RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 CD84Q9UIB8 345 aa14.06□□□□□ -0.16
CPSF7-201ENST00000340437 ZNF639Q9UID6 485 aa14.06□□□□□ -0.16
CPSF7-201ENST00000340437 SAMHD1Q9Y3Z3 626 aaKnown RBP14.06□□□□□ -0.16
CPSF7-201ENST00000340437 LOC100506127A0A0U1RQW1 187 aa14.06□□□□□ -0.16
CPSF7-201ENST00000340437 C2orf78A6NCI8 922 aa14.06□□□□□ -0.16
CPSF7-201ENST00000340437 ANKRD28O15084 1053 aa14.06□□□□□ -0.16
CPSF7-201ENST00000340437 SERPINB7O75635 380 aa14.06□□□□□ -0.16
CPSF7-201ENST00000340437 PDYNP01213 254 aa14.06□□□□□ -0.16
CPSF7-201ENST00000340437 MT-ND2P03891 347 aa14.06□□□□□ -0.16
CPSF7-201ENST00000340437 GRSF1Q12849 480 aaKnown RBP eCLIP14.06□□□□□ -0.16
CPSF7-201ENST00000340437 SLC13A2Q13183 592 aa14.06□□□□□ -0.16
CPSF7-201ENST00000340437 CDH18Q13634 790 aa14.06□□□□□ -0.16
CPSF7-201ENST00000340437 CYP27C1Q4G0S4 372 aa14.06□□□□□ -0.16
CPSF7-201ENST00000340437 GTF2IRD2BQ6EKJ0 949 aa14.06□□□□□ -0.16
CPSF7-201ENST00000340437 TPGS1Q6ZTW0 290 aa14.06□□□□□ -0.16
CPSF7-201ENST00000340437 GTF2IRD2Q86UP8 949 aa14.06□□□□□ -0.16
CPSF7-201ENST00000340437 CYP4Z1Q86W10 505 aa14.06□□□□□ -0.16
CPSF7-201ENST00000340437 OR52J3Q8NH60 311 aa14.06□□□□□ -0.16
CPSF7-201ENST00000340437 ZFYVE1Q9HBF4 777 aa14.06□□□□□ -0.16
CPSF7-201ENST00000340437 C1orf109Q9NX04 203 aa14.06□□□□□ -0.16
CPSF7-201ENST00000340437 SCN3BQ9NY72 215 aa14.06□□□□□ -0.16
CPSF7-201ENST00000340437 MANBAO00462 879 aa14.06□□□□□ -0.16
CPSF7-201ENST00000340437 LCKP06239 509 aa14.06□□□□□ -0.16
CPSF7-201ENST00000340437 HSMCR30P0CW71 290 aa14.06□□□□□ -0.16
CPSF7-201ENST00000340437 DBTP11182 482 aaKnown RBP14.06□□□□□ -0.16
CPSF7-201ENST00000340437 ISL1P61371 349 aa14.06□□□□□ -0.16
CPSF7-201ENST00000340437 RPS14P62263 151 aaKnown RBP14.06□□□□□ -0.16
CPSF7-201ENST00000340437 SLC14A1Q13336 389 aa14.06□□□□□ -0.16
CPSF7-201ENST00000340437 ZNF846Q147U1 533 aa14.06□□□□□ -0.16
CPSF7-201ENST00000340437 CHRNA6Q15825 494 aa14.06□□□□□ -0.16
CPSF7-201ENST00000340437 ADPRMQ3LIE5 342 aa14.06□□□□□ -0.16
CPSF7-201ENST00000340437 PDE12Q6L8Q7 609 aaKnown RBP14.06□□□□□ -0.16
CPSF7-201ENST00000340437 GPR153Q6NV75 609 aa14.06□□□□□ -0.16
CPSF7-201ENST00000340437 PEX13Q92968 403 aa14.06□□□□□ -0.16
CPSF7-201ENST00000340437 ABHD8Q96I13 439 aa14.06□□□□□ -0.16
CPSF7-201ENST00000340437 TSC22D4Q9Y3Q8 395 aa14.06□□□□□ -0.16
CPSF7-201ENST00000340437 SMAD6O43541 496 aaKnown RBP14.05□□□□□ -0.16
CPSF7-201ENST00000340437 CLDN11O75508 207 aa14.05□□□□□ -0.16
CPSF7-201ENST00000340437 STK16O75716 305 aa14.05□□□□□ -0.16
CPSF7-201ENST00000340437 SEC24AO95486 1093 aa14.05□□□□□ -0.16
CPSF7-201ENST00000340437 ATF6P18850 670 aa14.05□□□□□ -0.16
CPSF7-201ENST00000340437 HOXC8P31273 242 aa14.05□□□□□ -0.16
CPSF7-201ENST00000340437 PPP2R2BQ00005 443 aa14.05□□□□□ -0.16
CPSF7-201ENST00000340437 TSPAN33Q86UF1 283 aa14.05□□□□□ -0.16
CPSF7-201ENST00000340437 TMEM132CQ8N3T6 1108 aa14.05□□□□□ -0.16
CPSF7-201ENST00000340437 OR8J3Q8NGG0 315 aa14.05□□□□□ -0.16
CPSF7-201ENST00000340437 REXO5Q96IC2 774 aaKnown RBP14.05□□□□□ -0.16
CPSF7-201ENST00000340437 PANX1Q96RD7 426 aa14.05□□□□□ -0.16
CPSF7-201ENST00000340437 RNF38Q9H0F5 515 aa14.05□□□□□ -0.16
CPSF7-201ENST00000340437 CPQQ9Y646 472 aa14.05□□□□□ -0.16
CPSF7-201ENST00000340437 TRIM64A6NGJ6 449 aa14.05□□□□□ -0.16
CPSF7-201ENST00000340437 EVPLLA8MZ36 301 aa14.05□□□□□ -0.16
CPSF7-201ENST00000340437 IFRD1O00458 451 aaPredicted RBP14.05□□□□□ -0.16
CPSF7-201ENST00000340437 RECQL5O94762 991 aaPredicted RBP14.05□□□□□ -0.16
CPSF7-201ENST00000340437 ITGALP20701 1170 aa14.05□□□□□ -0.16
CPSF7-201ENST00000340437 DGKAP23743 735 aa14.05□□□□□ -0.16
CPSF7-201ENST00000340437 NUDT6P53370 316 aa14.05□□□□□ -0.16
CPSF7-201ENST00000340437 HECTD3Q5T447 861 aa14.05□□□□□ -0.16
CPSF7-201ENST00000340437 LAIR2Q6ISS4 152 aa14.05□□□□□ -0.16
CPSF7-201ENST00000340437 SLC16A12Q6ZSM3 486 aa14.05□□□□□ -0.16
CPSF7-201ENST00000340437 RFLNAQ6ZTI6 216 aa14.05□□□□□ -0.16
CPSF7-201ENST00000340437 HS6ST3Q8IZP7 471 aa14.05□□□□□ -0.16
CPSF7-201ENST00000340437 CHPT1Q8WUD6 406 aa14.05□□□□□ -0.16
CPSF7-201ENST00000340437 SH3GL1Q99961 368 aa14.05□□□□□ -0.16
CPSF7-201ENST00000340437 CD244Q9BZW8 370 aa14.05□□□□□ -0.16
CPSF7-201ENST00000340437 IL17CQ9P0M4 197 aa14.05□□□□□ -0.16
CPSF7-201ENST00000340437 VPS51Q9UID3 782 aa14.05□□□□□ -0.16
CPSF7-201ENST00000340437 ARNTLO00327 626 aa14.05□□□□□ -0.16
CPSF7-201ENST00000340437 KLK8O60259 260 aa14.05□□□□□ -0.16
CPSF7-201ENST00000340437 WDR47O94967 919 aa14.05□□□□□ -0.16
CPSF7-201ENST00000340437 SCELO95171 688 aa14.05□□□□□ -0.16
CPSF7-201ENST00000340437 VIPP01282 170 aa14.05□□□□□ -0.16
CPSF7-201ENST00000340437 RPIAP49247 311 aa14.05□□□□□ -0.16
CPSF7-201ENST00000340437 NCCRP1Q6ZVX7 275 aaPredicted RBP14.05□□□□□ -0.16
CPSF7-201ENST00000340437 P2RY8Q86VZ1 359 aa14.05□□□□□ -0.16
CPSF7-201ENST00000340437 TTC30BQ8N4P2 665 aa14.05□□□□□ -0.16
CPSF7-201ENST00000340437 ZBTB2Q8N680 514 aa14.05□□□□□ -0.16
CPSF7-201ENST00000340437 RHBDF1Q96CC6 855 aa14.05□□□□□ -0.16
CPSF7-201ENST00000340437 PYURFQ96I23 114 aa14.05□□□□□ -0.16
CPSF7-201ENST00000340437 ZNF347Q96SE7 839 aa14.05□□□□□ -0.16
CPSF7-201ENST00000340437 MTERF1Q99551 399 aaKnown RBP14.05□□□□□ -0.16
CPSF7-201ENST00000340437 MYO16Q9Y6X6 1858 aa14.04□□□□□ -0.16
CPSF7-201ENST00000340437 PQBP1O60828 265 aaKnown RBP14.04□□□□□ -0.16
CPSF7-201ENST00000340437 SULT1C4O75897 302 aa14.04□□□□□ -0.16
CPSF7-201ENST00000340437 TNFRSF1BP20333 461 aa14.04□□□□□ -0.16
CPSF7-201ENST00000340437 SFSWAPQ12872 951 aaKnown RBP14.04□□□□□ -0.16
CPSF7-201ENST00000340437 RUNDC3AQ59EK9 446 aa14.04□□□□□ -0.16
CPSF7-201ENST00000340437 NIPAL1Q6NVV3 410 aa14.04□□□□□ -0.16
CPSF7-201ENST00000340437 FUT10Q6P4F1 479 aa14.04□□□□□ -0.16
CPSF7-201ENST00000340437 TTC29Q8NA56 475 aaPredicted RBP14.04□□□□□ -0.16
CPSF7-201ENST00000340437 ALPK1Q96QP1 1244 aa14.04□□□□□ -0.16
CPSF7-201ENST00000340437 ASPSCR1Q9BZE9 553 aa14.04□□□□□ -0.16
CPSF7-201ENST00000340437 DCAF13Q9NV06 445 aaKnown RBP14.04□□□□□ -0.16
CPSF7-201ENST00000340437 ENPP5Q9UJA9 477 aa14.04□□□□□ -0.16
CPSF7-201ENST00000340437 M0R129 80 aa14.04□□□□□ -0.16
CPSF7-201ENST00000340437 SLC28A1O00337 649 aa14.04□□□□□ -0.16
CPSF7-201ENST00000340437 PGLSO95336 258 aa14.04□□□□□ -0.16
CPSF7-201ENST00000340437 IL6P05231 212 aa14.04□□□□□ -0.16
CPSF7-201ENST00000340437 PRKAR2AP13861 404 aaKnown RBP14.04□□□□□ -0.16
CPSF7-201ENST00000340437 WEE1P30291 646 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms