RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 IPPKQ9H8X2 491 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 PTGDR2Q9Y5Y4 395 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 EBLN1P0CF75 366 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 CYP2A7P20853 494 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 HLA-DMAP28067 261 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 KIR3DL1P43629 444 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 DGKQP52824 942 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 CLDN8P56748 225 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 SRSF11Q05519 484 aaKnown RBP4.67□□□□□ -1.66
PTPN13-201ENST00000316707 ARHGAP1Q07960 439 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 TARDBPQ13148 414 aaKnown RBP eCLIP4.67□□□□□ -1.66
PTPN13-201ENST00000316707 MFSD10Q14728 455 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 YIF1BQ5BJH7 314 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 LRRC66Q68CR7 880 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 GATAD2AQ86YP4 633 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 FBXO16Q8IX29 292 aaPredicted RBP4.67□□□□□ -1.66
PTPN13-201ENST00000316707 FAM109AQ8N4B1 249 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 ARRDC4Q8NCT1 418 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 TESCQ96BS2 214 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 SEMA3CQ99985 751 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 CPPED1Q9BRF8 314 aaPredicted RBP4.67□□□□□ -1.66
PTPN13-201ENST00000316707 ZBED2Q9BTP6 218 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 TBCDQ9BTW9 1192 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 BBS2Q9BXC9 721 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 GABARAPL3Q9BY60 117 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 TRIM8Q9BZR9 551 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 HACL1Q9UJ83 578 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 PRELID1Q9Y255 219 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 A8MU76 341 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 CCRL2O00421 344 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 PDPK1O15530 556 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 CDK1P06493 297 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 IL7P13232 177 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 EPB42P16452 691 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 GADD45AP24522 165 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 RPS14P62263 151 aaKnown RBP4.67□□□□□ -1.66
PTPN13-201ENST00000316707 TSPY1Q01534 308 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 PCDH1Q08174 1060 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 SERINC3Q13530 473 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 SPANXN4Q5MJ08 99 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 C14orf80Q86SX3 495 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 SLC44A2Q8IWA5 706 aaPredicted RBP4.67□□□□□ -1.66
PTPN13-201ENST00000316707 ELMOD2Q8IZ81 293 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 LSM14AQ8ND56 463 aaKnown RBP4.67□□□□□ -1.66
PTPN13-201ENST00000316707 NDRG1Q92597 394 aaKnown RBP4.67□□□□□ -1.66
PTPN13-201ENST00000316707 METTL2AQ96IZ6 378 aaKnown RBP4.67□□□□□ -1.66
PTPN13-201ENST00000316707 FRMD6Q96NE9 622 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 LPIN3Q9BQK8 851 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 CHCHD6Q9BRQ6 235 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 ZNF556Q9HAH1 456 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 NLE1Q9NVX2 485 aaPredicted RBP4.67□□□□□ -1.66
PTPN13-201ENST00000316707 TOR4AQ9NXH8 423 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 LOC100506127A0A0U1RQW1 187 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 CDC7O00311 574 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 MITFO75030 526 aaPredicted RBP4.67□□□□□ -1.66
PTPN13-201ENST00000316707 GLUD1P00367 558 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 ABCB1P08183 1280 aaPredicted RBP4.67□□□□□ -1.66
PTPN13-201ENST00000316707 ACPPP15309 386 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 TGFBR2P37173 567 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 GZMKP49863 264 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 GPR50Q13585 617 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 TEAD4Q15561 434 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 MZT2BQ6NZ67 158 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 CREB3L2Q70SY1 520 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 PIM3Q86V86 326 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 SNX29P2Q8IUI4 249 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 MICALL2Q8IY33 904 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 OR8H2Q8N162 312 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 CSGALNACT1Q8TDX6 532 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 AP3S1Q92572 193 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 FAM83DQ9H4H8 585 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 THUMPD1Q9NXG2 353 aaKnown RBP4.67□□□□□ -1.66
PTPN13-201ENST00000316707 ING3Q9NXR8 418 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 POFUT2Q9Y2G5 429 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 PCDHB5Q9Y5E4 795 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 E9PAM4 449 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 ATXN1LP0C7T5 689 aaKnown RBP4.66□□□□□ -1.66
PTPN13-201ENST00000316707 PSMA3P25788 255 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 CA5AP35218 305 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 CLK3P49761 638 aaKnown RBP4.66□□□□□ -1.66
PTPN13-201ENST00000316707 NKX2-5P52952 324 aaPredicted RBP4.66□□□□□ -1.66
PTPN13-201ENST00000316707 SLC10A7Q0GE19 358 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 TBRG1Q3YBR2 411 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 VWA5B2Q8N398 1253 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 ENKURQ8TC29 256 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 PCED1BQ96HM7 432 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 C8orf48Q96LL4 319 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 TEX37Q96LM6 180 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 CLMPQ9H6B4 373 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 C12orf10Q9HB07 376 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 EXOSC4Q9NPD3 245 aaKnown RBP4.66□□□□□ -1.66
PTPN13-201ENST00000316707 TRMT13Q9NUP7 481 aaKnown RBP4.66□□□□□ -1.66
PTPN13-201ENST00000316707 TMEM248Q9NWD8 314 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.66□□□□□ -1.66
PTPN13-201ENST00000316707 SNX7Q9UNH6 387 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 FAM50BQ9Y247 325 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 NPIPB8E9PQR5 432 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 SUV39H1O43463 412 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 HCN1O60741 890 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 BEST1O76090 585 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms