RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 ZCCHC18P0CG32 403 aa16.25■□□□□ 0.19
SAMM50-201ENST00000350028 BCKDHAP12694 445 aa16.25■□□□□ 0.19
SAMM50-201ENST00000350028 HLA-EP13747 358 aa16.25■□□□□ 0.19
SAMM50-201ENST00000350028 ACPPP15309 386 aa16.25■□□□□ 0.19
SAMM50-201ENST00000350028 HALP42357 657 aa16.25■□□□□ 0.19
SAMM50-201ENST00000350028 NRIP1P48552 1158 aa16.25■□□□□ 0.19
SAMM50-201ENST00000350028 CHN2P52757 468 aa16.25■□□□□ 0.19
SAMM50-201ENST00000350028 CLDN8P56748 225 aa16.25■□□□□ 0.19
SAMM50-201ENST00000350028 RPS14P62263 151 aaKnown RBP16.25■□□□□ 0.19
SAMM50-201ENST00000350028 GRM2Q14416 872 aa16.25■□□□□ 0.19
SAMM50-201ENST00000350028 PTGR1Q14914 329 aa16.25■□□□□ 0.19
SAMM50-201ENST00000350028 SHHQ15465 462 aa16.25■□□□□ 0.19
SAMM50-201ENST00000350028 UGT2A3Q6UWM9 527 aa16.25■□□□□ 0.19
SAMM50-201ENST00000350028 AMIGO2Q86SJ2 522 aa16.25■□□□□ 0.19
SAMM50-201ENST00000350028 ADGRG5Q8IZF4 528 aa16.25■□□□□ 0.19
SAMM50-201ENST00000350028 AADATQ8N5Z0 425 aa16.25■□□□□ 0.19
SAMM50-201ENST00000350028 TRPV3Q8NET8 790 aa16.25■□□□□ 0.19
SAMM50-201ENST00000350028 FOPNLQ96NB1 174 aa16.25■□□□□ 0.19
SAMM50-201ENST00000350028 TRIM8Q9BZR9 551 aa16.25■□□□□ 0.19
SAMM50-201ENST00000350028 LMAN2LQ9H0V9 348 aa16.25■□□□□ 0.19
SAMM50-201ENST00000350028 ATG10Q9H0Y0 220 aa16.25■□□□□ 0.19
SAMM50-201ENST00000350028 GDE1Q9NZC3 331 aa16.25■□□□□ 0.19
SAMM50-201ENST00000350028 AURKCQ9UQB9 309 aa16.25■□□□□ 0.19
SAMM50-201ENST00000350028 TCRBV5S2A0A599 114 aa16.25■□□□□ 0.19
SAMM50-201ENST00000350028 TMEM202A6NGA9 273 aa16.25■□□□□ 0.19
SAMM50-201ENST00000350028 AREL1O15033 823 aa16.25■□□□□ 0.19
SAMM50-201ENST00000350028 INPP4BO15327 924 aa16.25■□□□□ 0.19
SAMM50-201ENST00000350028 FCGR1AP12314 374 aa16.25■□□□□ 0.19
SAMM50-201ENST00000350028 ITPKAP23677 461 aa16.25■□□□□ 0.19
SAMM50-201ENST00000350028 CCR3P51677 355 aa16.25■□□□□ 0.19
SAMM50-201ENST00000350028 MESP2Q0VG99 397 aa16.25■□□□□ 0.19
SAMM50-201ENST00000350028 CHIT1Q13231 466 aa16.25■□□□□ 0.19
SAMM50-201ENST00000350028 ZNF234Q14588 700 aa16.25■□□□□ 0.19
SAMM50-201ENST00000350028 MAPKAPK3Q16644 382 aa16.25■□□□□ 0.19
SAMM50-201ENST00000350028 TMEM52BQ4KMG9 183 aa16.25■□□□□ 0.19
SAMM50-201ENST00000350028 BCL7AQ4VC05 210 aa16.25■□□□□ 0.19
SAMM50-201ENST00000350028 MTX3Q5HYI7 312 aa16.25■□□□□ 0.19
SAMM50-201ENST00000350028 FRG2Q64ET8 278 aa16.25■□□□□ 0.19
SAMM50-201ENST00000350028 SUSD1Q6UWL2 747 aa16.25■□□□□ 0.19
SAMM50-201ENST00000350028 SLC22A15Q8IZD6 547 aa16.25■□□□□ 0.19
SAMM50-201ENST00000350028 ST13P4Q8IZP2 240 aaPredicted RBP16.25■□□□□ 0.19
SAMM50-201ENST00000350028 PAPD5Q8NDF8 572 aaKnown RBP16.25■□□□□ 0.19
SAMM50-201ENST00000350028 VN1R2Q8NFZ6 395 aa16.25■□□□□ 0.19
SAMM50-201ENST00000350028 GTF2H4Q92759 462 aa16.25■□□□□ 0.19
SAMM50-201ENST00000350028 ZNF597Q96LX8 424 aa16.25■□□□□ 0.19
SAMM50-201ENST00000350028 PPM1MQ96MI6 270 aa16.25■□□□□ 0.19
SAMM50-201ENST00000350028 FRG2BQ96QU4 278 aa16.25■□□□□ 0.19
SAMM50-201ENST00000350028 FAM129BQ96TA1 746 aa16.25■□□□□ 0.19
SAMM50-201ENST00000350028 SH3GL1Q99961 368 aa16.25■□□□□ 0.19
SAMM50-201ENST00000350028 TMEM245Q9H330 911 aa16.25■□□□□ 0.19
SAMM50-201ENST00000350028 DZANK1Q9NVP4 752 aa16.25■□□□□ 0.19
SAMM50-201ENST00000350028 MAGEL2Q9UJ55 1249 aa16.25■□□□□ 0.19
SAMM50-201ENST00000350028 TRANK1O15050 2925 aa16.24■□□□□ 0.19
SAMM50-201ENST00000350028 MUC22E2RYF6 1773 aaPredicted RBP16.24■□□□□ 0.19
SAMM50-201ENST00000350028 OTOL1A6NHN0 477 aaPredicted RBP16.24■□□□□ 0.19
SAMM50-201ENST00000350028 PRAMEF4O60810 478 aa16.24■□□□□ 0.19
SAMM50-201ENST00000350028 RECQL5O94762 991 aaPredicted RBP16.24■□□□□ 0.19
SAMM50-201ENST00000350028 PGRP06401 933 aa16.24■□□□□ 0.19
SAMM50-201ENST00000350028 ADRB3P13945 408 aa16.24■□□□□ 0.19
SAMM50-201ENST00000350028 FASP25445 335 aa16.24■□□□□ 0.19
SAMM50-201ENST00000350028 IRF8Q02556 426 aa16.24■□□□□ 0.19
SAMM50-201ENST00000350028 PCDH1Q08174 1060 aa16.24■□□□□ 0.19
SAMM50-201ENST00000350028 CYP51A1Q16850 503 aa16.24■□□□□ 0.19
SAMM50-201ENST00000350028 AAK1Q2M2I8 961 aa16.24■□□□□ 0.19
SAMM50-201ENST00000350028 FAM174BQ3ZCQ3 159 aa16.24■□□□□ 0.19
SAMM50-201ENST00000350028 PRAMEF9Q5VWM5 478 aa16.24■□□□□ 0.19
SAMM50-201ENST00000350028 AGTRAPQ6RW13 159 aa16.24■□□□□ 0.19
SAMM50-201ENST00000350028 THOC6Q86W42 341 aaKnown RBP16.24■□□□□ 0.19
SAMM50-201ENST00000350028 TERB1Q8NA31 727 aa16.24■□□□□ 0.19
SAMM50-201ENST00000350028 NUS1Q96E22 293 aa16.24■□□□□ 0.19
SAMM50-201ENST00000350028 HPS4Q9NQG7 708 aa16.24■□□□□ 0.19
SAMM50-201ENST00000350028 DYRK4Q9NR20 520 aa16.24■□□□□ 0.19
SAMM50-201ENST00000350028 ANAPC2Q9UJX6 822 aa16.24■□□□□ 0.19
SAMM50-201ENST00000350028 C2orf16Q68DN1 1984 aa16.23■□□□□ 0.19
SAMM50-201ENST00000350028 LZTS3O60299 673 aaPredicted RBP16.23■□□□□ 0.19
SAMM50-201ENST00000350028 MTHFD1P11586 935 aaKnown RBP16.23■□□□□ 0.19
SAMM50-201ENST00000350028 PREPP48147 710 aa16.23■□□□□ 0.19
SAMM50-201ENST00000350028 NEK2P51955 445 aa16.23■□□□□ 0.19
SAMM50-201ENST00000350028 METAP1P53582 386 aa16.23■□□□□ 0.19
SAMM50-201ENST00000350028 PRKCQQ04759 706 aa16.23■□□□□ 0.19
SAMM50-201ENST00000350028 DPTQ07507 201 aa16.23■□□□□ 0.19
SAMM50-201ENST00000350028 CSTF3Q12996 717 aaKnown RBP16.23■□□□□ 0.19
SAMM50-201ENST00000350028 MAP7Q14244 749 aa16.23■□□□□ 0.19
SAMM50-201ENST00000350028 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.23■□□□□ 0.19
SAMM50-201ENST00000350028 SPANXN4Q5MJ08 99 aa16.23■□□□□ 0.19
SAMM50-201ENST00000350028 GLYATQ6IB77 296 aa16.23■□□□□ 0.19
SAMM50-201ENST00000350028 PPP4R4Q6NUP7 873 aa16.23■□□□□ 0.19
SAMM50-201ENST00000350028 DSG4Q86SJ6 1040 aa16.23■□□□□ 0.19
SAMM50-201ENST00000350028 PACRGLQ8N7B6 248 aa16.23■□□□□ 0.19
SAMM50-201ENST00000350028 FBXO15Q8NCQ5 510 aaPredicted RBP16.23■□□□□ 0.19
SAMM50-201ENST00000350028 NUDT8Q8WV74 236 aa16.23■□□□□ 0.19
SAMM50-201ENST00000350028 GDF15Q99988 308 aa16.23■□□□□ 0.19
SAMM50-201ENST00000350028 OSBPL11Q9BXB4 747 aa16.23■□□□□ 0.19
SAMM50-201ENST00000350028 STOX2Q9P2F5 926 aaPredicted RBP16.23■□□□□ 0.19
SAMM50-201ENST00000350028 FAM8A1Q9UBU6 413 aa16.23■□□□□ 0.19
SAMM50-201ENST00000350028 COQ6Q9Y2Z9 468 aa16.23■□□□□ 0.19
SAMM50-201ENST00000350028 ZFC3H1O60293 1989 aaKnown RBP16.23■□□□□ 0.19
SAMM50-201ENST00000350028 SOD1P00441 154 aa16.22■□□□□ 0.19
SAMM50-201ENST00000350028 C6P13671 934 aa16.22■□□□□ 0.19
SAMM50-201ENST00000350028 NCK1P16333 377 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms