RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 AKT1P31749 480 aa12.49□□□□□ -0.41
CCDC60-201ENST00000327554 STC1P52823 247 aa12.49□□□□□ -0.41
CCDC60-201ENST00000327554 NRG1Q02297 640 aaPredicted RBP12.49□□□□□ -0.41
CCDC60-201ENST00000327554 ELP6Q0PNE2 266 aa12.49□□□□□ -0.41
CCDC60-201ENST00000327554 MAPKAPK3Q16644 382 aa12.49□□□□□ -0.41
CCDC60-201ENST00000327554 SMU1Q2TAY7 513 aa12.49□□□□□ -0.41
CCDC60-201ENST00000327554 MRNIPQ6NTE8 343 aa12.49□□□□□ -0.41
CCDC60-201ENST00000327554 CYP4Z2PQ8N1L4 340 aa12.49□□□□□ -0.41
CCDC60-201ENST00000327554 DEPDC4Q8N2C3 294 aa12.49□□□□□ -0.41
CCDC60-201ENST00000327554 SLC7A6Q92536 515 aa12.49□□□□□ -0.41
CCDC60-201ENST00000327554 CATSPERBQ9H7T0 1116 aa12.49□□□□□ -0.41
CCDC60-201ENST00000327554 C1orf109Q9NX04 203 aa12.49□□□□□ -0.41
CCDC60-201ENST00000327554 PSORS1C1Q9UIG5 152 aa12.49□□□□□ -0.41
CCDC60-201ENST00000327554 MOSPD1Q9UJG1 213 aa12.49□□□□□ -0.41
CCDC60-201ENST00000327554 SLC12A8A0AV02 714 aa12.49□□□□□ -0.41
CCDC60-201ENST00000327554 BTN3A1O00481 513 aa12.49□□□□□ -0.41
CCDC60-201ENST00000327554 HOXB6P17509 224 aaKnown RBP12.49□□□□□ -0.41
CCDC60-201ENST00000327554 PKLRP30613 574 aa12.49□□□□□ -0.41
CCDC60-201ENST00000327554 OR3A3P47888 321 aa12.49□□□□□ -0.41
CCDC60-201ENST00000327554 RPP38P78345 283 aaKnown RBP12.49□□□□□ -0.41
CCDC60-201ENST00000327554 RAD51Q06609 339 aa12.49□□□□□ -0.41
CCDC60-201ENST00000327554 TRIM71Q2Q1W2 868 aaKnown RBP12.49□□□□□ -0.41
CCDC60-201ENST00000327554 FAM171A1Q5VUB5 890 aa12.49□□□□□ -0.41
CCDC60-201ENST00000327554 ATG9BQ674R7 924 aa12.49□□□□□ -0.41
CCDC60-201ENST00000327554 OR8H2Q8N162 312 aa12.49□□□□□ -0.41
CCDC60-201ENST00000327554 NATD1Q8N6N6 113 aa12.49□□□□□ -0.41
CCDC60-201ENST00000327554 TP53I13Q8NBR0 393 aaPredicted RBP12.49□□□□□ -0.41
CCDC60-201ENST00000327554 SLC30A2Q9BRI3 323 aa12.49□□□□□ -0.41
CCDC60-201ENST00000327554 CHCHD6Q9BRQ6 235 aa12.49□□□□□ -0.41
CCDC60-201ENST00000327554 PDGFCQ9NRA1 345 aa12.49□□□□□ -0.41
CCDC60-201ENST00000327554 SIRT5Q9NXA8 310 aa12.49□□□□□ -0.41
CCDC60-201ENST00000327554 STMN3Q9NZ72 180 aa12.49□□□□□ -0.41
CCDC60-201ENST00000327554 PDP1Q9P0J1 537 aaPredicted RBP12.49□□□□□ -0.41
CCDC60-201ENST00000327554 CSADQ9Y600 493 aa12.49□□□□□ -0.41
CCDC60-201ENST00000327554 ARL5AQ9Y689 179 aa12.49□□□□□ -0.41
CCDC60-201ENST00000327554 MYO1GB0I1T2 1018 aa12.48□□□□□ -0.41
CCDC60-201ENST00000327554 PAGE1O75459 146 aa12.48□□□□□ -0.41
CCDC60-201ENST00000327554 FKBP9O95302 570 aa12.48□□□□□ -0.41
CCDC60-201ENST00000327554 IGLV3-25P01717 112 aa12.48□□□□□ -0.41
CCDC60-201ENST00000327554 IL7P13232 177 aa12.48□□□□□ -0.41
CCDC60-201ENST00000327554 OGNP20774 298 aaKnown RBP12.48□□□□□ -0.41
CCDC60-201ENST00000327554 FPR1P21462 350 aa12.48□□□□□ -0.41
CCDC60-201ENST00000327554 HNF4AP41235 474 aa12.48□□□□□ -0.41
CCDC60-201ENST00000327554 CSNK2BP67870 215 aa12.48□□□□□ -0.41
CCDC60-201ENST00000327554 ITKQ08881 620 aa12.48□□□□□ -0.41
CCDC60-201ENST00000327554 EIF4EBP2Q13542 120 aaPredicted RBP12.48□□□□□ -0.41
CCDC60-201ENST00000327554 SPANXN4Q5MJ08 99 aa12.48□□□□□ -0.41
CCDC60-201ENST00000327554 CCDC28AQ8IWP9 274 aa12.48□□□□□ -0.41
CCDC60-201ENST00000327554 FAM109AQ8N4B1 249 aa12.48□□□□□ -0.41
CCDC60-201ENST00000327554 OR13C4Q8NGS5 318 aa12.48□□□□□ -0.41
CCDC60-201ENST00000327554 METTL6Q8TCB7 284 aa12.48□□□□□ -0.41
CCDC60-201ENST00000327554 ZNF675Q8TD23 568 aa12.48□□□□□ -0.41
CCDC60-201ENST00000327554 CITED4Q96RK1 184 aa12.48□□□□□ -0.41
CCDC60-201ENST00000327554 CPPED1Q9BRF8 314 aaPredicted RBP12.48□□□□□ -0.41
CCDC60-201ENST00000327554 KRT84Q9NSB2 600 aa12.48□□□□□ -0.41
CCDC60-201ENST00000327554 CATSPERZQ9NTU4 200 aa12.48□□□□□ -0.41
CCDC60-201ENST00000327554 DNMT3LQ9UJW3 386 aa12.48□□□□□ -0.41
CCDC60-201ENST00000327554 CCL27Q9Y4X3 112 aa12.48□□□□□ -0.41
CCDC60-201ENST00000327554 PAPPA2Q9BXP8 1791 aa12.48□□□□□ -0.41
CCDC60-201ENST00000327554 SLITRK5O94991 958 aa12.48□□□□□ -0.41
CCDC60-201ENST00000327554 DIRAS1O95057 198 aa12.48□□□□□ -0.41
CCDC60-201ENST00000327554 CDK1P06493 297 aa12.48□□□□□ -0.41
CCDC60-201ENST00000327554 M6PRP20645 277 aa12.48□□□□□ -0.41
CCDC60-201ENST00000327554 DNAJA1P31689 397 aaKnown RBP12.48□□□□□ -0.41
CCDC60-201ENST00000327554 TNFSF8P32971 234 aa12.48□□□□□ -0.41
CCDC60-201ENST00000327554 RPS5P46782 204 aaKnown RBP12.48□□□□□ -0.41
CCDC60-201ENST00000327554 CRISP3P54108 245 aa12.48□□□□□ -0.41
CCDC60-201ENST00000327554 SLC10A7Q0GE19 358 aa12.48□□□□□ -0.41
CCDC60-201ENST00000327554 NPRL3Q12980 569 aa12.48□□□□□ -0.41
CCDC60-201ENST00000327554 DDR2Q16832 855 aa12.48□□□□□ -0.41
CCDC60-201ENST00000327554 FAM214AQ32MH5 1076 aa12.48□□□□□ -0.41
CCDC60-201ENST00000327554 GPAT3Q53EU6 434 aa12.48□□□□□ -0.41
CCDC60-201ENST00000327554 GJC2Q5T442 439 aaPredicted RBP12.48□□□□□ -0.41
CCDC60-201ENST00000327554 PAF1Q8N7H5 531 aa12.48□□□□□ -0.41
CCDC60-201ENST00000327554 OR5H6Q8NGV6 325 aa12.48□□□□□ -0.41
CCDC60-201ENST00000327554 PCED1BQ96HM7 432 aa12.48□□□□□ -0.41
CCDC60-201ENST00000327554 KLHL5Q96PQ7 755 aa12.48□□□□□ -0.41
CCDC60-201ENST00000327554 GON7Q9BXV9 100 aa12.48□□□□□ -0.41
CCDC60-201ENST00000327554 ROGDIQ9GZN7 287 aa12.48□□□□□ -0.41
CCDC60-201ENST00000327554 MKRN2Q9H000 416 aaKnown RBP12.48□□□□□ -0.41
CCDC60-201ENST00000327554 SPATC1LQ9H0A9 340 aa12.48□□□□□ -0.41
CCDC60-201ENST00000327554 RUBCNLQ9H714 662 aa12.48□□□□□ -0.41
CCDC60-201ENST00000327554 FKBP14Q9NWM8 211 aa12.48□□□□□ -0.41
CCDC60-201ENST00000327554 MPP6Q9NZW5 540 aa12.48□□□□□ -0.41
CCDC60-201ENST00000327554 PCDHGA6Q9Y5G7 932 aa12.48□□□□□ -0.41
CCDC60-201ENST00000327554 UBA6A0AVT1 1052 aaPredicted RBP12.47□□□□□ -0.41
CCDC60-201ENST00000327554 MYBPHLA2RUH7 354 aa12.47□□□□□ -0.41
CCDC60-201ENST00000327554 PDHXO00330 501 aa12.47□□□□□ -0.41
CCDC60-201ENST00000327554 ONECUT3O60422 494 aaPredicted RBP12.47□□□□□ -0.41
CCDC60-201ENST00000327554 RPP40O75818 363 aaKnown RBP12.47□□□□□ -0.41
CCDC60-201ENST00000327554 TSPAN12O95859 305 aa12.47□□□□□ -0.41
CCDC60-201ENST00000327554 PGRP06401 933 aa12.47□□□□□ -0.41
CCDC60-201ENST00000327554 ADORA3P0DMS8 318 aa12.47□□□□□ -0.41
CCDC60-201ENST00000327554 RGS6P49758 472 aa12.47□□□□□ -0.41
CCDC60-201ENST00000327554 ARHGDIAP52565 204 aa12.47□□□□□ -0.41
CCDC60-201ENST00000327554 RPL38P63173 70 aaKnown RBP12.47□□□□□ -0.41
CCDC60-201ENST00000327554 GALNT3Q14435 633 aa12.47□□□□□ -0.41
CCDC60-201ENST00000327554 ABRAXAS2Q15018 415 aa12.47□□□□□ -0.41
CCDC60-201ENST00000327554 CDONQ4KMG0 1287 aa12.47□□□□□ -0.41
CCDC60-201ENST00000327554 PRAMEF18Q5VWM3 479 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms