RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 LCHNA4D1U4 455 aa9.44□□□□□ -0.9
PTPRA-202ENST00000318266 HAT1O14929 419 aa9.44□□□□□ -0.9
PTPRA-202ENST00000318266 ANKRD28O15084 1053 aa9.44□□□□□ -0.9
PTPRA-202ENST00000318266 MUSKO15146 869 aa9.44□□□□□ -0.9
PTPRA-202ENST00000318266 TLL1O43897 1013 aa9.44□□□□□ -0.9
PTPRA-202ENST00000318266 AOC2O75106 756 aa9.44□□□□□ -0.9
PTPRA-202ENST00000318266 LRATO95237 230 aa9.44□□□□□ -0.9
PTPRA-202ENST00000318266 NPPAP01160 153 aa9.44□□□□□ -0.9
PTPRA-202ENST00000318266 PGRP06401 933 aa9.44□□□□□ -0.9
PTPRA-202ENST00000318266 ARHGDIAP52565 204 aa9.44□□□□□ -0.9
PTPRA-202ENST00000318266 DEFA1P59665 94 aa9.44□□□□□ -0.9
PTPRA-202ENST00000318266 DEFA3P59666 94 aa9.44□□□□□ -0.9
PTPRA-202ENST00000318266 SPANXN2Q5MJ10 180 aa9.44□□□□□ -0.9
PTPRA-202ENST00000318266 LYPD8Q6UX82 237 aa9.44□□□□□ -0.9
PTPRA-202ENST00000318266 LINC00299Q6ZSB3 139 aa9.44□□□□□ -0.9
PTPRA-202ENST00000318266 EFL1Q7Z2Z2 1120 aaKnown RBP9.44□□□□□ -0.9
PTPRA-202ENST00000318266 UBE2J2Q8N2K1 259 aa9.44□□□□□ -0.9
PTPRA-202ENST00000318266 CADM2Q8N3J6 435 aa9.44□□□□□ -0.9
PTPRA-202ENST00000318266 RMDN1Q96DB5 314 aa9.44□□□□□ -0.9
PTPRA-202ENST00000318266 CDCA5Q96FF9 252 aa9.44□□□□□ -0.9
PTPRA-202ENST00000318266 CDKN2AIPNLQ96HQ2 116 aa9.44□□□□□ -0.9
PTPRA-202ENST00000318266 OR2B2Q9GZK3 357 aa9.44□□□□□ -0.9
PTPRA-202ENST00000318266 ATP13A1Q9HD20 1204 aa9.44□□□□□ -0.9
PTPRA-202ENST00000318266 SAMHD1Q9Y3Z3 626 aaKnown RBP9.44□□□□□ -0.9
PTPRA-202ENST00000318266 FAM172BPA6NC97 362 aa9.44□□□□□ -0.9
PTPRA-202ENST00000318266 E5RI56 91 aa9.44□□□□□ -0.9
PTPRA-202ENST00000318266 LOC110117498-PIK3R3F6TDL0 507 aa9.44□□□□□ -0.9
PTPRA-202ENST00000318266 SEC22BO75396 215 aa9.44□□□□□ -0.9
PTPRA-202ENST00000318266 CYP2C18P33260 490 aa9.44□□□□□ -0.9
PTPRA-202ENST00000318266 HSPA7P48741 367 aa9.44□□□□□ -0.9
PTPRA-202ENST00000318266 RPP38P78345 283 aaKnown RBP9.44□□□□□ -0.9
PTPRA-202ENST00000318266 RFX4Q33E94 735 aa9.44□□□□□ -0.9
PTPRA-202ENST00000318266 PIK3R6Q5UE93 754 aa9.44□□□□□ -0.9
PTPRA-202ENST00000318266 MOB2Q70IA6 237 aa9.44□□□□□ -0.9
PTPRA-202ENST00000318266 HORMAD1Q86X24 394 aa9.44□□□□□ -0.9
PTPRA-202ENST00000318266 PIANPQ8IYJ0 282 aa9.44□□□□□ -0.9
PTPRA-202ENST00000318266 CHPFQ8IZ52 775 aa9.44□□□□□ -0.9
PTPRA-202ENST00000318266 ZNF566Q969W8 418 aa9.44□□□□□ -0.9
PTPRA-202ENST00000318266 PYURFQ96I23 114 aa9.44□□□□□ -0.9
PTPRA-202ENST00000318266 CEP19Q96LK0 163 aa9.44□□□□□ -0.9
PTPRA-202ENST00000318266 KCNC2Q96PR1 638 aa9.44□□□□□ -0.9
PTPRA-202ENST00000318266 INPP5KQ9BT40 448 aa9.44□□□□□ -0.9
PTPRA-202ENST00000318266 TRMT6Q9UJA5 497 aaKnown RBP9.44□□□□□ -0.9
PTPRA-202ENST00000318266 KRT87PA6NCN2 255 aa9.43□□□□□ -0.9
PTPRA-202ENST00000318266 M0R082 166 aa9.43□□□□□ -0.9
PTPRA-202ENST00000318266 ARNTLO00327 626 aa9.43□□□□□ -0.9
PTPRA-202ENST00000318266 WBP4O75554 376 aaKnown RBP9.43□□□□□ -0.9
PTPRA-202ENST00000318266 SCELO95171 688 aa9.43□□□□□ -0.9
PTPRA-202ENST00000318266 JUNDP17535 347 aa9.43□□□□□ -0.9
PTPRA-202ENST00000318266 EFNA1P20827 205 aaPredicted RBP9.43□□□□□ -0.9
PTPRA-202ENST00000318266 HTR3AP46098 478 aa9.43□□□□□ -0.9
PTPRA-202ENST00000318266 IDH2P48735 452 aaKnown RBP9.43□□□□□ -0.9
PTPRA-202ENST00000318266 ZNF135P52742 658 aaPredicted RBP9.43□□□□□ -0.9
PTPRA-202ENST00000318266 PNCKQ6P2M8 343 aa9.43□□□□□ -0.9
PTPRA-202ENST00000318266 NEK5Q6P3R8 708 aa9.43□□□□□ -0.9
PTPRA-202ENST00000318266 PRSS48Q7RTY5 328 aa9.43□□□□□ -0.9
PTPRA-202ENST00000318266 LIMS2Q7Z4I7 341 aa9.43□□□□□ -0.9
PTPRA-202ENST00000318266 SCN4BQ8IWT1 228 aa9.43□□□□□ -0.9
PTPRA-202ENST00000318266 PPTC7Q8NI37 304 aa9.43□□□□□ -0.9
PTPRA-202ENST00000318266 ARRDC2Q8TBH0 407 aa9.43□□□□□ -0.9
PTPRA-202ENST00000318266 CCDC115Q96NT0 180 aa9.43□□□□□ -0.9
PTPRA-202ENST00000318266 NECTIN4Q96NY8 510 aa9.43□□□□□ -0.9
PTPRA-202ENST00000318266 BCL7BQ9BQE9 202 aa9.43□□□□□ -0.9
PTPRA-202ENST00000318266 APOL5Q9BWW9 433 aa9.43□□□□□ -0.9
PTPRA-202ENST00000318266 IRF2BPLQ9H1B7 796 aa9.43□□□□□ -0.9
PTPRA-202ENST00000318266 IPPKQ9H8X2 491 aa9.43□□□□□ -0.9
PTPRA-202ENST00000318266 HEBP1Q9NRV9 189 aa9.43□□□□□ -0.9
PTPRA-202ENST00000318266 SIRT5Q9NXA8 310 aa9.43□□□□□ -0.9
PTPRA-202ENST00000318266 DKK3Q9UBP4 350 aa9.43□□□□□ -0.9
PTPRA-202ENST00000318266 MOSPD1Q9UJG1 213 aa9.43□□□□□ -0.9
PTPRA-202ENST00000318266 BTBD3Q9Y2F9 522 aa9.43□□□□□ -0.9
PTPRA-202ENST00000318266 DNAJC25-GNG10A0A024R161 153 aa9.43□□□□□ -0.9
PTPRA-202ENST00000318266 ITGAMP11215 1152 aa9.43□□□□□ -0.9
PTPRA-202ENST00000318266 KCNE1P15382 129 aa9.43□□□□□ -0.9
PTPRA-202ENST00000318266 HOXA9P31269 272 aa9.43□□□□□ -0.9
PTPRA-202ENST00000318266 ACVRL1P37023 503 aa9.43□□□□□ -0.9
PTPRA-202ENST00000318266 PPP3CCP48454 512 aa9.43□□□□□ -0.9
PTPRA-202ENST00000318266 SUOXP51687 545 aa9.43□□□□□ -0.9
PTPRA-202ENST00000318266 SLC14A1Q13336 389 aa9.43□□□□□ -0.9
PTPRA-202ENST00000318266 IL18R1Q13478 541 aa9.43□□□□□ -0.9
PTPRA-202ENST00000318266 DDR2Q16832 855 aa9.43□□□□□ -0.9
PTPRA-202ENST00000318266 LRRC26Q2I0M4 334 aa9.43□□□□□ -0.9
PTPRA-202ENST00000318266 TBRG1Q3YBR2 411 aa9.43□□□□□ -0.9
PTPRA-202ENST00000318266 UBXN11Q5T124 520 aa9.43□□□□□ -0.9
PTPRA-202ENST00000318266 ZNF648Q5T619 568 aaPredicted RBP9.43□□□□□ -0.9
PTPRA-202ENST00000318266 OR2T5Q6IEZ7 315 aa9.43□□□□□ -0.9
PTPRA-202ENST00000318266 CAPN13Q6MZZ7 669 aaPredicted RBP9.43□□□□□ -0.9
PTPRA-202ENST00000318266 PSAPL1Q6NUJ1 521 aa9.43□□□□□ -0.9
PTPRA-202ENST00000318266 TAPT1Q6NXT6 567 aa9.43□□□□□ -0.9
PTPRA-202ENST00000318266 SHQ1Q6PI26 577 aaKnown RBP9.43□□□□□ -0.9
PTPRA-202ENST00000318266 GOLGA7Q7Z5G4 137 aa9.43□□□□□ -0.9
PTPRA-202ENST00000318266 GPR149Q86SP6 731 aa9.43□□□□□ -0.9
PTPRA-202ENST00000318266 MIB1Q86YT6 1006 aa9.43□□□□□ -0.9
PTPRA-202ENST00000318266 AADATQ8N5Z0 425 aa9.43□□□□□ -0.9
PTPRA-202ENST00000318266 EFHBQ8N7U6 833 aa9.43□□□□□ -0.9
PTPRA-202ENST00000318266 OR2T29Q8NH02 315 aa9.43□□□□□ -0.9
PTPRA-202ENST00000318266 TPD52L3Q96J77 140 aa9.43□□□□□ -0.9
PTPRA-202ENST00000318266 PPP1R2P1Q96PQ5 205 aa9.43□□□□□ -0.9
PTPRA-202ENST00000318266 NSUN3Q9H649 340 aaKnown RBP9.43□□□□□ -0.9
PTPRA-202ENST00000318266 NMUR1Q9HB89 426 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms