RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 FRA10AC1Q70Z53 315 aa11.47□□□□□ -0.57
SNCA-202ENST00000345009 ADAMTSL2Q86TH1 951 aa11.47□□□□□ -0.57
SNCA-202ENST00000345009 CEP97Q8IW35 865 aa11.47□□□□□ -0.57
SNCA-202ENST00000345009 AGBL5Q8NDL9 886 aa11.47□□□□□ -0.57
SNCA-202ENST00000345009 OR2L8Q8NGY9 312 aa11.47□□□□□ -0.57
SNCA-202ENST00000345009 RSC1A1Q92681 617 aa11.47□□□□□ -0.57
SNCA-202ENST00000345009 CABS1Q96KC9 395 aa11.47□□□□□ -0.57
SNCA-202ENST00000345009 DERL2Q9GZP9 239 aa11.47□□□□□ -0.57
SNCA-202ENST00000345009 XKR8Q9H6D3 395 aa11.47□□□□□ -0.57
SNCA-202ENST00000345009 CAB39LQ9H9S4 337 aa11.47□□□□□ -0.57
SNCA-202ENST00000345009 PSMC3IPQ9P2W1 217 aaPredicted RBP11.47□□□□□ -0.57
SNCA-202ENST00000345009 ANGPTL2Q9UKU9 493 aa11.47□□□□□ -0.57
SNCA-202ENST00000345009 NOVA2Q9UNW9 492 aaKnown RBP11.47□□□□□ -0.57
SNCA-202ENST00000345009 ICKQ9UPZ9 632 aa11.47□□□□□ -0.57
SNCA-202ENST00000345009 RUVBL2Q9Y230 463 aaKnown RBP11.47□□□□□ -0.57
SNCA-202ENST00000345009 MN1Q10571 1320 aaPredicted RBP11.46□□□□□ -0.57
SNCA-202ENST00000345009 CCDC187A0A096LP49 1063 aa11.46□□□□□ -0.57
SNCA-202ENST00000345009 TLCD2A6NGC4 264 aa11.46□□□□□ -0.57
SNCA-202ENST00000345009 A8MU76 341 aa11.46□□□□□ -0.57
SNCA-202ENST00000345009 ARHGEF33A8MVX0 844 aa11.46□□□□□ -0.57
SNCA-202ENST00000345009 ISM1B1AKI9 464 aa11.46□□□□□ -0.57
SNCA-202ENST00000345009 BTN3A1O00481 513 aa11.46□□□□□ -0.57
SNCA-202ENST00000345009 PHGDHO43175 533 aaKnown RBP11.46□□□□□ -0.57
SNCA-202ENST00000345009 DXOO77932 396 aaKnown RBP11.46□□□□□ -0.57
SNCA-202ENST00000345009 FKBP9O95302 570 aa11.46□□□□□ -0.57
SNCA-202ENST00000345009 TSPAN12O95859 305 aa11.46□□□□□ -0.57
SNCA-202ENST00000345009 C9P02748 559 aa11.46□□□□□ -0.57
SNCA-202ENST00000345009 CHRM5P08912 532 aaPredicted RBP11.46□□□□□ -0.57
SNCA-202ENST00000345009 LTA4HP09960 611 aaKnown RBP11.46□□□□□ -0.57
SNCA-202ENST00000345009 ANKRD34CP0C6C1 535 aa11.46□□□□□ -0.57
SNCA-202ENST00000345009 THRAP10827 490 aa11.46□□□□□ -0.57
SNCA-202ENST00000345009 CDH3P22223 829 aa11.46□□□□□ -0.57
SNCA-202ENST00000345009 PKLRP30613 574 aa11.46□□□□□ -0.57
SNCA-202ENST00000345009 CSF2RBP32927 897 aa11.46□□□□□ -0.57
SNCA-202ENST00000345009 BDKRB1P46663 353 aa11.46□□□□□ -0.57
SNCA-202ENST00000345009 BMPR2Q13873 1038 aa11.46□□□□□ -0.57
SNCA-202ENST00000345009 NAA25Q14CX7 972 aa11.46□□□□□ -0.57
SNCA-202ENST00000345009 TMTC4Q5T4D3 741 aa11.46□□□□□ -0.57
SNCA-202ENST00000345009 FBXO38Q6PIJ6 1188 aa11.46□□□□□ -0.57
SNCA-202ENST00000345009 ZNF574Q6ZN55 896 aaPredicted RBP11.46□□□□□ -0.57
SNCA-202ENST00000345009 RAB11FIP2Q7L804 512 aa11.46□□□□□ -0.57
SNCA-202ENST00000345009 PRSS42Q7Z5A4 293 aa11.46□□□□□ -0.57
SNCA-202ENST00000345009 KMT5CQ86Y97 462 aa11.46□□□□□ -0.57
SNCA-202ENST00000345009 SLITRK4Q8IW52 837 aa11.46□□□□□ -0.57
SNCA-202ENST00000345009 SYTL1Q8IYJ3 562 aa11.46□□□□□ -0.57
SNCA-202ENST00000345009 LSMEM2Q8N112 164 aa11.46□□□□□ -0.57
SNCA-202ENST00000345009 MREGQ8N565 214 aa11.46□□□□□ -0.57
SNCA-202ENST00000345009 WDR36Q8NI36 951 aaKnown RBP11.46□□□□□ -0.57
SNCA-202ENST00000345009 HMGCLL1Q8TB92 370 aa11.46□□□□□ -0.57
SNCA-202ENST00000345009 STAG3L4Q8TBR4 150 aa11.46□□□□□ -0.57
SNCA-202ENST00000345009 DCAKDQ8WVC6 231 aa11.46□□□□□ -0.57
SNCA-202ENST00000345009 JPH3Q8WXH2 748 aaPredicted RBP11.46□□□□□ -0.57
SNCA-202ENST00000345009 SMPDL3AQ92484 453 aa11.46□□□□□ -0.57
SNCA-202ENST00000345009 LIN37Q96GY3 246 aaPredicted RBP11.46□□□□□ -0.57
SNCA-202ENST00000345009 UBXN10Q96LJ8 280 aa11.46□□□□□ -0.57
SNCA-202ENST00000345009 CCDC74BQ96LY2 380 aa11.46□□□□□ -0.57
SNCA-202ENST00000345009 DHRS4Q9BTZ2 278 aa11.46□□□□□ -0.57
SNCA-202ENST00000345009 SCNM1Q9BWG6 230 aa11.46□□□□□ -0.57
SNCA-202ENST00000345009 ROPN1BQ9BZX4 212 aaPredicted RBP11.46□□□□□ -0.57
SNCA-202ENST00000345009 SEMA6CQ9H3T2 930 aa11.46□□□□□ -0.57
SNCA-202ENST00000345009 ROPN1Q9HAT0 212 aaPredicted RBP11.46□□□□□ -0.57
SNCA-202ENST00000345009 SNX15Q9NRS6 342 aa11.46□□□□□ -0.57
SNCA-202ENST00000345009 C1GALT1Q9NS00 363 aa11.46□□□□□ -0.57
SNCA-202ENST00000345009 INTS7Q9NVH2 962 aaKnown RBP11.46□□□□□ -0.57
SNCA-202ENST00000345009 ARL15Q9NXU5 204 aa11.46□□□□□ -0.57
SNCA-202ENST00000345009 UTP6Q9NYH9 597 aaKnown RBP11.46□□□□□ -0.57
SNCA-202ENST00000345009 ACTR10Q9NZ32 417 aa11.46□□□□□ -0.57
SNCA-202ENST00000345009 OGFRQ9NZT2 677 aa11.46□□□□□ -0.57
SNCA-202ENST00000345009 KLHL3Q9UH77 587 aa11.46□□□□□ -0.57
SNCA-202ENST00000345009 POMT2Q9UKY4 750 aa11.46□□□□□ -0.57
SNCA-202ENST00000345009 PLAGL1Q9UM63 463 aa11.46□□□□□ -0.57
SNCA-202ENST00000345009 MSRB2Q9Y3D2 182 aa11.46□□□□□ -0.57
SNCA-202ENST00000345009 SPEGQ15772 3267 aa11.46□□□□□ -0.58
SNCA-202ENST00000345009 A0A096LPK6 155 aa11.45□□□□□ -0.58
SNCA-202ENST00000345009 CCDC151A5D8V7 595 aa11.45□□□□□ -0.58
SNCA-202ENST00000345009 FAM149AA5PLN7 773 aa11.45□□□□□ -0.58
SNCA-202ENST00000345009 TRIM49D1C9J1S8 452 aa11.45□□□□□ -0.58
SNCA-202ENST00000345009 BTN3A3O00478 584 aa11.45□□□□□ -0.58
SNCA-202ENST00000345009 CDH16O75309 829 aa11.45□□□□□ -0.58
SNCA-202ENST00000345009 ZBTB11O95625 1053 aaPredicted RBP11.45□□□□□ -0.58
SNCA-202ENST00000345009 SLC16A8O95907 504 aa11.45□□□□□ -0.58
SNCA-202ENST00000345009 S100BP04271 92 aaPredicted RBP11.45□□□□□ -0.58
SNCA-202ENST00000345009 C2P06681 752 aa11.45□□□□□ -0.58
SNCA-202ENST00000345009 NUDT17P0C025 328 aa11.45□□□□□ -0.58
SNCA-202ENST00000345009 JMJD7P0C870 316 aa11.45□□□□□ -0.58
SNCA-202ENST00000345009 COL6A2P12110 1019 aa11.45□□□□□ -0.58
SNCA-202ENST00000345009 CCND1P24385 295 aa11.45□□□□□ -0.58
SNCA-202ENST00000345009 MPSTP25325 297 aa11.45□□□□□ -0.58
SNCA-202ENST00000345009 RBMS1P29558 406 aaKnown RBP11.45□□□□□ -0.58
SNCA-202ENST00000345009 PRDX3P30048 256 aaKnown RBP11.45□□□□□ -0.58
SNCA-202ENST00000345009 RPA3P35244 121 aaPredicted RBP11.45□□□□□ -0.58
SNCA-202ENST00000345009 HNMTP50135 292 aa11.45□□□□□ -0.58
SNCA-202ENST00000345009 KPNA2P52292 529 aaKnown RBP11.45□□□□□ -0.58
SNCA-202ENST00000345009 PNLIPRP1P54315 467 aa11.45□□□□□ -0.58
SNCA-202ENST00000345009 HSD11B2P80365 405 aa11.45□□□□□ -0.58
SNCA-202ENST00000345009 SHC2P98077 582 aa11.45□□□□□ -0.58
SNCA-202ENST00000345009 CFHR1Q03591 330 aa11.45□□□□□ -0.58
SNCA-202ENST00000345009 CSHL1Q14406 222 aa11.45□□□□□ -0.58
SNCA-202ENST00000345009 ZNF460Q14592 562 aa11.45□□□□□ -0.58
SNCA-202ENST00000345009 SF1Q15637 639 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms