RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 BBS4Q96RK4 519 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 TM9SF3Q9HD45 589 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 HCFC1P51610 2035 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 POLEQ07864 2286 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 CLCA1A8K7I4 914 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 PDCD5O14737 125 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 CCNDBP1O95273 360 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 TXNP10599 105 aaKnown RBP6.92□□□□□ -1.3
SMC1A-201ENST00000322213 KCNA5P22460 613 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 BDNFP23560 247 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 CLCQ05315 142 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 FGL1Q08830 312 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 COL19A1Q14993 1142 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 TSTQ16762 297 aaKnown RBP6.92□□□□□ -1.3
SMC1A-201ENST00000322213 C4orf46Q504U0 113 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 DOK6Q6PKX4 331 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 DNERQ8NFT8 737 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 TMEM159Q96B96 161 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 NCOR1O75376 2440 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 RRN3P2A6NIE6 340 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 TGM6O95932 706 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 COL6A1P12109 1028 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 EIF2DP41214 584 aaKnown RBP6.92□□□□□ -1.3
SMC1A-201ENST00000322213 SLC1A2P43004 574 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 MAGEA12P43365 314 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 GSK3BP49841 420 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 AP2S1P53680 142 aaPredicted RBP6.92□□□□□ -1.3
SMC1A-201ENST00000322213 ADAM8P78325 824 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 CDK10Q15131 360 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 SYT16Q17RD7 645 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 PROX2Q3B8N5 592 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 CERCAMQ5T4B2 595 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 CADM2Q8N3J6 435 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 ADAMTS16Q8TE57 1224 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 SLC9A6Q92581 669 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 TXNDC15Q96J42 360 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 QRFPRQ96P65 431 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 PLIN4Q96Q06 1357 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 GAL3ST1Q99999 423 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 TRIM2Q9C040 744 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 IL1RAPQ9NPH3 570 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 NUDT15Q9NV35 164 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 TNFRSF10DQ9UBN6 386 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 STUB1Q9UNE7 303 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 NUMBLQ9Y6R0 609 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 MYOCOSA0A1B0GUC4 107 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 RIIAD1A6NNX1 92 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 TMEM63AO94886 807 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 CBX5P45973 191 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 SLC25A11Q02978 314 aaKnown RBP6.92□□□□□ -1.3
SMC1A-201ENST00000322213 ZNF460Q14592 562 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 USP45Q70EL2 814 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 CREB3L2Q70SY1 520 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 GPR65Q8IYL9 337 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 OR5H6Q8NGV6 325 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 STOML3Q8TAV4 291 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 DUSP16Q9BY84 665 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.92□□□□□ -1.3
SMC1A-201ENST00000322213 CNTN3Q9P232 1028 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 PCNX1Q96RV3 2341 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 TRAV6A0A075B6T7 132 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 CXorf49A8MYA2 514 aaPredicted RBP6.92□□□□□ -1.3
SMC1A-201ENST00000322213 C19orf81C9J6K1 198 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 MFSD11O43934 449 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 UBL4AP11441 157 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 FGF3P11487 239 aaPredicted RBP6.92□□□□□ -1.3
SMC1A-201ENST00000322213 BMP7P18075 431 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 KELP23276 732 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 FGL2Q14314 439 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 RHEBQ15382 184 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 EML3Q32P44 896 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 ZNF697Q5TEC3 545 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 GPALPP1Q8IXQ4 340 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 TMEM192Q8IY95 271 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 OR5J2Q8NH18 312 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 MRM3Q9HC36 420 aaKnown RBP6.92□□□□□ -1.3
SMC1A-201ENST00000322213 ABI2Q9NYB9 513 aaPredicted RBP6.92□□□□□ -1.3
SMC1A-201ENST00000322213 CLEC4AQ9UMR7 237 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 PCNX2A6NKB5 2137 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 RFPL3O75679 317 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 CLDN9O95484 217 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 CES1P23141 567 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 SOX10P56693 466 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 GRM3Q14832 879 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 TRAM1Q15629 374 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 C6orf141Q5SZD1 244 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 GPR158Q5T848 1215 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 AGAP6Q5VW22 663 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 TSPAN33Q86UF1 283 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 UNC93AQ86WB7 457 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 FBXO27Q8NI29 283 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 GATAD2BQ8WXI9 593 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 AGAP4Q96P64 663 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 FERD3LQ96RJ6 166 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 ZNF451Q9Y4E5 1061 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 VEGFAP15692 232 aaPredicted RBP6.91□□□□□ -1.3
SMC1A-201ENST00000322213 YWHAQP27348 245 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 CSTF2P33240 577 aaKnown RBP eCLIP6.91□□□□□ -1.3
SMC1A-201ENST00000322213 LIX1Q8N485 282 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 HDDC3Q8N4P3 179 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms