RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 S100A1P23297 94 aa16.81■□□□□ 0.28
SCAMP4-201ENST00000316097 GKP32189 559 aa16.81■□□□□ 0.28
SCAMP4-201ENST00000316097 ISL1P61371 349 aa16.81■□□□□ 0.28
SCAMP4-201ENST00000316097 PPP2R2BQ00005 443 aa16.81■□□□□ 0.28
SCAMP4-201ENST00000316097 EPS8Q12929 822 aa16.81■□□□□ 0.28
SCAMP4-201ENST00000316097 TOP3AQ13472 1001 aaPredicted RBP16.81■□□□□ 0.28
SCAMP4-201ENST00000316097 SF3B4Q15427 424 aaKnown RBP eCLIP16.81■□□□□ 0.284e-9■■■■□ 22.2
SCAMP4-201ENST00000316097 PLA2G4EQ3MJ16 856 aa16.81■□□□□ 0.28
SCAMP4-201ENST00000316097 CMTM8Q8IZV2 173 aa16.81■□□□□ 0.28
SCAMP4-201ENST00000316097 RHEBL1Q8TAI7 183 aa16.81■□□□□ 0.28
SCAMP4-201ENST00000316097 CNIH3Q8TBE1 160 aa16.81■□□□□ 0.28
SCAMP4-201ENST00000316097 MYLIPQ8WY64 445 aa16.81■□□□□ 0.28
SCAMP4-201ENST00000316097 ING5Q8WYH8 240 aa16.81■□□□□ 0.28
SCAMP4-201ENST00000316097 ZSWIM3Q96MP5 696 aa16.81■□□□□ 0.28
SCAMP4-201ENST00000316097 ZNF599Q96NL3 588 aa16.81■□□□□ 0.28
SCAMP4-201ENST00000316097 EHD1Q9H4M9 534 aa16.81■□□□□ 0.28
SCAMP4-201ENST00000316097 FNDC3AQ9Y2H6 1198 aaKnown RBP16.81■□□□□ 0.28
SCAMP4-201ENST00000316097 SPO11Q9Y5K1 396 aa16.81■□□□□ 0.28
SCAMP4-201ENST00000316097 PMF1-BGLAPU3KQ54 211 aa16.81■□□□□ 0.28
SCAMP4-201ENST00000316097 TRAV19A0A0A6YYK7 116 aa16.8■□□□□ 0.28
SCAMP4-201ENST00000316097 LOC100130705A0A1B0GUX0 176 aa16.8■□□□□ 0.28
SCAMP4-201ENST00000316097 INSIG1O15503 277 aa16.8■□□□□ 0.28
SCAMP4-201ENST00000316097 CHEK2O96017 543 aa16.8■□□□□ 0.28
SCAMP4-201ENST00000316097 GGT1P19440 569 aa16.8■□□□□ 0.28
SCAMP4-201ENST00000316097 PRKACGP22612 351 aa16.8■□□□□ 0.28
SCAMP4-201ENST00000316097 ERVK-8P63133 956 aa16.8■□□□□ 0.28
SCAMP4-201ENST00000316097 PRKG2Q13237 762 aa16.8■□□□□ 0.28
SCAMP4-201ENST00000316097 NKG7Q16617 165 aa16.8■□□□□ 0.28
SCAMP4-201ENST00000316097 XKR7Q5GH72 579 aa16.8■□□□□ 0.28
SCAMP4-201ENST00000316097 UGT3A1Q6NUS8 523 aa16.8■□□□□ 0.28
SCAMP4-201ENST00000316097 DLEU7Q6UYE1 221 aa16.8■□□□□ 0.28
SCAMP4-201ENST00000316097 ZFAND4Q86XD8 727 aa16.8■□□□□ 0.28
SCAMP4-201ENST00000316097 OR6Q1Q8NGQ2 317 aa16.8■□□□□ 0.28
SCAMP4-201ENST00000316097 CTRCQ99895 268 aa16.8■□□□□ 0.28
SCAMP4-201ENST00000316097 HGH1Q9BTY7 390 aa16.8■□□□□ 0.28
SCAMP4-201ENST00000316097 TFB2MQ9H5Q4 396 aaKnown RBP16.8■□□□□ 0.28
SCAMP4-201ENST00000316097 RMND5AQ9H871 391 aa16.8■□□□□ 0.28
SCAMP4-201ENST00000316097 FBXO8Q9NRD0 319 aa16.8■□□□□ 0.28
SCAMP4-201ENST00000316097 DNAJB9Q9UBS3 223 aa16.8■□□□□ 0.28
SCAMP4-201ENST00000316097 IRAK3Q9Y616 596 aa16.8■□□□□ 0.28
SCAMP4-201ENST00000316097 MIA3Q5JRA6 1907 aa16.8■□□□□ 0.28
SCAMP4-201ENST00000316097 TRANK1O15050 2925 aa16.8■□□□□ 0.28
SCAMP4-201ENST00000316097 MROH6A6NGR9 719 aa16.8■□□□□ 0.28
SCAMP4-201ENST00000316097 MOSPD3O75425 235 aa16.8■□□□□ 0.28
SCAMP4-201ENST00000316097 DNAJB5O75953 348 aa16.8■□□□□ 0.28
SCAMP4-201ENST00000316097 PRLP01236 227 aa16.8■□□□□ 0.28
SCAMP4-201ENST00000316097 CD70P32970 193 aa16.8■□□□□ 0.28
SCAMP4-201ENST00000316097 SERPINB10P48595 397 aa16.8■□□□□ 0.28
SCAMP4-201ENST00000316097 AGTR2P50052 363 aa16.8■□□□□ 0.28
SCAMP4-201ENST00000316097 SEMA3AQ14563 771 aa16.8■□□□□ 0.28
SCAMP4-201ENST00000316097 ATP6AP1LQ52LC2 224 aa16.8■□□□□ 0.28
SCAMP4-201ENST00000316097 NANOGNBQ7Z5D8 188 aa16.8■□□□□ 0.28
SCAMP4-201ENST00000316097 HJURPQ8NCD3 748 aaPredicted RBP16.8■□□□□ 0.28
SCAMP4-201ENST00000316097 PJA1Q8NG27 643 aa16.8■□□□□ 0.28
SCAMP4-201ENST00000316097 RORBQ92753 470 aa16.8■□□□□ 0.28
SCAMP4-201ENST00000316097 ESAMQ96AP7 390 aa16.8■□□□□ 0.28
SCAMP4-201ENST00000316097 LINC00597Q9H2U6 94 aa16.8■□□□□ 0.28
SCAMP4-201ENST00000316097 ZIM2Q9NZV7 527 aa16.8■□□□□ 0.28
SCAMP4-201ENST00000316097 LIMD1Q9UGP4 676 aa16.8■□□□□ 0.28
SCAMP4-201ENST00000316097 ZNF225Q9UK10 706 aa16.8■□□□□ 0.28
SCAMP4-201ENST00000316097 LSM7Q9UK45 103 aaKnown RBP16.8■□□□□ 0.28
SCAMP4-201ENST00000316097 IKZF3Q9UKT9 509 aa16.8■□□□□ 0.28
SCAMP4-201ENST00000316097 NAALAD2Q9Y3Q0 740 aa16.8■□□□□ 0.28
SCAMP4-201ENST00000316097 OR51B4Q9Y5P0 310 aa16.8■□□□□ 0.28
SCAMP4-201ENST00000316097 GFRA2O00451 464 aa16.79■□□□□ 0.28
SCAMP4-201ENST00000316097 KERAO60938 352 aa16.79■□□□□ 0.28
SCAMP4-201ENST00000316097 GLP2RO95838 553 aa16.79■□□□□ 0.28
SCAMP4-201ENST00000316097 GOT2P00505 430 aaKnown RBP16.79■□□□□ 0.28
SCAMP4-201ENST00000316097 RHOP08100 348 aa16.79■□□□□ 0.28
SCAMP4-201ENST00000316097 CR2P20023 1033 aa16.79■□□□□ 0.28
SCAMP4-201ENST00000316097 SERPINB1P30740 379 aa16.79■□□□□ 0.28
SCAMP4-201ENST00000316097 MAP2K4P45985 399 aa16.79■□□□□ 0.28
SCAMP4-201ENST00000316097 ILF2Q12905 390 aaKnown RBP16.79■□□□□ 0.28
SCAMP4-201ENST00000316097 RBBP7Q16576 425 aa16.79■□□□□ 0.28
SCAMP4-201ENST00000316097 GRASPQ7Z6J2 395 aaPredicted RBP16.79■□□□□ 0.28
SCAMP4-201ENST00000316097 GPR65Q8IYL9 337 aa16.79■□□□□ 0.28
SCAMP4-201ENST00000316097 C12orf76Q8N812 135 aaPredicted RBP16.79■□□□□ 0.28
SCAMP4-201ENST00000316097 FRS2Q8WU20 508 aa16.79■□□□□ 0.28
SCAMP4-201ENST00000316097 ALG14Q96F25 216 aa16.79■□□□□ 0.28
SCAMP4-201ENST00000316097 CGREF1Q99674 301 aa16.79■□□□□ 0.28
SCAMP4-201ENST00000316097 RBM4BQ9BQ04 359 aaKnown RBP16.79■□□□□ 0.28
SCAMP4-201ENST00000316097 RBM4Q9BWF3 364 aaKnown RBP16.79■□□□□ 0.28
SCAMP4-201ENST00000316097 UGT2B28Q9BY64 529 aa16.79■□□□□ 0.28
SCAMP4-201ENST00000316097 TPK1Q9H3S4 243 aa16.79■□□□□ 0.28
SCAMP4-201ENST00000316097 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.79■□□□□ 0.282e-7■■■□□ 16.7
SCAMP4-201ENST00000316097 MAFFQ9ULX9 164 aa16.79■□□□□ 0.28
SCAMP4-201ENST00000316097 FAM50BQ9Y247 325 aa16.79■□□□□ 0.28
SCAMP4-201ENST00000316097 LSM1O15116 133 aaKnown RBP16.79■□□□□ 0.28
SCAMP4-201ENST00000316097 ECI2O75521 394 aa16.79■□□□□ 0.28
SCAMP4-201ENST00000316097 MRPL19P49406 292 aaKnown RBP16.79■□□□□ 0.28
SCAMP4-201ENST00000316097 DGKQP52824 942 aa16.79■□□□□ 0.28
SCAMP4-201ENST00000316097 NCS1P62166 190 aa16.79■□□□□ 0.28
SCAMP4-201ENST00000316097 SLC7A9P82251 487 aa16.79■□□□□ 0.28
SCAMP4-201ENST00000316097 IL5RAQ01344 420 aa16.79■□□□□ 0.28
SCAMP4-201ENST00000316097 SLC13A2Q13183 592 aa16.79■□□□□ 0.28
SCAMP4-201ENST00000316097 DGCR6Q14129 220 aa16.79■□□□□ 0.28
SCAMP4-201ENST00000316097 TSNQ15631 228 aaKnown RBP16.79■□□□□ 0.28
SCAMP4-201ENST00000316097 HIST2H2ACQ16777 129 aaPredicted RBP16.79■□□□□ 0.28
SCAMP4-201ENST00000316097 C6orf136Q5SQH8 315 aa16.79■□□□□ 0.28
SCAMP4-201ENST00000316097 CCDC81Q6ZN84 652 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms