RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 IL26Q9NPH9 171 aa19.41■□□□□ 0.7
SOX2-201ENST00000325404 VPS51Q9UID3 782 aa19.41■□□□□ 0.7
SOX2-201ENST00000325404 ORC6Q9Y5N6 252 aa19.41■□□□□ 0.7
SOX2-201ENST00000325404 PRSS21Q9Y6M0 314 aa19.41■□□□□ 0.7
SOX2-201ENST00000325404 HSPE1-MOB4S4R3N1 261 aa19.41■□□□□ 0.7
SOX2-201ENST00000325404 LOC730098B7Z3J9 87 aa19.41■□□□□ 0.7
SOX2-201ENST00000325404 FFAR3O14843 346 aa19.41■□□□□ 0.7
SOX2-201ENST00000325404 GPR42O15529 346 aa19.41■□□□□ 0.7
SOX2-201ENST00000325404 FOXD2O60548 495 aaPredicted RBP19.41■□□□□ 0.7
SOX2-201ENST00000325404 CLDN9O95484 217 aa19.41■□□□□ 0.7
SOX2-201ENST00000325404 SOD2P04179 222 aa19.41■□□□□ 0.7
SOX2-201ENST00000325404 CTPS1P17812 591 aa19.41■□□□□ 0.7
SOX2-201ENST00000325404 MZF1P28698 734 aaPredicted RBP19.41■□□□□ 0.7
SOX2-201ENST00000325404 PIGAP37287 484 aa19.41■□□□□ 0.7
SOX2-201ENST00000325404 ABHD18Q0P651 414 aa19.41■□□□□ 0.7
SOX2-201ENST00000325404 MEP1AQ16819 746 aa19.41■□□□□ 0.7
SOX2-201ENST00000325404 LRRC26Q2I0M4 334 aa19.41■□□□□ 0.7
SOX2-201ENST00000325404 CTU2Q2VPK5 515 aaKnown RBP19.41■□□□□ 0.7
SOX2-201ENST00000325404 LAIR2Q6ISS4 152 aa19.41■□□□□ 0.7
SOX2-201ENST00000325404 C16orf87Q6PH81 154 aa19.41■□□□□ 0.7
SOX2-201ENST00000325404 SPESP1Q6UW49 350 aa19.41■□□□□ 0.7
SOX2-201ENST00000325404 TMEM132CQ8N3T6 1108 aa19.41■□□□□ 0.7
SOX2-201ENST00000325404 BPIFB6Q8NFQ5 453 aa19.41■□□□□ 0.7
SOX2-201ENST00000325404 TESCQ96BS2 214 aa19.41■□□□□ 0.7
SOX2-201ENST00000325404 ALG14Q96F25 216 aa19.41■□□□□ 0.7
SOX2-201ENST00000325404 TMEM169Q96HH4 297 aa19.41■□□□□ 0.7
SOX2-201ENST00000325404 PYURFQ96I23 114 aa19.41■□□□□ 0.7
SOX2-201ENST00000325404 PAWRQ96IZ0 340 aaKnown RBP19.41■□□□□ 0.7
SOX2-201ENST00000325404 CCDC138Q96M89 665 aa19.41■□□□□ 0.7
SOX2-201ENST00000325404 TNKS2Q9H2K2 1166 aa19.41■□□□□ 0.7
SOX2-201ENST00000325404 SERHLQ9NQF3 203 aa19.41■□□□□ 0.7
SOX2-201ENST00000325404 FARSBQ9NSD9 589 aaKnown RBP19.41■□□□□ 0.7
SOX2-201ENST00000325404 PCDHB14Q9Y5E9 798 aa19.41■□□□□ 0.7
SOX2-201ENST00000325404 A0A0U1RQS6 177 aa19.4■□□□□ 0.7
SOX2-201ENST00000325404 AGAP14A8MT82 685 aa19.4■□□□□ 0.7
SOX2-201ENST00000325404 GFRA2O00451 464 aa19.4■□□□□ 0.7
SOX2-201ENST00000325404 SOCS5O75159 536 aa19.4■□□□□ 0.7
SOX2-201ENST00000325404 TRIM16O95361 564 aa19.4■□□□□ 0.7
SOX2-201ENST00000325404 ALPIP09923 528 aa19.4■□□□□ 0.7
SOX2-201ENST00000325404 IST1P53990 364 aa19.4■□□□□ 0.7
SOX2-201ENST00000325404 RPS14P62263 151 aaKnown RBP19.4■□□□□ 0.7
SOX2-201ENST00000325404 PLIN5Q00G26 463 aa19.4■□□□□ 0.7
SOX2-201ENST00000325404 GRAMD4Q6IC98 578 aa19.4■□□□□ 0.7
SOX2-201ENST00000325404 DCP2Q8IU60 420 aaKnown RBP19.4■□□□□ 0.7
SOX2-201ENST00000325404 PGBD3Q8N328 593 aa19.4■□□□□ 0.7
SOX2-201ENST00000325404 KRTCAP2Q8N6L1 136 aa19.4■□□□□ 0.7
SOX2-201ENST00000325404 ARL10Q8N8L6 244 aa19.4■□□□□ 0.7
SOX2-201ENST00000325404 ZNF689Q96CS4 500 aaPredicted RBP19.4■□□□□ 0.7
SOX2-201ENST00000325404 FAM120BQ96EK7 910 aaKnown RBP19.4■□□□□ 0.7
SOX2-201ENST00000325404 CSF3RQ99062 836 aa19.4■□□□□ 0.7
SOX2-201ENST00000325404 RNF38Q9H0F5 515 aa19.4■□□□□ 0.7
SOX2-201ENST00000325404 ZNF106Q9H2Y7 1883 aaKnown RBP19.4■□□□□ 0.7
SOX2-201ENST00000325404 AFF4Q9UHB7 1163 aaKnown RBP19.4■□□□□ 0.7
SOX2-201ENST00000325404 ENPP5Q9UJA9 477 aa19.4■□□□□ 0.7
SOX2-201ENST00000325404 ERVW-1Q9UQF0 538 aa19.4■□□□□ 0.7
SOX2-201ENST00000325404 ANKRD12Q6UB98 2062 aa19.4■□□□□ 0.7
SOX2-201ENST00000325404 SERTM1A2A2V5 107 aa19.4■□□□□ 0.7
SOX2-201ENST00000325404 SLC1A7O00341 560 aa19.4■□□□□ 0.7
SOX2-201ENST00000325404 PER2O15055 1255 aa19.4■□□□□ 0.7
SOX2-201ENST00000325404 TBL1XO60907 577 aa19.4■□□□□ 0.7
SOX2-201ENST00000325404 GDF5P43026 501 aa19.4■□□□□ 0.7
SOX2-201ENST00000325404 PHEXP78562 749 aa19.4■□□□□ 0.7
SOX2-201ENST00000325404 ACOX1Q15067 660 aa19.4■□□□□ 0.7
SOX2-201ENST00000325404 SHQ1Q6PI26 577 aaKnown RBP19.4■□□□□ 0.7
SOX2-201ENST00000325404 ARMC5Q96C12 935 aa19.4■□□□□ 0.7
SOX2-201ENST00000325404 HHIPQ96QV1 700 aa19.4■□□□□ 0.7
SOX2-201ENST00000325404 NODALQ96S42 347 aa19.4■□□□□ 0.7
SOX2-201ENST00000325404 APOL5Q9BWW9 433 aa19.4■□□□□ 0.7
SOX2-201ENST00000325404 ZFP14Q9HCL3 533 aa19.4■□□□□ 0.7
SOX2-201ENST00000325404 KCTD5Q9NXV2 234 aa19.4■□□□□ 0.7
SOX2-201ENST00000325404 TMEFF2Q9UIK5 374 aaPredicted RBP19.4■□□□□ 0.7
SOX2-201ENST00000325404 FCF1Q9Y324 198 aaKnown RBP19.4■□□□□ 0.7
SOX2-201ENST00000325404 SH3GLB1Q9Y371 365 aa19.4■□□□□ 0.7
SOX2-201ENST00000325404 TMED5Q9Y3A6 229 aa19.4■□□□□ 0.7
SOX2-201ENST00000325404 GLYATL1P3A0A0U1RQE8 302 aa19.39■□□□□ 0.69
SOX2-201ENST00000325404 NOBOXO60393 691 aa19.39■□□□□ 0.69
SOX2-201ENST00000325404 ANXA5P08758 320 aa19.39■□□□□ 0.69
SOX2-201ENST00000325404 PCMT1P22061 227 aa19.39■□□□□ 0.69
SOX2-201ENST00000325404 MAPK1P28482 360 aa19.39■□□□□ 0.69
SOX2-201ENST00000325404 S100A3P33764 101 aa19.39■□□□□ 0.69
SOX2-201ENST00000325404 CD97P48960 835 aa19.39■□□□□ 0.69
SOX2-201ENST00000325404 DEFB103AP81534 67 aa19.39■□□□□ 0.69
SOX2-201ENST00000325404 KCNC4Q03721 635 aa19.39■□□□□ 0.69
SOX2-201ENST00000325404 ATXN7L2Q5T6C5 722 aaPredicted RBP19.39■□□□□ 0.69
SOX2-201ENST00000325404 GCNT7Q6ZNI0 430 aa19.39■□□□□ 0.69
SOX2-201ENST00000325404 TMCO2Q7Z6W1 182 aaPredicted RBP19.39■□□□□ 0.69
SOX2-201ENST00000325404 RBM23Q86U06 439 aaKnown RBP19.39■□□□□ 0.69
SOX2-201ENST00000325404 SLC39A11Q8N1S5 342 aa19.39■□□□□ 0.69
SOX2-201ENST00000325404 TCAIMQ8N3R3 496 aa19.39■□□□□ 0.69
SOX2-201ENST00000325404 SETD9Q8NE22 299 aa19.39■□□□□ 0.69
SOX2-201ENST00000325404 CCDC97Q96F63 343 aaPredicted RBP19.39■□□□□ 0.69
SOX2-201ENST00000325404 CLSTN3Q9BQT9 956 aa19.39■□□□□ 0.69
SOX2-201ENST00000325404 TBCDQ9BTW9 1192 aa19.39■□□□□ 0.69
SOX2-201ENST00000325404 SLC32A1Q9H598 525 aa19.39■□□□□ 0.69
SOX2-201ENST00000325404 BAG5Q9UL15 447 aa19.39■□□□□ 0.69
SOX2-201ENST00000325404 COL4A6Q14031 1691 aa19.39■□□□□ 0.69
SOX2-201ENST00000325404 AREL1O15033 823 aa19.39■□□□□ 0.69
SOX2-201ENST00000325404 UGT2B11O75310 529 aa19.39■□□□□ 0.69
SOX2-201ENST00000325404 SULT1C4O75897 302 aa19.39■□□□□ 0.69
SOX2-201ENST00000325404 TIMP1P01033 207 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms