RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 ZXDCQ2QGD7 858 aaPredicted RBP22.8■■□□□ 1.24
NDEL1-201ENST00000334527 PGS1Q32NB8 556 aa22.8■■□□□ 1.24
NDEL1-201ENST00000334527 MPPE1Q53F39 396 aa22.8■■□□□ 1.24
NDEL1-201ENST00000334527 XAF1Q6GPH4 301 aa22.8■■□□□ 1.24
NDEL1-201ENST00000334527 FAM43BQ6ZT52 329 aaPredicted RBP22.8■■□□□ 1.24
NDEL1-201ENST00000334527 METTL3Q86U44 580 aaKnown RBP22.8■■□□□ 1.24
NDEL1-201ENST00000334527 HOMEZQ8IX15 550 aa22.8■■□□□ 1.24
NDEL1-201ENST00000334527 EID3Q8N140 333 aa22.8■■□□□ 1.24
NDEL1-201ENST00000334527 SGCDQ92629 289 aa22.8■■□□□ 1.24
NDEL1-201ENST00000334527 HDAC2Q92769 488 aaKnown RBP22.8■■□□□ 1.24
NDEL1-201ENST00000334527 ITCHQ96J02 903 aa22.8■■□□□ 1.24
NDEL1-201ENST00000334527 MAGIXQ9H6Y5 334 aa22.8■■□□□ 1.24
NDEL1-201ENST00000334527 RMND5AQ9H871 391 aa22.8■■□□□ 1.24
NDEL1-201ENST00000334527 MAN2B2Q9Y2E5 1009 aa22.8■■□□□ 1.24
NDEL1-201ENST00000334527 SH3BP1Q9Y3L3 701 aa22.8■■□□□ 1.24
NDEL1-201ENST00000334527 MICAL3Q7RTP6 2002 aa22.8■■□□□ 1.24
NDEL1-201ENST00000334527 PLXNB3Q9ULL4 1909 aa22.8■■□□□ 1.24
NDEL1-201ENST00000334527 C16orf96A6NNT2 1141 aa22.79■■□□□ 1.24
NDEL1-201ENST00000334527 E2F6O75461 281 aa22.79■■□□□ 1.24
NDEL1-201ENST00000334527 B3GALT4O96024 378 aa22.79■■□□□ 1.24
NDEL1-201ENST00000334527 CD247P20963 164 aa22.79■■□□□ 1.24
NDEL1-201ENST00000334527 GZMMP51124 257 aa22.79■■□□□ 1.24
NDEL1-201ENST00000334527 KCNAB2Q13303 367 aa22.79■■□□□ 1.24
NDEL1-201ENST00000334527 CDKL4Q5MAI5 379 aa22.79■■□□□ 1.24
NDEL1-201ENST00000334527 ELMSAN1Q6PJG2 1045 aa22.79■■□□□ 1.24
NDEL1-201ENST00000334527 USP45Q70EL2 814 aa22.79■■□□□ 1.24
NDEL1-201ENST00000334527 DET1Q7L5Y6 550 aa22.79■■□□□ 1.24
NDEL1-201ENST00000334527 LRRC70Q7Z2Q7 622 aa22.79■■□□□ 1.24
NDEL1-201ENST00000334527 TMEM179BQ7Z7N9 219 aa22.79■■□□□ 1.24
NDEL1-201ENST00000334527 ZCCHC7Q8N3Z6 543 aaKnown RBP22.79■■□□□ 1.24
NDEL1-201ENST00000334527 FIBINQ8TAL6 211 aa22.79■■□□□ 1.24
NDEL1-201ENST00000334527 VOPP1Q96AW1 172 aa22.79■■□□□ 1.24
NDEL1-201ENST00000334527 KLHL42Q9P2K6 505 aa22.79■■□□□ 1.24
NDEL1-201ENST00000334527 TRIM64BA6NI03 449 aa22.79■■□□□ 1.24
NDEL1-201ENST00000334527 HS6ST1O60243 411 aa22.79■■□□□ 1.24
NDEL1-201ENST00000334527 SEC14L2O76054 403 aa22.79■■□□□ 1.24
NDEL1-201ENST00000334527 URODP06132 367 aa22.79■■□□□ 1.24
NDEL1-201ENST00000334527 PRPS2P11908 318 aa22.79■■□□□ 1.24
NDEL1-201ENST00000334527 MYCLP1P12525 358 aaPredicted RBP22.79■■□□□ 1.24
NDEL1-201ENST00000334527 SRCP12931 536 aa22.79■■□□□ 1.24
NDEL1-201ENST00000334527 PRKACGP22612 351 aa22.79■■□□□ 1.24
NDEL1-201ENST00000334527 LHCGRP22888 699 aa22.79■■□□□ 1.24
NDEL1-201ENST00000334527 TACR1P25103 407 aa22.79■■□□□ 1.24
NDEL1-201ENST00000334527 GABRR2P28476 465 aa22.79■■□□□ 1.24
NDEL1-201ENST00000334527 SNRPD1P62314 119 aaKnown RBP22.79■■□□□ 1.24
NDEL1-201ENST00000334527 PTSQ03393 145 aa22.79■■□□□ 1.24
NDEL1-201ENST00000334527 VAC14Q08AM6 782 aa22.79■■□□□ 1.24
NDEL1-201ENST00000334527 MYBPC3Q14896 1274 aa22.79■■□□□ 1.24
NDEL1-201ENST00000334527 MEP1AQ16819 746 aa22.79■■□□□ 1.24
NDEL1-201ENST00000334527 CHDHQ8NE62 594 aaPredicted RBP22.79■■□□□ 1.24
NDEL1-201ENST00000334527 PYCR2Q96C36 320 aa22.79■■□□□ 1.24
NDEL1-201ENST00000334527 PPT2Q9UMR5 302 aa22.79■■□□□ 1.24
NDEL1-201ENST00000334527 OR56A5P0C7T3 313 aa22.78■■□□□ 1.24
NDEL1-201ENST00000334527 DCTP40126 519 aa22.78■■□□□ 1.24
NDEL1-201ENST00000334527 CDKN2CP42773 168 aa22.78■■□□□ 1.24
NDEL1-201ENST00000334527 SKIV2LQ15477 1246 aaKnown RBP22.78■■□□□ 1.24
NDEL1-201ENST00000334527 C6orf141Q5SZD1 244 aa22.78■■□□□ 1.24
NDEL1-201ENST00000334527 TTC23LQ6PF05 361 aa22.78■■□□□ 1.24
NDEL1-201ENST00000334527 OR5K1Q8NHB7 308 aa22.78■■□□□ 1.24
NDEL1-201ENST00000334527 LZICQ8WZA0 190 aa22.78■■□□□ 1.24
NDEL1-201ENST00000334527 SNX19Q92543 992 aa22.78■■□□□ 1.24
NDEL1-201ENST00000334527 NRBF2Q96F24 287 aa22.78■■□□□ 1.24
NDEL1-201ENST00000334527 ZNF558Q96NG5 402 aa22.78■■□□□ 1.24
NDEL1-201ENST00000334527 HERC2P3Q9BVR0 1158 aa22.78■■□□□ 1.24
NDEL1-201ENST00000334527 SLC12A9Q9BXP2 914 aa22.78■■□□□ 1.24
NDEL1-201ENST00000334527 MBD1Q9UIS9 605 aaPredicted RBP22.78■■□□□ 1.24
NDEL1-201ENST00000334527 KCNE1BA0A087WTH5 132 aa22.78■■□□□ 1.24
NDEL1-201ENST00000334527 PER2O15055 1255 aa22.78■■□□□ 1.24
NDEL1-201ENST00000334527 HIST1H2AGP0C0S8 130 aaPredicted RBP22.78■■□□□ 1.24
NDEL1-201ENST00000334527 SDC1P18827 310 aa22.78■■□□□ 1.24
NDEL1-201ENST00000334527 HIST1H2ADP20671 130 aa22.78■■□□□ 1.24
NDEL1-201ENST00000334527 AOAHP28039 575 aa22.78■■□□□ 1.24
NDEL1-201ENST00000334527 TMBIM6P55061 237 aa22.78■■□□□ 1.24
NDEL1-201ENST00000334527 CTU2Q2VPK5 515 aaKnown RBP22.78■■□□□ 1.24
NDEL1-201ENST00000334527 MPP7Q5T2T1 576 aa22.78■■□□□ 1.24
NDEL1-201ENST00000334527 HTR3DQ70Z44 454 aa22.78■■□□□ 1.24
NDEL1-201ENST00000334527 SLC39A11Q8N1S5 342 aa22.78■■□□□ 1.24
NDEL1-201ENST00000334527 CPXM2Q8N436 756 aa22.78■■□□□ 1.24
NDEL1-201ENST00000334527 BEND7Q8N7W2 519 aaPredicted RBP22.78■■□□□ 1.24
NDEL1-201ENST00000334527 OR10Q1Q8NGQ4 319 aa22.78■■□□□ 1.24
NDEL1-201ENST00000334527 TBC1D15Q8TC07 691 aa22.78■■□□□ 1.24
NDEL1-201ENST00000334527 FNDC8Q8TC99 324 aa22.78■■□□□ 1.24
NDEL1-201ENST00000334527 HIST1H2AHQ96KK5 128 aa22.78■■□□□ 1.24
NDEL1-201ENST00000334527 HIST1H2AJQ99878 128 aa22.78■■□□□ 1.24
NDEL1-201ENST00000334527 H2AFJQ9BTM1 129 aa22.78■■□□□ 1.24
NDEL1-201ENST00000334527 LHPPQ9H008 270 aa22.78■■□□□ 1.24
NDEL1-201ENST00000334527 SUV39H2Q9H5I1 410 aa22.78■■□□□ 1.24
NDEL1-201ENST00000334527 U3KQV3 271 aa22.78■■□□□ 1.24
NDEL1-201ENST00000334527 LRATO95237 230 aa22.77■■□□□ 1.24
NDEL1-201ENST00000334527 PTCHD3Q3KNS1 767 aa22.77■■□□□ 1.24
NDEL1-201ENST00000334527 GGTA1PQ4G0N0 100 aa22.77■■□□□ 1.24
NDEL1-201ENST00000334527 GAREM2Q75VX8 874 aa22.77■■□□□ 1.24
NDEL1-201ENST00000334527 TCAIMQ8N3R3 496 aa22.77■■□□□ 1.24
NDEL1-201ENST00000334527 GMEB1Q9Y692 573 aa22.77■■□□□ 1.24
NDEL1-201ENST00000334527 PABPN1LA6NDY0 278 aaKnown RBP22.77■■□□□ 1.24
NDEL1-201ENST00000334527 RECQL5O94762 991 aaPredicted RBP22.77■■□□□ 1.24
NDEL1-201ENST00000334527 C8GP07360 202 aa22.77■■□□□ 1.24
NDEL1-201ENST00000334527 CCNA2P20248 432 aa22.77■■□□□ 1.24
NDEL1-201ENST00000334527 MAP4P27816 1152 aaKnown RBP22.77■■□□□ 1.24
NDEL1-201ENST00000334527 PTPN6P29350 595 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms