RNA–Protein interactions for RNA: ENST00000335972.10

UBA1-201, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-201ENST00000335972 VOPP1Q96AW1 172 aa14.48□□□□□ -0.09
UBA1-201ENST00000335972 HTATIP2Q9BUP3 242 aa14.48□□□□□ -0.09
UBA1-201ENST00000335972 AMBRA1Q9C0C7 1298 aa14.48□□□□□ -0.09
UBA1-201ENST00000335972 STOML2Q9UJZ1 356 aa14.48□□□□□ -0.09
UBA1-201ENST00000335972 CPSF4O95639 269 aaKnown RBP14.47□□□□□ -0.09
UBA1-201ENST00000335972 ALPLP05186 524 aa14.47□□□□□ -0.09
UBA1-201ENST00000335972 MATN1P21941 496 aa14.47□□□□□ -0.09
UBA1-201ENST00000335972 RPS3P23396 243 aaKnown RBP eCLIP14.47□□□□□ -0.099e-7■■■■□ 22.5
UBA1-201ENST00000335972 S100A3P33764 101 aa14.47□□□□□ -0.09
UBA1-201ENST00000335972 TUBA4AP68366 448 aa14.47□□□□□ -0.09
UBA1-201ENST00000335972 ILF2Q12905 390 aaKnown RBP14.47□□□□□ -0.09
UBA1-201ENST00000335972 CES5AQ6NT32 575 aa14.47□□□□□ -0.09
UBA1-201ENST00000335972 DOK6Q6PKX4 331 aa14.47□□□□□ -0.09
UBA1-201ENST00000335972 MACC1Q6ZN28 852 aa14.47□□□□□ -0.09
UBA1-201ENST00000335972 ERI1Q8IV48 349 aaKnown RBP14.47□□□□□ -0.09
UBA1-201ENST00000335972 VWCEQ96DN2 955 aa14.47□□□□□ -0.09
UBA1-201ENST00000335972 CCDC90BQ9GZT6 254 aa14.47□□□□□ -0.09
UBA1-201ENST00000335972 KIAA1522Q9P206 1035 aaPredicted RBP14.47□□□□□ -0.09
UBA1-201ENST00000335972 PCDHGA8Q9Y5G5 932 aa14.47□□□□□ -0.09
UBA1-201ENST00000335972 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.47□□□□□ -0.09
UBA1-201ENST00000335972 SLC28A1O00337 649 aa14.47□□□□□ -0.09
UBA1-201ENST00000335972 C1SP09871 688 aa14.47□□□□□ -0.09
UBA1-201ENST00000335972 NSG1P42857 185 aa14.47□□□□□ -0.09
UBA1-201ENST00000335972 PREPP48147 710 aa14.47□□□□□ -0.09
UBA1-201ENST00000335972 ALDH3A2P51648 485 aa14.47□□□□□ -0.09
UBA1-201ENST00000335972 BNIP3Q12983 259 aa14.47□□□□□ -0.09
UBA1-201ENST00000335972 Q6ZVL8 140 aa14.47□□□□□ -0.09
UBA1-201ENST00000335972 R3HCC1LQ7Z5L2 792 aaKnown RBP14.47□□□□□ -0.09
UBA1-201ENST00000335972 GPR180Q86V85 440 aa14.47□□□□□ -0.09
UBA1-201ENST00000335972 VNN3Q9NY84 501 aa14.47□□□□□ -0.09
UBA1-201ENST00000335972 TMCO1Q9UM00 188 aa14.47□□□□□ -0.09
UBA1-201ENST00000335972 TRBV5-4A0A0C4DH59 114 aa14.47□□□□□ -0.09
UBA1-201ENST00000335972 MYO1GB0I1T2 1018 aa14.47□□□□□ -0.09
UBA1-201ENST00000335972 H3BMQ9 156 aa14.47□□□□□ -0.09
UBA1-201ENST00000335972 hCG_2039718K7EN88 272 aa14.47□□□□□ -0.09
UBA1-201ENST00000335972 TTLL9Q3SXZ7 439 aa14.47□□□□□ -0.09
UBA1-201ENST00000335972 C22orf39Q6P5X5 142 aa14.47□□□□□ -0.09
UBA1-201ENST00000335972 ZNF783Q6ZMS7 281 aa14.47□□□□□ -0.09
UBA1-201ENST00000335972 NECAB2Q7Z6G3 386 aa14.47□□□□□ -0.09
UBA1-201ENST00000335972 RBM23Q86U06 439 aaKnown RBP14.47□□□□□ -0.09
UBA1-201ENST00000335972 MED8Q96G25 268 aa14.47□□□□□ -0.09
UBA1-201ENST00000335972 COG8Q96MW5 612 aa14.47□□□□□ -0.09
UBA1-201ENST00000335972 CLMPQ9H6B4 373 aa14.47□□□□□ -0.09
UBA1-201ENST00000335972 KCTD5Q9NXV2 234 aa14.47□□□□□ -0.09
UBA1-201ENST00000335972 FAF1Q9UNN5 650 aaPredicted RBP14.47□□□□□ -0.09
UBA1-201ENST00000335972 CREG1O75629 220 aa14.46□□□□□ -0.09
UBA1-201ENST00000335972 EBLN1P0CF75 366 aa14.46□□□□□ -0.09
UBA1-201ENST00000335972 FSHRP23945 695 aa14.46□□□□□ -0.09
UBA1-201ENST00000335972 ETV3P41162 512 aa14.46□□□□□ -0.09
UBA1-201ENST00000335972 GSSP48637 474 aa14.46□□□□□ -0.09
UBA1-201ENST00000335972 KCNAB2Q13303 367 aa14.46□□□□□ -0.09
UBA1-201ENST00000335972 LDLRAP1Q5SW96 308 aa14.46□□□□□ -0.09
UBA1-201ENST00000335972 TPRG1Q6ZUI0 275 aa14.46□□□□□ -0.09
UBA1-201ENST00000335972 ELMO1Q92556 727 aa14.46□□□□□ -0.09
UBA1-201ENST00000335972 ACDQ96AP0 544 aa14.46□□□□□ -0.09
UBA1-201ENST00000335972 SDCCAG3Q96C92 435 aa14.46□□□□□ -0.09
UBA1-201ENST00000335972 MUC13Q9H3R2 512 aa14.46□□□□□ -0.09
UBA1-201ENST00000335972 PCDH12Q9NPG4 1184 aa14.46□□□□□ -0.09
UBA1-201ENST00000335972 ZDHHC3Q9NYG2 299 aa14.46□□□□□ -0.09
UBA1-201ENST00000335972 HCFC2Q9Y5Z7 792 aa14.46□□□□□ -0.09
UBA1-201ENST00000335972 XIRP2A4UGR9 3374 aa14.46□□□□□ -0.09
UBA1-201ENST00000335972 GFRA2O00451 464 aa14.46□□□□□ -0.09
UBA1-201ENST00000335972 RFPL2O75678 378 aa14.46□□□□□ -0.09
UBA1-201ENST00000335972 PRSS23O95084 383 aa14.46□□□□□ -0.09
UBA1-201ENST00000335972 KRT6AP02538 564 aa14.46□□□□□ -0.09
UBA1-201ENST00000335972 KRT6BP04259 564 aa14.46□□□□□ -0.09
UBA1-201ENST00000335972 ZNF182P17025 639 aaPredicted RBP14.46□□□□□ -0.09
UBA1-201ENST00000335972 SDC1P18827 310 aa14.46□□□□□ -0.09
UBA1-201ENST00000335972 AQP1P29972 269 aa14.46□□□□□ -0.09
UBA1-201ENST00000335972 KRT6CP48668 564 aa14.46□□□□□ -0.09
UBA1-201ENST00000335972 CTU2Q2VPK5 515 aaKnown RBP14.46□□□□□ -0.09
UBA1-201ENST00000335972 RUNDC3AQ59EK9 446 aa14.46□□□□□ -0.09
UBA1-201ENST00000335972 OTOP2Q7RTS6 562 aa14.46□□□□□ -0.09
UBA1-201ENST00000335972 MICU2Q8IYU8 434 aa14.46□□□□□ -0.09
UBA1-201ENST00000335972 PAIP1Q9H074 479 aaKnown RBP14.46□□□□□ -0.09
UBA1-201ENST00000335972 SLC32A1Q9H598 525 aa14.46□□□□□ -0.09
UBA1-201ENST00000335972 GPBP1L1Q9HC44 474 aaPredicted RBP14.46□□□□□ -0.09
UBA1-201ENST00000335972 LRG1P02750 347 aa14.45□□□□□ -0.1
UBA1-201ENST00000335972 HIST1H2AGP0C0S8 130 aaPredicted RBP14.45□□□□□ -0.1
UBA1-201ENST00000335972 HIST1H2ADP20671 130 aa14.45□□□□□ -0.1
UBA1-201ENST00000335972 EMP3P54852 163 aa14.45□□□□□ -0.1
UBA1-201ENST00000335972 SNRPD1P62314 119 aaKnown RBP14.45□□□□□ -0.1
UBA1-201ENST00000335972 CHIT1Q13231 466 aa14.45□□□□□ -0.1
UBA1-201ENST00000335972 SIM2Q14190 667 aaPredicted RBP14.45□□□□□ -0.1
UBA1-201ENST00000335972 CCNYL2Q5T2Q4 361 aa14.45□□□□□ -0.1
UBA1-201ENST00000335972 IRAK1BP1Q5VVH5 260 aa14.45□□□□□ -0.1
UBA1-201ENST00000335972 HSD11B1LQ7Z5J1 315 aa14.45□□□□□ -0.1
UBA1-201ENST00000335972 VTCN1Q7Z7D3 282 aa14.45□□□□□ -0.1
UBA1-201ENST00000335972 TCEAL8Q8IYN2 117 aa14.45□□□□□ -0.1
UBA1-201ENST00000335972 CLECL1Q8IZS7 167 aa14.45□□□□□ -0.1
UBA1-201ENST00000335972 SLAIN1Q8ND83 568 aa14.45□□□□□ -0.1
UBA1-201ENST00000335972 OR8J3Q8NGG0 315 aa14.45□□□□□ -0.1
UBA1-201ENST00000335972 SCRN2Q96FV2 425 aa14.45□□□□□ -0.1
UBA1-201ENST00000335972 HIST1H2AHQ96KK5 128 aa14.45□□□□□ -0.1
UBA1-201ENST00000335972 MBOAT4Q96T53 435 aa14.45□□□□□ -0.1
UBA1-201ENST00000335972 HIST1H2AJQ99878 128 aa14.45□□□□□ -0.1
UBA1-201ENST00000335972 H2AFJQ9BTM1 129 aa14.45□□□□□ -0.1
UBA1-201ENST00000335972 GALNT8Q9NY28 637 aa14.45□□□□□ -0.1
UBA1-201ENST00000335972 SPG21Q9NZD8 308 aa14.45□□□□□ -0.1
UBA1-201ENST00000335972 FBXO10Q9UK96 956 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms