RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 STK40Q8N2I9 435 aa16.16■□□□□ 0.18
CDC42EP4-201ENST00000335793 PNPT1Q8TCS8 783 aaKnown RBP16.16■□□□□ 0.18
CDC42EP4-201ENST00000335793 BPIFB1Q8TDL5 484 aa16.16■□□□□ 0.18
CDC42EP4-201ENST00000335793 TRUB1Q8WWH5 349 aaKnown RBP16.16■□□□□ 0.18
CDC42EP4-201ENST00000335793 GLMNQ92990 594 aa16.16■□□□□ 0.18
CDC42EP4-201ENST00000335793 LRTM1Q9HBL6 345 aa16.16■□□□□ 0.18
CDC42EP4-201ENST00000335793 NEK6Q9HC98 313 aa16.16■□□□□ 0.18
CDC42EP4-201ENST00000335793 PSME2Q9UL46 239 aa16.16■□□□□ 0.18
CDC42EP4-201ENST00000335793 OR6C75A6NL08 312 aa16.15■□□□□ 0.18
CDC42EP4-201ENST00000335793 IDH3BO43837 385 aa16.15■□□□□ 0.18
CDC42EP4-201ENST00000335793 SERPINB1P30740 379 aa16.15■□□□□ 0.18
CDC42EP4-201ENST00000335793 ZFP36L2P47974 494 aaKnown RBP16.15■□□□□ 0.18
CDC42EP4-201ENST00000335793 RING1Q06587 406 aa16.15■□□□□ 0.18
CDC42EP4-201ENST00000335793 C6orf141Q5SZD1 244 aa16.15■□□□□ 0.18
CDC42EP4-201ENST00000335793 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.15■□□□□ 0.18
CDC42EP4-201ENST00000335793 RASAL3Q86YV0 1011 aa16.15■□□□□ 0.18
CDC42EP4-201ENST00000335793 YTHDF1Q9BYJ9 559 aaKnown RBP16.15■□□□□ 0.18
CDC42EP4-201ENST00000335793 PCDHB7Q9Y5E2 793 aa16.15■□□□□ 0.18
CDC42EP4-201ENST00000335793 LOC730098B7Z3J9 87 aa16.15■□□□□ 0.18
CDC42EP4-201ENST00000335793 OR7A17O14581 309 aa16.15■□□□□ 0.18
CDC42EP4-201ENST00000335793 SYN3O14994 580 aa16.15■□□□□ 0.18
CDC42EP4-201ENST00000335793 SEPT4O43236 478 aa16.15■□□□□ 0.18
CDC42EP4-201ENST00000335793 NBNO60934 754 aa16.15■□□□□ 0.18
CDC42EP4-201ENST00000335793 SH3BGRLO75368 114 aa16.15■□□□□ 0.18
CDC42EP4-201ENST00000335793 DLGAP3O95886 979 aa16.15■□□□□ 0.18
CDC42EP4-201ENST00000335793 PRKCAP17252 672 aa16.15■□□□□ 0.18
CDC42EP4-201ENST00000335793 PIGAP37287 484 aa16.15■□□□□ 0.18
CDC42EP4-201ENST00000335793 ARHGDIAP52565 204 aa16.15■□□□□ 0.18
CDC42EP4-201ENST00000335793 PLA2G16P53816 162 aa16.15■□□□□ 0.18
CDC42EP4-201ENST00000335793 IFITM3Q01628 133 aa16.15■□□□□ 0.18
CDC42EP4-201ENST00000335793 STK11Q15831 433 aa16.15■□□□□ 0.18
CDC42EP4-201ENST00000335793 RTP2Q5QGT7 225 aa16.15■□□□□ 0.18
CDC42EP4-201ENST00000335793 ARMC12Q5T9G4 340 aa16.15■□□□□ 0.18
CDC42EP4-201ENST00000335793 TRAF7Q6Q0C0 670 aa16.15■□□□□ 0.18
CDC42EP4-201ENST00000335793 RAB2BQ8WUD1 216 aa16.15■□□□□ 0.18
CDC42EP4-201ENST00000335793 IKZF5Q9H5V7 419 aa16.15■□□□□ 0.18
CDC42EP4-201ENST00000335793 DHRS7Q9Y394 339 aa16.15■□□□□ 0.18
CDC42EP4-201ENST00000335793 DIRAS1O95057 198 aa16.14■□□□□ 0.18
CDC42EP4-201ENST00000335793 NPPAP01160 153 aa16.14■□□□□ 0.18
CDC42EP4-201ENST00000335793 EPB42P16452 691 aa16.14■□□□□ 0.18
CDC42EP4-201ENST00000335793 CCND3P30281 292 aaPredicted RBP16.14■□□□□ 0.18
CDC42EP4-201ENST00000335793 S100A3P33764 101 aa16.14■□□□□ 0.18
CDC42EP4-201ENST00000335793 OR1D2P34982 312 aa16.14■□□□□ 0.18
CDC42EP4-201ENST00000335793 MAGEA11P43364 429 aa16.14■□□□□ 0.18
CDC42EP4-201ENST00000335793 CACNG1Q06432 222 aa16.14■□□□□ 0.18
CDC42EP4-201ENST00000335793 CDH18Q13634 790 aa16.14■□□□□ 0.18
CDC42EP4-201ENST00000335793 C17orf99Q6UX52 265 aa16.14■□□□□ 0.18
CDC42EP4-201ENST00000335793 LYPD8Q6UX82 237 aa16.14■□□□□ 0.18
CDC42EP4-201ENST00000335793 ADAMTS16Q8TE57 1224 aa16.14■□□□□ 0.18
CDC42EP4-201ENST00000335793 SELENOMQ8WWX9 145 aa16.14■□□□□ 0.18
CDC42EP4-201ENST00000335793 ELMO1Q92556 727 aa16.14■□□□□ 0.18
CDC42EP4-201ENST00000335793 ASIC4Q96FT7 647 aa16.14■□□□□ 0.18
CDC42EP4-201ENST00000335793 DMRTB1Q96MA1 342 aa16.14■□□□□ 0.18
CDC42EP4-201ENST00000335793 NODALQ96S42 347 aa16.14■□□□□ 0.18
CDC42EP4-201ENST00000335793 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.14■□□□□ 0.18
CDC42EP4-201ENST00000335793 TBL1XO60907 577 aa16.14■□□□□ 0.17
CDC42EP4-201ENST00000335793 EOMESO95936 686 aa16.14■□□□□ 0.17
CDC42EP4-201ENST00000335793 ITGALP20701 1170 aa16.14■□□□□ 0.17
CDC42EP4-201ENST00000335793 PSMB9P28065 219 aa16.14■□□□□ 0.17
CDC42EP4-201ENST00000335793 CD47Q08722 323 aa16.14■□□□□ 0.17
CDC42EP4-201ENST00000335793 CRHR2Q13324 411 aa16.14■□□□□ 0.17
CDC42EP4-201ENST00000335793 FUT10Q6P4F1 479 aa16.14■□□□□ 0.17
CDC42EP4-201ENST00000335793 NECAB2Q7Z6G3 386 aa16.14■□□□□ 0.17
CDC42EP4-201ENST00000335793 SLC22A15Q8IZD6 547 aa16.14■□□□□ 0.17
CDC42EP4-201ENST00000335793 PAPD5Q8NDF8 572 aaKnown RBP16.14■□□□□ 0.17
CDC42EP4-201ENST00000335793 CNIH3Q8TBE1 160 aa16.14■□□□□ 0.17
CDC42EP4-201ENST00000335793 MAGED4Q96JG8 741 aa16.14■□□□□ 0.17
CDC42EP4-201ENST00000335793 RBM4BQ9BQ04 359 aaKnown RBP16.14■□□□□ 0.17
CDC42EP4-201ENST00000335793 RBM4Q9BWF3 364 aaKnown RBP16.14■□□□□ 0.17
CDC42EP4-201ENST00000335793 ACTL8Q9H568 366 aa16.14■□□□□ 0.17
CDC42EP4-201ENST00000335793 CARS2Q9HA77 564 aaKnown RBP16.14■□□□□ 0.17
CDC42EP4-201ENST00000335793 ARL15Q9NXU5 204 aa16.14■□□□□ 0.17
CDC42EP4-201ENST00000335793 GOLGA4Q13439 2230 aaKnown RBP16.14■□□□□ 0.17
CDC42EP4-201ENST00000335793 LOC100130705A0A1B0GUX0 176 aa16.14■□□□□ 0.17
CDC42EP4-201ENST00000335793 K7ERQ8 282 aa16.14■□□□□ 0.17
CDC42EP4-201ENST00000335793 RPLP2P05387 115 aaKnown RBP16.14■□□□□ 0.17
CDC42EP4-201ENST00000335793 CRHBPP24387 322 aa16.14■□□□□ 0.17
CDC42EP4-201ENST00000335793 IRF5Q13568 498 aa16.14■□□□□ 0.17
CDC42EP4-201ENST00000335793 DDX39BQ13838 428 aaKnown RBP16.14■□□□□ 0.17
CDC42EP4-201ENST00000335793 TTC23LQ6PF05 361 aa16.14■□□□□ 0.17
CDC42EP4-201ENST00000335793 RGL4Q8IZJ4 473 aa16.14■□□□□ 0.17
CDC42EP4-201ENST00000335793 SPARTQ8N0X7 666 aa16.14■□□□□ 0.17
CDC42EP4-201ENST00000335793 OR13F1Q8NGS4 319 aa16.14■□□□□ 0.17
CDC42EP4-201ENST00000335793 ELOVL6Q9H5J4 265 aa16.14■□□□□ 0.17
CDC42EP4-201ENST00000335793 ABCB10Q9NRK6 738 aa16.14■□□□□ 0.17
CDC42EP4-201ENST00000335793 RIMKLBQ9ULI2 386 aa16.14■□□□□ 0.17
CDC42EP4-201ENST00000335793 A0A1B0GVM2 712 aa16.13■□□□□ 0.17
CDC42EP4-201ENST00000335793 ASNA1O43681 348 aa16.13■□□□□ 0.17
CDC42EP4-201ENST00000335793 CKBP12277 381 aa16.13■□□□□ 0.17
CDC42EP4-201ENST00000335793 DGKAP23743 735 aa16.13■□□□□ 0.17
CDC42EP4-201ENST00000335793 DSC1Q08554 894 aa16.13■□□□□ 0.17
CDC42EP4-201ENST00000335793 GPR17Q13304 367 aa16.13■□□□□ 0.17
CDC42EP4-201ENST00000335793 SKIV2LQ15477 1246 aaKnown RBP16.13■□□□□ 0.17
CDC42EP4-201ENST00000335793 PAGE2BQ5JRK9 111 aa16.13■□□□□ 0.17
CDC42EP4-201ENST00000335793 DPP10Q8N608 796 aa16.13■□□□□ 0.17
CDC42EP4-201ENST00000335793 PYCR2Q96C36 320 aa16.13■□□□□ 0.17
CDC42EP4-201ENST00000335793 FUNDC2Q9BWH2 189 aa16.13■□□□□ 0.17
CDC42EP4-201ENST00000335793 ZFYVE1Q9HBF4 777 aa16.13■□□□□ 0.17
CDC42EP4-201ENST00000335793 TRPM5Q9NZQ8 1165 aa16.13■□□□□ 0.17
CDC42EP4-201ENST00000335793 KMOO15229 486 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms