RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 OGFRQ9NZT2 677 aa18.43■□□□□ 0.54
CHMP4A-201ENST00000347519 POLG2Q9UHN1 485 aa18.43■□□□□ 0.54
CHMP4A-201ENST00000347519 FRYLO94915 3013 aa18.43■□□□□ 0.54
CHMP4A-201ENST00000347519 STX16-NPEPL1H3BU86 382 aa18.42■□□□□ 0.54
CHMP4A-201ENST00000347519 STX16O14662 325 aa18.42■□□□□ 0.54
CHMP4A-201ENST00000347519 YKT6O15498 198 aa18.42■□□□□ 0.54
CHMP4A-201ENST00000347519 GFRA3O60609 400 aa18.42■□□□□ 0.54
CHMP4A-201ENST00000347519 LMNAP02545 664 aaKnown RBP18.42■□□□□ 0.54
CHMP4A-201ENST00000347519 IMPDH1P20839 514 aa18.42■□□□□ 0.54
CHMP4A-201ENST00000347519 PKLRP30613 574 aa18.42■□□□□ 0.54
CHMP4A-201ENST00000347519 GGT5P36269 586 aa18.42■□□□□ 0.54
CHMP4A-201ENST00000347519 SLC6A12P48065 614 aa18.42■□□□□ 0.54
CHMP4A-201ENST00000347519 PNLIPRP1P54315 467 aa18.42■□□□□ 0.54
CHMP4A-201ENST00000347519 NAE1Q13564 534 aa18.42■□□□□ 0.54
CHMP4A-201ENST00000347519 C14orf28Q4W4Y0 310 aa18.42■□□□□ 0.54
CHMP4A-201ENST00000347519 FAM219BQ5XKK7 198 aa18.42■□□□□ 0.54
CHMP4A-201ENST00000347519 SLC9B2Q86UD5 537 aa18.42■□□□□ 0.54
CHMP4A-201ENST00000347519 SLC22A9Q8IVM8 553 aa18.42■□□□□ 0.54
CHMP4A-201ENST00000347519 LINC01555Q8NAE3 123 aa18.42■□□□□ 0.54
CHMP4A-201ENST00000347519 UBTD2Q8WUN7 234 aa18.42■□□□□ 0.54
CHMP4A-201ENST00000347519 L3HYPDHQ96EM0 354 aa18.42■□□□□ 0.54
CHMP4A-201ENST00000347519 NLGN3Q9NZ94 848 aa18.42■□□□□ 0.54
CHMP4A-201ENST00000347519 TMCO1Q9UM00 188 aa18.42■□□□□ 0.54
CHMP4A-201ENST00000347519 PABPN1LA6NDY0 278 aaKnown RBP18.42■□□□□ 0.54
CHMP4A-201ENST00000347519 CDX4O14627 284 aaPredicted RBP18.42■□□□□ 0.54
CHMP4A-201ENST00000347519 RPS17P08708 135 aaKnown RBP18.42■□□□□ 0.54
CHMP4A-201ENST00000347519 TSPAN8P19075 237 aa18.42■□□□□ 0.54
CHMP4A-201ENST00000347519 TGM1P22735 817 aa18.42■□□□□ 0.54
CHMP4A-201ENST00000347519 NDUFS1P28331 727 aa18.42■□□□□ 0.54
CHMP4A-201ENST00000347519 HERVK_113P63132 956 aa18.42■□□□□ 0.54
CHMP4A-201ENST00000347519 HHEXQ03014 270 aa18.42■□□□□ 0.54
CHMP4A-201ENST00000347519 PCBP2Q15366 365 aaKnown RBP eCLIP18.42■□□□□ 0.54
CHMP4A-201ENST00000347519 PDK4Q16654 411 aa18.42■□□□□ 0.54
CHMP4A-201ENST00000347519 CYP2A13Q16696 494 aa18.42■□□□□ 0.54
CHMP4A-201ENST00000347519 PTCHD3Q3KNS1 767 aa18.42■□□□□ 0.54
CHMP4A-201ENST00000347519 EID2Q8N6I1 236 aa18.42■□□□□ 0.54
CHMP4A-201ENST00000347519 CCNYL1Q8N7R7 359 aa18.42■□□□□ 0.54
CHMP4A-201ENST00000347519 OR56A3Q8NH54 315 aa18.42■□□□□ 0.54
CHMP4A-201ENST00000347519 OR4C6Q8NH72 309 aa18.42■□□□□ 0.54
CHMP4A-201ENST00000347519 DYDC1Q8WWB3 177 aa18.42■□□□□ 0.54
CHMP4A-201ENST00000347519 ZNF75CPQ92670 426 aaPredicted RBP18.42■□□□□ 0.54
CHMP4A-201ENST00000347519 CCDC126Q96EE4 140 aa18.42■□□□□ 0.54
CHMP4A-201ENST00000347519 TBC1D10AQ9BXI6 508 aa18.42■□□□□ 0.54
CHMP4A-201ENST00000347519 ERVK-6Q9BXR3 956 aa18.42■□□□□ 0.54
CHMP4A-201ENST00000347519 CD244Q9BZW8 370 aa18.42■□□□□ 0.54
CHMP4A-201ENST00000347519 GSTO2Q9H4Y5 243 aa18.42■□□□□ 0.54
CHMP4A-201ENST00000347519 SEMA4GQ9NTN9 838 aa18.42■□□□□ 0.54
CHMP4A-201ENST00000347519 SPATA7Q9P0W8 599 aa18.42■□□□□ 0.54
CHMP4A-201ENST00000347519 PCTPQ9UKL6 214 aa18.42■□□□□ 0.54
CHMP4A-201ENST00000347519 BTBD3Q9Y2F9 522 aa18.42■□□□□ 0.54
CHMP4A-201ENST00000347519 PCM1Q15154 2024 aa18.41■□□□□ 0.54
CHMP4A-201ENST00000347519 CFAP54Q96N23 3096 aa18.41■□□□□ 0.54
CHMP4A-201ENST00000347519 LY6G6EA0A0G2JKS1 128 aa18.41■□□□□ 0.54
CHMP4A-201ENST00000347519 E7ENX8 843 aa18.41■□□□□ 0.54
CHMP4A-201ENST00000347519 E2F3O00716 465 aa18.41■□□□□ 0.54
CHMP4A-201ENST00000347519 PPP6CO00743 305 aa18.41■□□□□ 0.54
CHMP4A-201ENST00000347519 SIGLEC6O43699 453 aa18.41■□□□□ 0.54
CHMP4A-201ENST00000347519 ITM2AO43736 263 aa18.41■□□□□ 0.54
CHMP4A-201ENST00000347519 PCDHGA12O60330 932 aa18.41■□□□□ 0.54
CHMP4A-201ENST00000347519 FASLGP48023 281 aa18.41■□□□□ 0.54
CHMP4A-201ENST00000347519 HNMTP50135 292 aa18.41■□□□□ 0.54
CHMP4A-201ENST00000347519 ATXN3P54252 364 aaPredicted RBP18.41■□□□□ 0.54
CHMP4A-201ENST00000347519 CDH13P55290 713 aa18.41■□□□□ 0.54
CHMP4A-201ENST00000347519 TAP2Q03519 686 aa18.41■□□□□ 0.54
CHMP4A-201ENST00000347519 SUSD1Q6UWL2 747 aa18.41■□□□□ 0.54
CHMP4A-201ENST00000347519 TMEM26Q6ZUK4 368 aa18.41■□□□□ 0.54
CHMP4A-201ENST00000347519 KLHDC8AQ8IYD2 350 aa18.41■□□□□ 0.54
CHMP4A-201ENST00000347519 SYTL1Q8IYJ3 562 aa18.41■□□□□ 0.54
CHMP4A-201ENST00000347519 TCAIMQ8N3R3 496 aa18.41■□□□□ 0.54
CHMP4A-201ENST00000347519 ARL10Q8N8L6 244 aa18.41■□□□□ 0.54
CHMP4A-201ENST00000347519 OR4E2Q8NGC2 313 aa18.41■□□□□ 0.54
CHMP4A-201ENST00000347519 ZNF483Q8TF39 744 aaPredicted RBP18.41■□□□□ 0.54
CHMP4A-201ENST00000347519 C1QTNF3Q9BXJ4 246 aa18.41■□□□□ 0.54
CHMP4A-201ENST00000347519 C20orf27Q9GZN8 174 aa18.41■□□□□ 0.54
CHMP4A-201ENST00000347519 ZBTB26Q9HCK0 441 aa18.41■□□□□ 0.54
CHMP4A-201ENST00000347519 ABCF3Q9NUQ8 709 aa18.41■□□□□ 0.54
CHMP4A-201ENST00000347519 INTS7Q9NVH2 962 aaKnown RBP18.41■□□□□ 0.54
CHMP4A-201ENST00000347519 DNAAF2Q9NVR5 837 aaKnown RBP18.41■□□□□ 0.54
CHMP4A-201ENST00000347519 NCDNQ9UBB6 729 aa18.41■□□□□ 0.54
CHMP4A-201ENST00000347519 RNF215Q9Y6U7 377 aa18.41■□□□□ 0.54
CHMP4A-201ENST00000347519 U3KQA8 63 aa18.41■□□□□ 0.54
CHMP4A-201ENST00000347519 OTOGLQ3ZCN5 2332 aa18.4■□□□□ 0.54
CHMP4A-201ENST00000347519 A0A1W2PPV9 198 aa18.4■□□□□ 0.54
CHMP4A-201ENST00000347519 CCNT2O60583 730 aaKnown RBP18.4■□□□□ 0.54
CHMP4A-201ENST00000347519 LYPLA1O75608 230 aaPredicted RBP18.4■□□□□ 0.54
CHMP4A-201ENST00000347519 STK16O75716 305 aa18.4■□□□□ 0.54
CHMP4A-201ENST00000347519 SUPT7LO94864 414 aa18.4■□□□□ 0.54
CHMP4A-201ENST00000347519 NEFHP12036 1026 aa18.4■□□□□ 0.54
CHMP4A-201ENST00000347519 EPORP19235 508 aa18.4■□□□□ 0.54
CHMP4A-201ENST00000347519 PEBP1P30086 187 aaKnown RBP18.4■□□□□ 0.54
CHMP4A-201ENST00000347519 RAB28P51157 221 aa18.4■□□□□ 0.54
CHMP4A-201ENST00000347519 BST1Q10588 318 aa18.4■□□□□ 0.54
CHMP4A-201ENST00000347519 ANKS6Q68DC2 871 aa18.4■□□□□ 0.54
CHMP4A-201ENST00000347519 RAB44Q7Z6P3 723 aaPredicted RBP18.4■□□□□ 0.54
CHMP4A-201ENST00000347519 LSMEM2Q8N112 164 aa18.4■□□□□ 0.54
CHMP4A-201ENST00000347519 OR2L8Q8NGY9 312 aa18.4■□□□□ 0.54
CHMP4A-201ENST00000347519 ZFPM2Q8WW38 1151 aa18.4■□□□□ 0.54
CHMP4A-201ENST00000347519 LCN9Q8WX39 176 aa18.4■□□□□ 0.54
CHMP4A-201ENST00000347519 ATL1Q8WXF7 558 aa18.4■□□□□ 0.54
CHMP4A-201ENST00000347519 MED8Q96G25 268 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms