RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 ZNF648Q5T619 568 aaPredicted RBP16.27■□□□□ 0.2
PACS1-201ENST00000320580 RTL3Q8N8U3 475 aaKnown RBP16.27■□□□□ 0.2
PACS1-201ENST00000320580 C9orf43Q8TAL5 461 aaPredicted RBP16.27■□□□□ 0.2
PACS1-201ENST00000320580 CSF3RQ99062 836 aa16.27■□□□□ 0.2
PACS1-201ENST00000320580 MGLLQ99685 303 aa16.27■□□□□ 0.2
PACS1-201ENST00000320580 NUSAP1Q9BXS6 441 aaKnown RBP16.27■□□□□ 0.2
PACS1-201ENST00000320580 UBQLN2Q9UHD9 624 aa16.27■□□□□ 0.2
PACS1-201ENST00000320580 HCN4Q9Y3Q4 1203 aa16.27■□□□□ 0.2
PACS1-201ENST00000320580 TEX51A0A1B0GUA7 166 aa16.27■□□□□ 0.19
PACS1-201ENST00000320580 NOMO2Q5JPE7 1267 aa16.27■□□□□ 0.19
PACS1-201ENST00000320580 LAPTM4BQ86VI4 370 aa16.27■□□□□ 0.19
PACS1-201ENST00000320580 GALNT13Q8IUC8 556 aa16.27■□□□□ 0.19
PACS1-201ENST00000320580 LIX1Q8N485 282 aa16.27■□□□□ 0.19
PACS1-201ENST00000320580 DNAJA4Q8WW22 397 aaPredicted RBP16.27■□□□□ 0.19
PACS1-201ENST00000320580 CLPBQ9H078 707 aa16.27■□□□□ 0.19
PACS1-201ENST00000320580 PTGFRNQ9P2B2 879 aa16.27■□□□□ 0.19
PACS1-201ENST00000320580 RIMKLBQ9ULI2 386 aa16.27■□□□□ 0.19
PACS1-201ENST00000320580 MAB21L2Q9Y586 359 aa16.27■□□□□ 0.19
PACS1-201ENST00000320580 TIMM13Q9Y5L4 95 aaPredicted RBP16.27■□□□□ 0.19
PACS1-201ENST00000320580 NRAPQ86VF7 1730 aa16.27■□□□□ 0.19
PACS1-201ENST00000320580 MOXD2PA6NHM9 499 aa16.26■□□□□ 0.19
PACS1-201ENST00000320580 KCNA5P22460 613 aa16.26■□□□□ 0.19
PACS1-201ENST00000320580 UGT2B15P54855 530 aa16.26■□□□□ 0.19
PACS1-201ENST00000320580 SETMARQ53H47 684 aaPredicted RBP16.26■□□□□ 0.19
PACS1-201ENST00000320580 LRRC66Q68CR7 880 aa16.26■□□□□ 0.19
PACS1-201ENST00000320580 PAMR1Q6UXH9 720 aa16.26■□□□□ 0.19
PACS1-201ENST00000320580 ABHD15Q6UXT9 468 aa16.26■□□□□ 0.19
PACS1-201ENST00000320580 LINC00299Q6ZSB3 139 aa16.26■□□□□ 0.19
PACS1-201ENST00000320580 TNFSF13BQ9Y275 285 aa16.26■□□□□ 0.19
PACS1-201ENST00000320580 UBR2Q8IWV8 1755 aa16.26■□□□□ 0.19
PACS1-201ENST00000320580 TJP1Q07157 1748 aa16.26■□□□□ 0.19
PACS1-201ENST00000320580 ZNF197O14709 1029 aa16.26■□□□□ 0.19
PACS1-201ENST00000320580 DDCP20711 480 aa16.26■□□□□ 0.19
PACS1-201ENST00000320580 SH3BP2P78314 561 aa16.26■□□□□ 0.19
PACS1-201ENST00000320580 DBPQ10586 325 aaPredicted RBP16.26■□□□□ 0.19
PACS1-201ENST00000320580 ALFQ53S48 1182 aa16.26■□□□□ 0.19
PACS1-201ENST00000320580 TSPEARQ8WU66 669 aa16.26■□□□□ 0.19
PACS1-201ENST00000320580 KLHL5Q96PQ7 755 aa16.26■□□□□ 0.19
PACS1-201ENST00000320580 ENPP3O14638 875 aa16.26■□□□□ 0.19
PACS1-201ENST00000320580 IL4RP24394 825 aa16.26■□□□□ 0.19
PACS1-201ENST00000320580 DNAJB1P25685 340 aa16.26■□□□□ 0.19
PACS1-201ENST00000320580 ARL2P36404 184 aa16.26■□□□□ 0.19
PACS1-201ENST00000320580 PIGAP37287 484 aa16.26■□□□□ 0.19
PACS1-201ENST00000320580 HNRNPA0Q13151 305 aaKnown RBP16.26■□□□□ 0.19
PACS1-201ENST00000320580 TSTD2Q5T7W7 516 aa16.26■□□□□ 0.19
PACS1-201ENST00000320580 UNC93AQ86WB7 457 aa16.26■□□□□ 0.19
PACS1-201ENST00000320580 TP53INP2Q8IXH6 220 aa16.26■□□□□ 0.19
PACS1-201ENST00000320580 PNPLA1Q8N8W4 532 aa16.26■□□□□ 0.19
PACS1-201ENST00000320580 C18orf25Q96B23 403 aaPredicted RBP16.26■□□□□ 0.19
PACS1-201ENST00000320580 RPRD1AQ96P16 312 aaPredicted RBP16.26■□□□□ 0.19
PACS1-201ENST00000320580 GPR21Q99679 349 aa16.26■□□□□ 0.19
PACS1-201ENST00000320580 TTLL2Q9BWV7 592 aa16.26■□□□□ 0.19
PACS1-201ENST00000320580 LRTM1Q9HBL6 345 aa16.26■□□□□ 0.19
PACS1-201ENST00000320580 THUMPD1Q9NXG2 353 aaKnown RBP16.26■□□□□ 0.19
PACS1-201ENST00000320580 PPIEQ9UNP9 301 aaKnown RBP16.26■□□□□ 0.19
PACS1-201ENST00000320580 SLC30A4O14863 429 aa16.26■□□□□ 0.19
PACS1-201ENST00000320580 ALDOCP09972 364 aaKnown RBP16.26■□□□□ 0.19
PACS1-201ENST00000320580 TNFSF8P32971 234 aa16.26■□□□□ 0.19
PACS1-201ENST00000320580 CHRNEQ04844 493 aa16.26■□□□□ 0.19
PACS1-201ENST00000320580 HSD17B12Q53GQ0 312 aa16.26■□□□□ 0.19
PACS1-201ENST00000320580 C10orf62Q5T681 223 aaPredicted RBP16.26■□□□□ 0.19
PACS1-201ENST00000320580 ZNF613Q6PF04 617 aa16.26■□□□□ 0.19
PACS1-201ENST00000320580 LARP4Q71RC2 724 aaKnown RBP eCLIP16.26■□□□□ 0.19
PACS1-201ENST00000320580 TMEM192Q8IY95 271 aa16.26■□□□□ 0.19
PACS1-201ENST00000320580 GLB1L3Q8NCI6 653 aaPredicted RBP16.26■□□□□ 0.19
PACS1-201ENST00000320580 NELL1Q92832 810 aa16.26■□□□□ 0.19
PACS1-201ENST00000320580 EXOC2Q96KP1 924 aa16.26■□□□□ 0.19
PACS1-201ENST00000320580 ADGRE3Q9BY15 652 aa16.26■□□□□ 0.19
PACS1-201ENST00000320580 UXTQ9UBK9 157 aaPredicted RBP16.26■□□□□ 0.19
PACS1-201ENST00000320580 MYH9P35579 1960 aaKnown RBP16.26■□□□□ 0.19
PACS1-201ENST00000320580 TRAV6A0A075B6T7 132 aa16.25■□□□□ 0.19
PACS1-201ENST00000320580 A0A096LPI6 279 aa16.25■□□□□ 0.19
PACS1-201ENST00000320580 H3BUI4 141 aa16.25■□□□□ 0.19
PACS1-201ENST00000320580 H7C2Y5 167 aa16.25■□□□□ 0.19
PACS1-201ENST00000320580 TOXO94900 526 aa16.25■□□□□ 0.19
PACS1-201ENST00000320580 KCNK2O95069 426 aa16.25■□□□□ 0.19
PACS1-201ENST00000320580 S100A6P06703 90 aa16.25■□□□□ 0.19
PACS1-201ENST00000320580 C21orf33P30042 268 aaPredicted RBP16.25■□□□□ 0.19
PACS1-201ENST00000320580 NUP62P37198 522 aaPredicted RBP16.25■□□□□ 0.19
PACS1-201ENST00000320580 EMX2Q04743 252 aa16.25■□□□□ 0.19
PACS1-201ENST00000320580 B3GNT8Q7Z7M8 397 aa16.25■□□□□ 0.19
PACS1-201ENST00000320580 C7orf57Q8NEG2 295 aa16.25■□□□□ 0.19
PACS1-201ENST00000320580 UQCC2Q9BRT2 126 aa16.25■□□□□ 0.19
PACS1-201ENST00000320580 ELP3Q9H9T3 547 aa16.25■□□□□ 0.19
PACS1-201ENST00000320580 C11orf16Q9NQ32 467 aa16.25■□□□□ 0.19
PACS1-201ENST00000320580 FAM105AQ9NUU6 356 aa16.25■□□□□ 0.19
PACS1-201ENST00000320580 SLAMF8Q9P0V8 285 aa16.25■□□□□ 0.19
PACS1-201ENST00000320580 DNMT3LQ9UJW3 386 aa16.25■□□□□ 0.19
PACS1-201ENST00000320580 CDV3Q9UKY7 258 aaKnown RBP16.25■□□□□ 0.19
PACS1-201ENST00000320580 EEDO75530 441 aaKnown RBP16.25■□□□□ 0.19
PACS1-201ENST00000320580 FSHRP23945 695 aa16.25■□□□□ 0.19
PACS1-201ENST00000320580 RPS12P25398 132 aaKnown RBP16.25■□□□□ 0.19
PACS1-201ENST00000320580 HTR3AP46098 478 aa16.25■□□□□ 0.19
PACS1-201ENST00000320580 PRKCDQ05655 676 aa16.25■□□□□ 0.19
PACS1-201ENST00000320580 IQCCQ4KMZ1 466 aa16.25■□□□□ 0.19
PACS1-201ENST00000320580 FAM205BPQ63HN1 556 aa16.25■□□□□ 0.19
PACS1-201ENST00000320580 LSMEM1Q8N8F7 131 aa16.25■□□□□ 0.19
PACS1-201ENST00000320580 OR4L1Q8NH43 312 aa16.25■□□□□ 0.19
PACS1-201ENST00000320580 NACC2Q96BF6 587 aa16.25■□□□□ 0.19
PACS1-201ENST00000320580 ASIC4Q96FT7 647 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms