RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 GAB3Q8WWW8 586 aa14.42□□□□□ -0.1
TCOF1-201ENST00000323668 TMEM125Q96AQ2 219 aa14.42□□□□□ -0.1
TCOF1-201ENST00000323668 RPL10LQ96L21 214 aaKnown RBP14.42□□□□□ -0.1
TCOF1-201ENST00000323668 ZNF347Q96SE7 839 aa14.42□□□□□ -0.1
TCOF1-201ENST00000323668 C1QTNF1Q9BXJ1 281 aa14.42□□□□□ -0.1
TCOF1-201ENST00000323668 TOR4AQ9NXH8 423 aa14.42□□□□□ -0.1
TCOF1-201ENST00000323668 SLC9A8Q9Y2E8 581 aa14.42□□□□□ -0.1
TCOF1-201ENST00000323668 ZNF510Q9Y2H8 683 aa14.42□□□□□ -0.1
TCOF1-201ENST00000323668 PPP6CO00743 305 aa14.41□□□□□ -0.1
TCOF1-201ENST00000323668 POU2F1P14859 743 aa14.41□□□□□ -0.1
TCOF1-201ENST00000323668 NDUFA5Q16718 116 aa14.41□□□□□ -0.1
TCOF1-201ENST00000323668 MZT2BQ6NZ67 158 aa14.41□□□□□ -0.1
TCOF1-201ENST00000323668 DEF8Q6ZN54 512 aa14.41□□□□□ -0.1
TCOF1-201ENST00000323668 TRUB1Q8WWH5 349 aaKnown RBP14.41□□□□□ -0.1
TCOF1-201ENST00000323668 ZNF641Q96N77 438 aaPredicted RBP14.41□□□□□ -0.1
TCOF1-201ENST00000323668 ZNF607Q96SK3 696 aa14.41□□□□□ -0.1
TCOF1-201ENST00000323668 CD244Q9BZW8 370 aa14.41□□□□□ -0.1
TCOF1-201ENST00000323668 R3HDMLQ9H3Y0 253 aa14.41□□□□□ -0.1
TCOF1-201ENST00000323668 MAP4K5Q9Y4K4 846 aa14.41□□□□□ -0.1
TCOF1-201ENST00000323668 PRR23AA6NEV1 266 aa14.41□□□□□ -0.1
TCOF1-201ENST00000323668 MANFP55145 182 aaKnown RBP14.41□□□□□ -0.1
TCOF1-201ENST00000323668 GPR17Q13304 367 aa14.41□□□□□ -0.1
TCOF1-201ENST00000323668 YAF2Q8IY57 180 aa14.41□□□□□ -0.1
TCOF1-201ENST00000323668 ACDQ96AP0 544 aa14.41□□□□□ -0.1
TCOF1-201ENST00000323668 PAWRQ96IZ0 340 aaKnown RBP14.41□□□□□ -0.1
TCOF1-201ENST00000323668 SMAD5Q99717 465 aaKnown RBP14.41□□□□□ -0.1
TCOF1-201ENST00000323668 SPATA5L1Q9BVQ7 753 aa14.41□□□□□ -0.1
TCOF1-201ENST00000323668 VPS29Q9UBQ0 182 aa14.41□□□□□ -0.1
TCOF1-201ENST00000323668 A0A1W2PQ67 120 aa14.41□□□□□ -0.1
TCOF1-201ENST00000323668 H3BM21 787 aa14.41□□□□□ -0.1
TCOF1-201ENST00000323668 FYNP06241 537 aa14.41□□□□□ -0.1
TCOF1-201ENST00000323668 OXTRP30559 389 aa14.41□□□□□ -0.1
TCOF1-201ENST00000323668 CCL23P55773 120 aa14.41□□□□□ -0.1
TCOF1-201ENST00000323668 LAPTM4AQ15012 233 aa14.41□□□□□ -0.1
TCOF1-201ENST00000323668 RAB41Q5JT25 222 aa14.41□□□□□ -0.1
TCOF1-201ENST00000323668 FOXB2Q5VYV0 432 aa14.41□□□□□ -0.1
TCOF1-201ENST00000323668 USP43Q70EL4 1123 aa14.41□□□□□ -0.1
TCOF1-201ENST00000323668 ARL14EPQ8N8R7 260 aaPredicted RBP14.41□□□□□ -0.1
TCOF1-201ENST00000323668 ACAT2Q9BWD1 397 aa14.41□□□□□ -0.1
TCOF1-201ENST00000323668 FAM118AQ9NWS6 357 aa14.41□□□□□ -0.1
TCOF1-201ENST00000323668 PCTPQ9UKL6 214 aa14.41□□□□□ -0.1
TCOF1-201ENST00000323668 CPQQ9Y646 472 aa14.41□□□□□ -0.1
TCOF1-201ENST00000323668 SLX4Q8IY92 1834 aa14.41□□□□□ -0.1
TCOF1-201ENST00000323668 AREL1O15033 823 aa14.41□□□□□ -0.1
TCOF1-201ENST00000323668 MAGEB3O15480 346 aa14.41□□□□□ -0.1
TCOF1-201ENST00000323668 ELNP15502 786 aa14.41□□□□□ -0.1
TCOF1-201ENST00000323668 SELPP16109 830 aa14.41□□□□□ -0.1
TCOF1-201ENST00000323668 PIGFQ07326 219 aa14.41□□□□□ -0.1
TCOF1-201ENST00000323668 PSAPL1Q6NUJ1 521 aa14.41□□□□□ -0.1
TCOF1-201ENST00000323668 FAM171BQ6P995 826 aa14.41□□□□□ -0.1
TCOF1-201ENST00000323668 ALKAL1Q6UXT8 129 aa14.41□□□□□ -0.1
TCOF1-201ENST00000323668 ARMC8Q8IUR7 673 aa14.41□□□□□ -0.1
TCOF1-201ENST00000323668 DBF4BQ8NFT6 615 aa14.41□□□□□ -0.1
TCOF1-201ENST00000323668 GTPBP3Q969Y2 492 aaKnown RBP14.41□□□□□ -0.1
TCOF1-201ENST00000323668 FAIMQ9NVQ4 179 aa14.41□□□□□ -0.1
TCOF1-201ENST00000323668 GULP1Q9UBP9 304 aa14.41□□□□□ -0.1
TCOF1-201ENST00000323668 SMCHD1A6NHR9 2005 aa14.41□□□□□ -0.1
TCOF1-201ENST00000323668 COL16A1Q07092 1604 aaPredicted RBP14.41□□□□□ -0.1
TCOF1-201ENST00000323668 ZNF195O14628 629 aa14.4□□□□□ -0.1
TCOF1-201ENST00000323668 TSC22D2O75157 780 aa14.4□□□□□ -0.1
TCOF1-201ENST00000323668 CSKP41240 450 aa14.4□□□□□ -0.1
TCOF1-201ENST00000323668 MCCD1P59942 119 aaPredicted RBP14.4□□□□□ -0.1
TCOF1-201ENST00000323668 ATG9BQ674R7 924 aa14.4□□□□□ -0.1
TCOF1-201ENST00000323668 KLHL17Q6TDP4 642 aa14.4□□□□□ -0.1
TCOF1-201ENST00000323668 CARM1Q86X55 608 aa14.4□□□□□ -0.1
TCOF1-201ENST00000323668 RGL4Q8IZJ4 473 aa14.4□□□□□ -0.1
TCOF1-201ENST00000323668 CORO1BQ9BR76 489 aa14.4□□□□□ -0.1
TCOF1-201ENST00000323668 FNDC11Q9BVV2 318 aa14.4□□□□□ -0.1
TCOF1-201ENST00000323668 ZDHHC3Q9NYG2 299 aa14.4□□□□□ -0.1
TCOF1-201ENST00000323668 CD84Q9UIB8 345 aa14.4□□□□□ -0.1
TCOF1-201ENST00000323668 H0Y858 1186 aa14.4□□□□□ -0.1
TCOF1-201ENST00000323668 ATG13O75143 517 aa14.4□□□□□ -0.1
TCOF1-201ENST00000323668 GLUD1P00367 558 aa14.4□□□□□ -0.1
TCOF1-201ENST00000323668 GPR1P46091 355 aa14.4□□□□□ -0.1
TCOF1-201ENST00000323668 MED27Q6P2C8 311 aa14.4□□□□□ -0.1
TCOF1-201ENST00000323668 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.4□□□□□ -0.1
TCOF1-201ENST00000323668 SCD5Q86SK9 330 aa14.4□□□□□ -0.1
TCOF1-201ENST00000323668 SLC22A14Q9Y267 594 aa14.4□□□□□ -0.1
TCOF1-201ENST00000323668 H3BMQ9 156 aa14.4□□□□□ -0.1
TCOF1-201ENST00000323668 BOLA2-SMG1P6H3BVE0 249 aa14.4□□□□□ -0.1
TCOF1-201ENST00000323668 MPZL2O60487 215 aa14.4□□□□□ -0.1
TCOF1-201ENST00000323668 INMTO95050 263 aa14.4□□□□□ -0.1
TCOF1-201ENST00000323668 CLDN7O95471 211 aa14.4□□□□□ -0.1
TCOF1-201ENST00000323668 POP4O95707 220 aaKnown RBP14.4□□□□□ -0.1
TCOF1-201ENST00000323668 HNMTP50135 292 aa14.4□□□□□ -0.1
TCOF1-201ENST00000323668 CLCN4P51793 760 aa14.4□□□□□ -0.1
TCOF1-201ENST00000323668 TGM3Q08188 693 aa14.4□□□□□ -0.1
TCOF1-201ENST00000323668 QPRTQ15274 297 aa14.4□□□□□ -0.1
TCOF1-201ENST00000323668 PYDC2Q56P42 97 aa14.4□□□□□ -0.1
TCOF1-201ENST00000323668 COLEC12Q5KU26 742 aa14.4□□□□□ -0.1
TCOF1-201ENST00000323668 CDC73Q6P1J9 531 aa14.4□□□□□ -0.1
TCOF1-201ENST00000323668 NEK5Q6P3R8 708 aa14.4□□□□□ -0.1
TCOF1-201ENST00000323668 ZNF280BQ86YH2 543 aa14.4□□□□□ -0.1
TCOF1-201ENST00000323668 ALDH16A1Q8IZ83 802 aa14.4□□□□□ -0.1
TCOF1-201ENST00000323668 OR13J1Q8NGT2 312 aa14.4□□□□□ -0.1
TCOF1-201ENST00000323668 COG8Q96MW5 612 aa14.4□□□□□ -0.1
TCOF1-201ENST00000323668 HTATIP2Q9BUP3 242 aa14.4□□□□□ -0.1
TCOF1-201ENST00000323668 SERHL2Q9H4I8 314 aa14.4□□□□□ -0.1
TCOF1-201ENST00000323668 TM9SF3Q9HD45 589 aa14.4□□□□□ -0.1
TCOF1-201ENST00000323668 SERHLQ9NQF3 203 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms