677 461 aa6.72□□□□□ -1.33
TRIM55-203ENST00000350034 MAP4P27816 1152 aaKnown RBP6.72□□□□□ -1.33
TRIM55-203ENST00000350034 MSX2P35548 267 aaPredicted RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms