RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 IGLV3-25P01717 112 aa17.42■□□□□ 0.38
APP-202ENST00000348990 COL6A1P12109 1028 aa17.42■□□□□ 0.38
APP-202ENST00000348990 FAM189BP81408 668 aa17.42■□□□□ 0.38
APP-202ENST00000348990 CREMQ03060 361 aa17.42■□□□□ 0.38
APP-202ENST00000348990 TWF1Q12792 350 aa17.42■□□□□ 0.38
APP-202ENST00000348990 RASAL3Q86YV0 1011 aa17.42■□□□□ 0.38
APP-202ENST00000348990 C10orf111Q8N326 155 aa17.42■□□□□ 0.38
APP-202ENST00000348990 METTL4Q8N3J2 472 aa17.42■□□□□ 0.38
APP-202ENST00000348990 SLC38A4Q969I6 547 aa17.42■□□□□ 0.38
APP-202ENST00000348990 TXNDC15Q96J42 360 aa17.42■□□□□ 0.38
APP-202ENST00000348990 KCNC2Q96PR1 638 aa17.42■□□□□ 0.38
APP-202ENST00000348990 INPP5KQ9BT40 448 aa17.42■□□□□ 0.38
APP-202ENST00000348990 REEP1Q9H902 201 aa17.42■□□□□ 0.38
APP-202ENST00000348990 THG1LQ9NWX6 298 aaKnown RBP17.42■□□□□ 0.38
APP-202ENST00000348990 EHD3Q9NZN3 535 aa17.42■□□□□ 0.38
APP-202ENST00000348990 ANKRD34BA5PLL1 514 aa17.42■□□□□ 0.38
APP-202ENST00000348990 NBNO60934 754 aa17.42■□□□□ 0.38
APP-202ENST00000348990 GRK4P32298 578 aa17.42■□□□□ 0.38
APP-202ENST00000348990 CTSKP43235 329 aa17.42■□□□□ 0.38
APP-202ENST00000348990 RPP38P78345 283 aaKnown RBP17.42■□□□□ 0.38
APP-202ENST00000348990 IFITM2Q01629 132 aa17.42■□□□□ 0.38
APP-202ENST00000348990 ARHGEF7Q14155 803 aa17.42■□□□□ 0.38
APP-202ENST00000348990 CPSF4O95639 269 aaKnown RBP17.42■□□□□ 0.38
APP-202ENST00000348990 OR2B6P58173 313 aa17.42■□□□□ 0.38
APP-202ENST00000348990 IL10RBQ08334 325 aa17.42■□□□□ 0.38
APP-202ENST00000348990 MADCAM1Q13477 382 aa17.42■□□□□ 0.38
APP-202ENST00000348990 TRIM60Q495X7 471 aa17.42■□□□□ 0.38
APP-202ENST00000348990 STX19Q8N4C7 294 aa17.42■□□□□ 0.38
APP-202ENST00000348990 ERVK13-1Q9NX77 482 aa17.42■□□□□ 0.38
APP-202ENST00000348990 ISPDA4D126 451 aa17.41■□□□□ 0.38
APP-202ENST00000348990 IFRD1O00458 451 aaPredicted RBP17.41■□□□□ 0.38
APP-202ENST00000348990 IL6P05231 212 aa17.41■□□□□ 0.38
APP-202ENST00000348990 PSEN2P49810 448 aa17.41■□□□□ 0.38
APP-202ENST00000348990 ANGPTL8Q6UXH0 198 aa17.41■□□□□ 0.38
APP-202ENST00000348990 ZNF621Q6ZSS3 439 aa17.41■□□□□ 0.38
APP-202ENST00000348990 PARP16Q8N5Y8 322 aa17.41■□□□□ 0.38
APP-202ENST00000348990 CD200R1Q8TD46 325 aa17.41■□□□□ 0.38
APP-202ENST00000348990 CCDC115Q96NT0 180 aa17.41■□□□□ 0.38
APP-202ENST00000348990 ZBED2Q9BTP6 218 aa17.41■□□□□ 0.38
APP-202ENST00000348990 BBS2Q9BXC9 721 aa17.41■□□□□ 0.38
APP-202ENST00000348990 ABHD16BQ9H3Z7 469 aa17.41■□□□□ 0.38
APP-202ENST00000348990 TRIM39Q9HCM9 518 aa17.41■□□□□ 0.38
APP-202ENST00000348990 TNPO3Q9Y5L0 923 aaKnown RBP17.41■□□□□ 0.38
APP-202ENST00000348990 A0A0G2JMZ2 1700 aa17.41■□□□□ 0.38
APP-202ENST00000348990 LRRC37A2A6NM11 1700 aa17.41■□□□□ 0.38
APP-202ENST00000348990 FFAR2O15552 330 aa17.41■□□□□ 0.38
APP-202ENST00000348990 AZGP1P25311 298 aaKnown RBP17.41■□□□□ 0.38
APP-202ENST00000348990 TTPAP49638 278 aa17.41■□□□□ 0.38
APP-202ENST00000348990 MAD2L1BPQ15013 274 aaPredicted RBP17.41■□□□□ 0.38
APP-202ENST00000348990 FXNQ16595 210 aa17.41■□□□□ 0.38
APP-202ENST00000348990 ZNF181Q2M3W8 571 aa17.41■□□□□ 0.38
APP-202ENST00000348990 AFMIDQ63HM1 303 aa17.41■□□□□ 0.38
APP-202ENST00000348990 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.41■□□□□ 0.38
APP-202ENST00000348990 GPR149Q86SP6 731 aa17.41■□□□□ 0.38
APP-202ENST00000348990 MSRB3Q8IXL7 192 aa17.41■□□□□ 0.38
APP-202ENST00000348990 TINF2Q9BSI4 451 aa17.41■□□□□ 0.38
APP-202ENST00000348990 BTBD3Q9Y2F9 522 aa17.41■□□□□ 0.38
APP-202ENST00000348990 NOTOA8MTQ0 251 aa17.4■□□□□ 0.38
APP-202ENST00000348990 UPK3BL1B0FP48 263 aa17.4■□□□□ 0.38
APP-202ENST00000348990 UPK3BL2E5RIL1 263 aa17.4■□□□□ 0.38
APP-202ENST00000348990 LOC110117498-PIK3R3F6TDL0 507 aa17.4■□□□□ 0.38
APP-202ENST00000348990 RFXANKO14593 260 aa17.4■□□□□ 0.38
APP-202ENST00000348990 LPOP22079 712 aaPredicted RBP17.4■□□□□ 0.38
APP-202ENST00000348990 RUNDC3AQ59EK9 446 aa17.4■□□□□ 0.38
APP-202ENST00000348990 RGL4Q8IZJ4 473 aa17.4■□□□□ 0.38
APP-202ENST00000348990 BCL7BQ9BQE9 202 aa17.4■□□□□ 0.38
APP-202ENST00000348990 OR51E2Q9H255 320 aa17.4■□□□□ 0.38
APP-202ENST00000348990 SNX6Q9UNH7 406 aa17.4■□□□□ 0.38
APP-202ENST00000348990 C17orf102A2RUQ5 167 aa17.4■□□□□ 0.38
APP-202ENST00000348990 CBX4O00257 560 aa17.4■□□□□ 0.38
APP-202ENST00000348990 OR7A17O14581 309 aa17.4■□□□□ 0.38
APP-202ENST00000348990 ZW10O43264 779 aa17.4■□□□□ 0.38
APP-202ENST00000348990 NTRK1P04629 796 aa17.4■□□□□ 0.38
APP-202ENST00000348990 HOXD8P13378 290 aaPredicted RBP17.4■□□□□ 0.38
APP-202ENST00000348990 BMPR1AP36894 532 aa17.4■□□□□ 0.38
APP-202ENST00000348990 SERINC3Q13530 473 aa17.4■□□□□ 0.38
APP-202ENST00000348990 PRSS36Q5K4E3 855 aa17.4■□□□□ 0.38
APP-202ENST00000348990 KIAA1614Q5VZ46 1190 aa17.4■□□□□ 0.38
APP-202ENST00000348990 SHQ1Q6PI26 577 aaKnown RBP17.4■□□□□ 0.38
APP-202ENST00000348990 MDGA1Q8NFP4 955 aa17.4■□□□□ 0.38
APP-202ENST00000348990 TSEN34Q9BSV6 310 aaKnown RBP17.4■□□□□ 0.38
APP-202ENST00000348990 NLE1Q9NVX2 485 aaPredicted RBP17.4■□□□□ 0.38
APP-202ENST00000348990 TMEM248Q9NWD8 314 aa17.4■□□□□ 0.38
APP-202ENST00000348990 MARCH2Q9P0N8 246 aa17.4■□□□□ 0.38
APP-202ENST00000348990 VPS9D1Q9Y2B5 631 aa17.4■□□□□ 0.38
APP-202ENST00000348990 WBP11Q9Y2W2 641 aaKnown RBP17.4■□□□□ 0.38
APP-202ENST00000348990 CENPFP49454 3210 aa17.4■□□□□ 0.38
APP-202ENST00000348990 CENPXA8MT69 81 aa17.4■□□□□ 0.38
APP-202ENST00000348990 SSX4O60224 188 aa17.4■□□□□ 0.38
APP-202ENST00000348990 DDNO94850 711 aaPredicted RBP17.4■□□□□ 0.38
APP-202ENST00000348990 ITGB1P05556 798 aa17.4■□□□□ 0.38
APP-202ENST00000348990 MAD2L1Q13257 205 aaPredicted RBP17.4■□□□□ 0.38
APP-202ENST00000348990 GBX1Q14549 363 aa17.4■□□□□ 0.38
APP-202ENST00000348990 TYSND1Q2T9J0 566 aa17.4■□□□□ 0.38
APP-202ENST00000348990 ZFP69Q49AA0 526 aa17.4■□□□□ 0.38
APP-202ENST00000348990 PDE12Q6L8Q7 609 aaKnown RBP17.4■□□□□ 0.38
APP-202ENST00000348990 NEK10Q6ZWH5 1172 aa17.4■□□□□ 0.38
APP-202ENST00000348990 CDK5RAP1Q96SZ6 601 aaKnown RBP17.4■□□□□ 0.38
APP-202ENST00000348990 SAMD4AQ9UPU9 718 aaKnown RBP17.4■□□□□ 0.38
APP-202ENST00000348990 NAALAD2Q9Y3Q0 740 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms