RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 CCDC115Q96NT0 180 aa22.65■■□□□ 1.22
NPAS3-201ENST00000346562 RC3H2Q9HBD1 1191 aaKnown RBP22.65■■□□□ 1.22
NPAS3-201ENST00000346562 GDI2P50395 445 aaKnown RBP22.64■■□□□ 1.22
NPAS3-201ENST00000346562 SNTA1Q13424 505 aa22.64■■□□□ 1.22
NPAS3-201ENST00000346562 LRRC73Q5JTD7 316 aa22.64■■□□□ 1.22
NPAS3-201ENST00000346562 ANKRD22Q5VYY1 191 aa22.64■■□□□ 1.22
NPAS3-201ENST00000346562 EFCAB11Q9BUY7 163 aa22.64■■□□□ 1.22
NPAS3-201ENST00000346562 ADAM7Q9H2U9 754 aa22.64■■□□□ 1.22
NPAS3-201ENST00000346562 GNB5O14775 395 aa22.64■■□□□ 1.22
NPAS3-201ENST00000346562 LINGO3P0C6S8 592 aa22.64■■□□□ 1.22
NPAS3-201ENST00000346562 OR3A3P47888 321 aa22.64■■□□□ 1.22
NPAS3-201ENST00000346562 OR3A2P47893 321 aa22.64■■□□□ 1.22
NPAS3-201ENST00000346562 IDH3AP50213 366 aa22.64■■□□□ 1.22
NPAS3-201ENST00000346562 FAM174BQ3ZCQ3 159 aa22.64■■□□□ 1.22
NPAS3-201ENST00000346562 PAMR1Q6UXH9 720 aa22.64■■□□□ 1.22
NPAS3-201ENST00000346562 ZBTB46Q86UZ6 589 aa22.64■■□□□ 1.22
NPAS3-201ENST00000346562 OR5K1Q8NHB7 308 aa22.64■■□□□ 1.22
NPAS3-201ENST00000346562 ADAP2Q9NPF8 381 aa22.64■■□□□ 1.22
NPAS3-201ENST00000346562 P2RX2Q9UBL9 471 aa22.64■■□□□ 1.22
NPAS3-201ENST00000346562 RPL36Q9Y3U8 105 aaKnown RBP22.64■■□□□ 1.22
NPAS3-201ENST00000346562 INSL6Q9Y581 213 aa22.64■■□□□ 1.22
NPAS3-201ENST00000346562 CAPN8A6NHC0 703 aa22.64■■□□□ 1.21
NPAS3-201ENST00000346562 NR4A1P22736 598 aa22.64■■□□□ 1.21
NPAS3-201ENST00000346562 MAP3K8P41279 467 aa22.64■■□□□ 1.21
NPAS3-201ENST00000346562 KCNJ5P48544 419 aa22.64■■□□□ 1.21
NPAS3-201ENST00000346562 ENPP2Q13822 863 aa22.64■■□□□ 1.21
NPAS3-201ENST00000346562 C2orf27AQ580R0 203 aa22.64■■□□□ 1.21
NPAS3-201ENST00000346562 PRAMEF14Q5SWL7 426 aa22.64■■□□□ 1.21
NPAS3-201ENST00000346562 PRAMEF13Q5VWM6 474 aa22.64■■□□□ 1.21
NPAS3-201ENST00000346562 LRRTM4Q86VH4 590 aa22.64■■□□□ 1.21
NPAS3-201ENST00000346562 OR6K6Q8NGW6 343 aa22.64■■□□□ 1.21
NPAS3-201ENST00000346562 GAL3ST3Q96A11 431 aa22.64■■□□□ 1.21
NPAS3-201ENST00000346562 NODALQ96S42 347 aa22.64■■□□□ 1.21
NPAS3-201ENST00000346562 SPIN1Q9Y657 262 aaPredicted RBP22.64■■□□□ 1.21
NPAS3-201ENST00000346562 PEX12O00623 359 aa22.64■■□□□ 1.21
NPAS3-201ENST00000346562 RPLP0P05388 317 aaKnown RBP22.64■■□□□ 1.21
NPAS3-201ENST00000346562 ZNF8P17098 575 aaPredicted RBP22.64■■□□□ 1.21
NPAS3-201ENST00000346562 PRKCHP24723 683 aa22.64■■□□□ 1.21
NPAS3-201ENST00000346562 VIPR1P32241 457 aa22.64■■□□□ 1.21
NPAS3-201ENST00000346562 SPIN4Q56A73 249 aa22.64■■□□□ 1.21
NPAS3-201ENST00000346562 TNFAIP8L2Q6P589 184 aaPredicted RBP22.64■■□□□ 1.21
NPAS3-201ENST00000346562 LRRC70Q7Z2Q7 622 aa22.64■■□□□ 1.21
NPAS3-201ENST00000346562 KLHL36Q8N4N3 616 aa22.64■■□□□ 1.21
NPAS3-201ENST00000346562 KCT2Q8NC54 265 aa22.64■■□□□ 1.21
NPAS3-201ENST00000346562 SIPA1Q96FS4 1042 aa22.64■■□□□ 1.21
NPAS3-201ENST00000346562 RIOK2Q9BVS4 552 aaKnown RBP22.64■■□□□ 1.21
NPAS3-201ENST00000346562 SP140LQ9H930 580 aa22.64■■□□□ 1.21
NPAS3-201ENST00000346562 FBXO9Q9UK97 447 aaPredicted RBP22.64■■□□□ 1.21
NPAS3-201ENST00000346562 NR2E1Q9Y466 385 aa22.64■■□□□ 1.21
NPAS3-201ENST00000346562 ZNF460Q14592 562 aa22.63■■□□□ 1.21
NPAS3-201ENST00000346562 MTMR14Q8NCE2 650 aa22.63■■□□□ 1.21
NPAS3-201ENST00000346562 FCGR1BQ92637 280 aa22.63■■□□□ 1.21
NPAS3-201ENST00000346562 ITGA10O75578 1167 aa22.63■■□□□ 1.21
NPAS3-201ENST00000346562 CCNKO75909 580 aa22.63■■□□□ 1.21
NPAS3-201ENST00000346562 GALK1P51570 392 aa22.63■■□□□ 1.21
NPAS3-201ENST00000346562 SLBPQ14493 270 aaKnown RBP eCLIP22.63■■□□□ 1.21
NPAS3-201ENST00000346562 BRAT1Q6PJG6 821 aa22.63■■□□□ 1.21
NPAS3-201ENST00000346562 SLC51AQ86UW1 340 aa22.63■■□□□ 1.21
NPAS3-201ENST00000346562 CBR4Q8N4T8 237 aa22.63■■□□□ 1.21
NPAS3-201ENST00000346562 ZNF615Q8N8J6 731 aa22.63■■□□□ 1.21
NPAS3-201ENST00000346562 LPIN3Q9BQK8 851 aa22.63■■□□□ 1.21
NPAS3-201ENST00000346562 YIPF1Q9Y548 306 aa22.63■■□□□ 1.21
NPAS3-201ENST00000346562 IDNKQ5T6J7 187 aa22.63■■□□□ 1.21
NPAS3-201ENST00000346562 ADGRB1O14514 1584 aa22.63■■□□□ 1.21
NPAS3-201ENST00000346562 TMEM17Q86X19 198 aa22.63■■□□□ 1.21
NPAS3-201ENST00000346562 PLCZ1Q86YW0 608 aa22.63■■□□□ 1.21
NPAS3-201ENST00000346562 PROKR2Q8NFJ6 384 aa22.63■■□□□ 1.21
NPAS3-201ENST00000346562 TNFRSF25Q93038 417 aa22.63■■□□□ 1.21
NPAS3-201ENST00000346562 CMTM7Q96FZ5 175 aa22.63■■□□□ 1.21
NPAS3-201ENST00000346562 CNDP2Q96KP4 475 aaKnown RBP22.63■■□□□ 1.21
NPAS3-201ENST00000346562 IKZF4Q9H2S9 585 aa22.63■■□□□ 1.21
NPAS3-201ENST00000346562 TIMMDC1Q9NPL8 285 aa22.63■■□□□ 1.21
NPAS3-201ENST00000346562 SPATA7Q9P0W8 599 aa22.63■■□□□ 1.21
NPAS3-201ENST00000346562 FAM149AA5PLN7 773 aa22.63■■□□□ 1.21
NPAS3-201ENST00000346562 SAP18O00422 153 aaKnown RBP22.63■■□□□ 1.21
NPAS3-201ENST00000346562 NRP1O14786 923 aa22.63■■□□□ 1.21
NPAS3-201ENST00000346562 CLEC3AO75596 197 aa22.63■■□□□ 1.21
NPAS3-201ENST00000346562 RAP2AP10114 183 aa22.63■■□□□ 1.21
NPAS3-201ENST00000346562 NCK1P16333 377 aa22.63■■□□□ 1.21
NPAS3-201ENST00000346562 PIK3CBP42338 1070 aa22.63■■□□□ 1.21
NPAS3-201ENST00000346562 LRTOMTQ8WZ04 291 aa22.63■■□□□ 1.21
NPAS3-201ENST00000346562 FCRL5Q96RD9 977 aa22.63■■□□□ 1.21
NPAS3-201ENST00000346562 FGFBP2Q9BYJ0 223 aa22.63■■□□□ 1.21
NPAS3-201ENST00000346562 LGALS13Q9UHV8 139 aa22.63■■□□□ 1.21
NPAS3-201ENST00000346562 PDE10AQ9Y233 779 aa22.63■■□□□ 1.21
NPAS3-201ENST00000346562 SCDO00767 359 aa22.62■■□□□ 1.21
NPAS3-201ENST00000346562 SLC6A9P48067 706 aa22.62■■□□□ 1.21
NPAS3-201ENST00000346562 CRTC2Q53ET0 693 aaPredicted RBP22.62■■□□□ 1.21
NPAS3-201ENST00000346562 IQCHQ86VS3 1027 aa22.62■■□□□ 1.21
NPAS3-201ENST00000346562 SLITRK4Q8IW52 837 aa22.62■■□□□ 1.21
NPAS3-201ENST00000346562 FSTL5Q8N475 847 aaPredicted RBP22.62■■□□□ 1.21
NPAS3-201ENST00000346562 GTPBP2Q9BX10 602 aaKnown RBP22.62■■□□□ 1.21
NPAS3-201ENST00000346562 CNTN3Q9P232 1028 aa22.62■■□□□ 1.21
NPAS3-201ENST00000346562 KIDINS220Q9ULH0 1771 aa22.62■■□□□ 1.21
NPAS3-201ENST00000346562 ARVCFO00192 962 aa22.62■■□□□ 1.21
NPAS3-201ENST00000346562 NDUFS4O43181 175 aa22.62■■□□□ 1.21
NPAS3-201ENST00000346562 SDR16C5Q8N3Y7 309 aa22.62■■□□□ 1.21
NPAS3-201ENST00000346562 GRHL3Q8TE85 626 aa22.62■■□□□ 1.21
NPAS3-201ENST00000346562 SLC10A7Q0GE19 358 aa22.62■■□□□ 1.21
NPAS3-201ENST00000346562 NFATC2Q13469 925 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms