RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 DNAJC9Q8WXX5 260 aa7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 APIPQ96GX9 242 aa7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 PPM1MQ96MI6 270 aa7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 IL17FQ96PD4 163 aa7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 SERPINI1Q99574 410 aa7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 CDCA3Q99618 268 aaPredicted RBP7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 SLC6A13Q9NSD5 602 aa7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 NDE1Q9NXR1 346 aa7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 OBP2AQ9NY56 170 aa7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 STOX2Q9P2F5 926 aaPredicted RBP7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 KLHL42Q9P2K6 505 aa7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 TMCO1Q9UM00 188 aa7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 ZFR2Q9UPR6 939 aaKnown RBP7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 KCNE1BA0A087WTH5 132 aa7.19□□□□□ -1.26
SRFBP1-201ENST00000339397 CCDC154A6NI56 674 aa7.19□□□□□ -1.26
SRFBP1-201ENST00000339397 H3BM21 787 aa7.19□□□□□ -1.26
SRFBP1-201ENST00000339397 TRIM38O00635 465 aa7.19□□□□□ -1.26
SRFBP1-201ENST00000339397 ADAM23O75077 832 aa7.19□□□□□ -1.26
SRFBP1-201ENST00000339397 VPS4BO75351 444 aa7.19□□□□□ -1.26
SRFBP1-201ENST00000339397 AP2A2O94973 939 aa7.19□□□□□ -1.26
SRFBP1-201ENST00000339397 LRATO95237 230 aa7.19□□□□□ -1.26
SRFBP1-201ENST00000339397 MTHFD1P11586 935 aaKnown RBP7.19□□□□□ -1.26
SRFBP1-201ENST00000339397 NCK1P16333 377 aa7.19□□□□□ -1.26
SRFBP1-201ENST00000339397 VARSP26640 1264 aaKnown RBP7.19□□□□□ -1.26
SRFBP1-201ENST00000339397 GCKP35557 465 aa7.19□□□□□ -1.26
SRFBP1-201ENST00000339397 NUBP1P53384 320 aa7.19□□□□□ -1.26
SRFBP1-201ENST00000339397 KCNK10P57789 538 aa7.19□□□□□ -1.26
SRFBP1-201ENST00000339397 EMX2Q04743 252 aa7.19□□□□□ -1.26
SRFBP1-201ENST00000339397 ELP6Q0PNE2 266 aa7.19□□□□□ -1.26
SRFBP1-201ENST00000339397 MAPRE2Q15555 327 aa7.19□□□□□ -1.26
SRFBP1-201ENST00000339397 RAB30Q15771 203 aa7.19□□□□□ -1.26
SRFBP1-201ENST00000339397 TMEM196Q5HYL7 178 aa7.19□□□□□ -1.26
SRFBP1-201ENST00000339397 IZUMO2Q6UXV1 221 aa7.19□□□□□ -1.26
SRFBP1-201ENST00000339397 CYP2U1Q7Z449 544 aa7.19□□□□□ -1.26
SRFBP1-201ENST00000339397 TRMT11Q7Z4G4 463 aaKnown RBP7.19□□□□□ -1.26
SRFBP1-201ENST00000339397 NRSN1Q8IZ57 195 aa7.19□□□□□ -1.26
SRFBP1-201ENST00000339397 CXorf40AQ8TE69 158 aa7.19□□□□□ -1.26
SRFBP1-201ENST00000339397 UCMAQ8WVF2 138 aa7.19□□□□□ -1.26
SRFBP1-201ENST00000339397 USP7Q93009 1102 aa7.19□□□□□ -1.26
SRFBP1-201ENST00000339397 SLCO4A1Q96BD0 722 aa7.19□□□□□ -1.26
SRFBP1-201ENST00000339397 ELSPBP1Q96BH3 223 aa7.19□□□□□ -1.26
SRFBP1-201ENST00000339397 TRIM54Q9BYV2 358 aa7.19□□□□□ -1.26
SRFBP1-201ENST00000339397 SEMA6AQ9H2E6 1030 aa7.19□□□□□ -1.26
SRFBP1-201ENST00000339397 ZNF576Q9H609 170 aa7.19□□□□□ -1.26
SRFBP1-201ENST00000339397 TRIM39Q9HCM9 518 aa7.19□□□□□ -1.26
SRFBP1-201ENST00000339397 HEBP1Q9NRV9 189 aa7.19□□□□□ -1.26
SRFBP1-201ENST00000339397 RIC8BQ9NVN3 520 aa7.19□□□□□ -1.26
SRFBP1-201ENST00000339397 NFKBIL1Q9UBC1 381 aaPredicted RBP7.19□□□□□ -1.26
SRFBP1-201ENST00000339397 MCM8Q9UJA3 840 aa7.19□□□□□ -1.26
SRFBP1-201ENST00000339397 PSMD11O00231 422 aa7.19□□□□□ -1.26
SRFBP1-201ENST00000339397 FKBP6O75344 327 aa7.19□□□□□ -1.26
SRFBP1-201ENST00000339397 C1orf105O95561 183 aa7.19□□□□□ -1.26
SRFBP1-201ENST00000339397 ETHE1O95571 254 aa7.19□□□□□ -1.26
SRFBP1-201ENST00000339397 EGFP01133 1207 aa7.19□□□□□ -1.26
SRFBP1-201ENST00000339397 APODP05090 189 aa7.19□□□□□ -1.26
SRFBP1-201ENST00000339397 GSTM1P09488 218 aa7.19□□□□□ -1.26
SRFBP1-201ENST00000339397 MPC1LP0DKB6 136 aa7.19□□□□□ -1.26
SRFBP1-201ENST00000339397 COL9A1P20849 921 aa7.19□□□□□ -1.26
SRFBP1-201ENST00000339397 CYP2A7P20853 494 aa7.19□□□□□ -1.26
SRFBP1-201ENST00000339397 ATP6V1B2P21281 511 aa7.19□□□□□ -1.26
SRFBP1-201ENST00000339397 MAP4P27816 1152 aaKnown RBP7.19□□□□□ -1.26
SRFBP1-201ENST00000339397 GNPDA1P46926 289 aa7.19□□□□□ -1.26
SRFBP1-201ENST00000339397 MTPNP58546 118 aa7.19□□□□□ -1.26
SRFBP1-201ENST00000339397 GSTM4Q03013 218 aa7.19□□□□□ -1.26
SRFBP1-201ENST00000339397 NFYCQ13952 458 aa7.19□□□□□ -1.26
SRFBP1-201ENST00000339397 ADGRE1Q14246 886 aa7.19□□□□□ -1.26
SRFBP1-201ENST00000339397 FAM174BQ3ZCQ3 159 aa7.19□□□□□ -1.26
SRFBP1-201ENST00000339397 SPANXN4Q5MJ08 99 aa7.19□□□□□ -1.26
SRFBP1-201ENST00000339397 CATSPEREQ5SY80 951 aa7.19□□□□□ -1.26
SRFBP1-201ENST00000339397 PNCKQ6P2M8 343 aa7.19□□□□□ -1.26
SRFBP1-201ENST00000339397 ISLR2Q6UXK2 745 aa7.19□□□□□ -1.26
SRFBP1-201ENST00000339397 DLEU7Q6UYE1 221 aa7.19□□□□□ -1.26
SRFBP1-201ENST00000339397 DNAJC14Q6Y2X3 702 aaPredicted RBP7.19□□□□□ -1.26
SRFBP1-201ENST00000339397 TRIM46Q7Z4K8 759 aa7.19□□□□□ -1.26
SRFBP1-201ENST00000339397 FAM124AQ86V42 546 aa7.19□□□□□ -1.26
SRFBP1-201ENST00000339397 THOC6Q86W42 341 aaKnown RBP7.19□□□□□ -1.26
SRFBP1-201ENST00000339397 SPPL2CQ8IUH8 684 aa7.19□□□□□ -1.26
SRFBP1-201ENST00000339397 ZNF480Q8WV37 535 aa7.19□□□□□ -1.26
SRFBP1-201ENST00000339397 PPP1R16AQ96I34 528 aa7.19□□□□□ -1.26
SRFBP1-201ENST00000339397 TSSK3Q96PN8 268 aa7.19□□□□□ -1.26
SRFBP1-201ENST00000339397 PKP2Q99959 881 aa7.19□□□□□ -1.26
SRFBP1-201ENST00000339397 EBPLQ9BY08 206 aa7.19□□□□□ -1.26
SRFBP1-201ENST00000339397 MRPL40Q9NQ50 206 aaKnown RBP7.19□□□□□ -1.26
SRFBP1-201ENST00000339397 PLEKHM1Q9Y4G2 1056 aa7.19□□□□□ -1.26
SRFBP1-201ENST00000339397 NEUROG3Q9Y4Z2 214 aa7.19□□□□□ -1.26
SRFBP1-201ENST00000339397 PCDHA9Q9Y5H5 950 aa7.19□□□□□ -1.26
SRFBP1-201ENST00000339397 PRAMEF33A0A0G2JMD5 474 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 ARHGAP10A1A4S6 786 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 BCKDHAP12694 445 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 EFNA1P20827 205 aaPredicted RBP7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 NFKBIAP25963 317 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 GRIA3P42263 894 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 AQP4P55087 323 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 DPTQ07507 201 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 CDC16Q13042 620 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 DOC2AQ14183 400 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 PON2Q15165 354 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 TRIP10Q15642 601 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 IMPG1Q17R60 797 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 GTDC1Q4AE62 458 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 360.1 ms