RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 FBLIM1Q8WUP2 373 aa10.43□□□□□ -0.74
CAPN3-203ENST00000349748 GPRASP2Q96D09 838 aa10.43□□□□□ -0.74
CAPN3-203ENST00000349748 PHF21BQ96EK2 531 aa10.43□□□□□ -0.74
CAPN3-203ENST00000349748 GMCL1Q96IK5 515 aa10.43□□□□□ -0.74
CAPN3-203ENST00000349748 COA4Q9NYJ1 87 aa10.43□□□□□ -0.74
CAPN3-203ENST00000349748 PGAP2Q9UHJ9 254 aa10.43□□□□□ -0.74
CAPN3-203ENST00000349748 MGAT4AQ9UM21 535 aa10.43□□□□□ -0.74
CAPN3-203ENST00000349748 GINS2Q9Y248 185 aa10.43□□□□□ -0.74
CAPN3-203ENST00000349748 KCNMB2Q9Y691 235 aa10.43□□□□□ -0.74
CAPN3-203ENST00000349748 NT5C1B-RDH14C9J2C7 533 aa10.42□□□□□ -0.74
CAPN3-203ENST00000349748 ADM5C9JUS6 153 aa10.42□□□□□ -0.74
CAPN3-203ENST00000349748 KIAA0513O60268 411 aa10.42□□□□□ -0.74
CAPN3-203ENST00000349748 NPHS1O60500 1241 aa10.42□□□□□ -0.74
CAPN3-203ENST00000349748 WDR47O94967 919 aa10.42□□□□□ -0.74
CAPN3-203ENST00000349748 STAU1O95793 577 aaKnown RBP10.42□□□□□ -0.74
CAPN3-203ENST00000349748 RAF1P04049 648 aa10.42□□□□□ -0.74
CAPN3-203ENST00000349748 SOX6P35712 828 aa10.42□□□□□ -0.74
CAPN3-203ENST00000349748 TNFAIP1Q13829 316 aa10.42□□□□□ -0.74
CAPN3-203ENST00000349748 RGMBQ6NW40 437 aa10.42□□□□□ -0.74
CAPN3-203ENST00000349748 ZNF782Q6ZMW2 699 aaPredicted RBP10.42□□□□□ -0.74
CAPN3-203ENST00000349748 PIWIL4Q7Z3Z4 852 aaKnown RBP10.42□□□□□ -0.74
CAPN3-203ENST00000349748 SCUBE3Q8IX30 993 aa10.42□□□□□ -0.74
CAPN3-203ENST00000349748 MTMR14Q8NCE2 650 aa10.42□□□□□ -0.74
CAPN3-203ENST00000349748 ARRDC4Q8NCT1 418 aa10.42□□□□□ -0.74
CAPN3-203ENST00000349748 HEXDCQ8WVB3 486 aa10.42□□□□□ -0.74
CAPN3-203ENST00000349748 ZFPM2Q8WW38 1151 aa10.42□□□□□ -0.74
CAPN3-203ENST00000349748 ZBED3Q96IU2 234 aaPredicted RBP10.42□□□□□ -0.74
CAPN3-203ENST00000349748 HYLS1Q96M11 299 aa10.42□□□□□ -0.74
CAPN3-203ENST00000349748 COPS4Q9BT78 406 aa10.42□□□□□ -0.74
CAPN3-203ENST00000349748 SRRQ9GZT4 340 aa10.42□□□□□ -0.74
CAPN3-203ENST00000349748 CATSPERZQ9NTU4 200 aa10.42□□□□□ -0.74
CAPN3-203ENST00000349748 CDH9Q9ULB4 789 aa10.42□□□□□ -0.74
CAPN3-203ENST00000349748 A0A0A6YYJ9 748 aa10.42□□□□□ -0.74
CAPN3-203ENST00000349748 ASPDHA6ND91 283 aa10.42□□□□□ -0.74
CAPN3-203ENST00000349748 C2orf81A6NN90 581 aa10.42□□□□□ -0.74
CAPN3-203ENST00000349748 UBFD1O14562 309 aaKnown RBP10.42□□□□□ -0.74
CAPN3-203ENST00000349748 KHNYNO15037 678 aaKnown RBP10.42□□□□□ -0.74
CAPN3-203ENST00000349748 LSM8O95777 96 aaKnown RBP10.42□□□□□ -0.74
CAPN3-203ENST00000349748 APOC1P02654 83 aa10.42□□□□□ -0.74
CAPN3-203ENST00000349748 C2orf80Q0P641 193 aa10.42□□□□□ -0.74
CAPN3-203ENST00000349748 DSG2Q14126 1118 aa10.42□□□□□ -0.74
CAPN3-203ENST00000349748 LARS2Q15031 903 aaKnown RBP10.42□□□□□ -0.74
CAPN3-203ENST00000349748 DUSP6Q16828 381 aa10.42□□□□□ -0.74
CAPN3-203ENST00000349748 SPDYE7PQ495Y7 208 aa10.42□□□□□ -0.74
CAPN3-203ENST00000349748 SLC35F1Q5T1Q4 408 aa10.42□□□□□ -0.74
CAPN3-203ENST00000349748 PLET1Q6UQ28 207 aa10.42□□□□□ -0.74
CAPN3-203ENST00000349748 TMPRSS11AQ6ZMR5 421 aa10.42□□□□□ -0.74
CAPN3-203ENST00000349748 SLC46A3Q7Z3Q1 461 aa10.42□□□□□ -0.74
CAPN3-203ENST00000349748 LRRTM3Q86VH5 581 aa10.42□□□□□ -0.74
CAPN3-203ENST00000349748 RNF135Q8IUD6 432 aa10.42□□□□□ -0.74
CAPN3-203ENST00000349748 KCTD17Q8N5Z5 321 aa10.42□□□□□ -0.74
CAPN3-203ENST00000349748 COLGALT1Q8NBJ5 622 aa10.42□□□□□ -0.74
CAPN3-203ENST00000349748 GMCL1P1Q8NEA9 526 aa10.42□□□□□ -0.74
CAPN3-203ENST00000349748 ZNF431Q8TF32 576 aaPredicted RBP10.42□□□□□ -0.74
CAPN3-203ENST00000349748 MRGPRX2Q96LB1 330 aa10.42□□□□□ -0.74
CAPN3-203ENST00000349748 TEX37Q96LM6 180 aa10.42□□□□□ -0.74
CAPN3-203ENST00000349748 SAMD11Q96NU1 681 aa10.42□□□□□ -0.74
CAPN3-203ENST00000349748 RBM14Q96PK6 669 aaKnown RBP10.42□□□□□ -0.74
CAPN3-203ENST00000349748 BARD1Q99728 777 aaKnown RBP10.42□□□□□ -0.74
CAPN3-203ENST00000349748 GPBP1L1Q9HC44 474 aaPredicted RBP10.42□□□□□ -0.74
CAPN3-203ENST00000349748 SMURF1Q9HCE7 757 aa10.42□□□□□ -0.74
CAPN3-203ENST00000349748 CASS4Q9NQ75 786 aa10.42□□□□□ -0.74
CAPN3-203ENST00000349748 ASAH2Q9NR71 780 aa10.42□□□□□ -0.74
CAPN3-203ENST00000349748 BAIAP2Q9UQB8 552 aa10.42□□□□□ -0.74
CAPN3-203ENST00000349748 SLC22A23A1A5C7 686 aa10.41□□□□□ -0.74
CAPN3-203ENST00000349748 TEX46H3BTG2 121 aa10.41□□□□□ -0.74
CAPN3-203ENST00000349748 LGALS8O00214 317 aa10.41□□□□□ -0.74
CAPN3-203ENST00000349748 SLC16A6O15403 523 aa10.41□□□□□ -0.74
CAPN3-203ENST00000349748 CFDP00746 253 aaPredicted RBP10.41□□□□□ -0.74
CAPN3-203ENST00000349748 ASS1P00966 412 aaKnown RBP10.41□□□□□ -0.74
CAPN3-203ENST00000349748 NPPAP01160 153 aa10.41□□□□□ -0.74
CAPN3-203ENST00000349748 MAPTP10636 758 aaKnown RBP10.41□□□□□ -0.74
CAPN3-203ENST00000349748 ZP3P21754 424 aa10.41□□□□□ -0.74
CAPN3-203ENST00000349748 CPN2P22792 545 aa10.41□□□□□ -0.74
CAPN3-203ENST00000349748 MEOX2P50222 304 aa10.41□□□□□ -0.74
CAPN3-203ENST00000349748 AP1S2P56377 157 aa10.41□□□□□ -0.74
CAPN3-203ENST00000349748 ABATP80404 500 aa10.41□□□□□ -0.74
CAPN3-203ENST00000349748 FLI1Q01543 452 aaPredicted RBP10.41□□□□□ -0.74
CAPN3-203ENST00000349748 ASAH1Q13510 395 aa10.41□□□□□ -0.74
CAPN3-203ENST00000349748 CLLU1Q5K131 121 aa10.41□□□□□ -0.74
CAPN3-203ENST00000349748 ATRAIDQ6UW56 229 aa10.41□□□□□ -0.74
CAPN3-203ENST00000349748 TMEM179Q6ZVK1 233 aa10.41□□□□□ -0.74
CAPN3-203ENST00000349748 CYP4Z1Q86W10 505 aa10.41□□□□□ -0.74
CAPN3-203ENST00000349748 MAP4K3Q8IVH8 894 aa10.41□□□□□ -0.74
CAPN3-203ENST00000349748 DCP1BQ8IZD4 617 aaKnown RBP10.41□□□□□ -0.74
CAPN3-203ENST00000349748 MIER2Q8N344 545 aa10.41□□□□□ -0.74
CAPN3-203ENST00000349748 CHCHD4Q8N4Q1 142 aa10.41□□□□□ -0.74
CAPN3-203ENST00000349748 RDM1Q8NG50 284 aa10.41□□□□□ -0.74
CAPN3-203ENST00000349748 OR7G3Q8NG95 312 aa10.41□□□□□ -0.74
CAPN3-203ENST00000349748 OR5B17Q8NGF7 314 aa10.41□□□□□ -0.74
CAPN3-203ENST00000349748 OR52K1Q8NGK4 314 aa10.41□□□□□ -0.74
CAPN3-203ENST00000349748 FAM149B1Q96BN6 582 aa10.41□□□□□ -0.74
CAPN3-203ENST00000349748 MYO19Q96H55 970 aa10.41□□□□□ -0.74
CAPN3-203ENST00000349748 CNPY3Q9BT09 278 aa10.41□□□□□ -0.74
CAPN3-203ENST00000349748 TRIM54Q9BYV2 358 aa10.41□□□□□ -0.74
CAPN3-203ENST00000349748 ZNF408Q9H9D4 720 aa10.41□□□□□ -0.74
CAPN3-203ENST00000349748 KCTD5Q9NXV2 234 aa10.41□□□□□ -0.74
CAPN3-203ENST00000349748 MORF4L1Q9UBU8 362 aa10.41□□□□□ -0.74
CAPN3-203ENST00000349748 MAPRE3Q9UPY8 281 aa10.41□□□□□ -0.74
CAPN3-203ENST00000349748 MYL12BO14950 172 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms