RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 RBM4Q9BWF3 364 aaKnown RBP12.39□□□□□ -0.43
RETREG3-201ENST00000309428 MAF1Q9H063 256 aa12.39□□□□□ -0.43
RETREG3-201ENST00000309428 RBM38Q9H0Z9 239 aaKnown RBP12.39□□□□□ -0.43
RETREG3-201ENST00000309428 DUS2Q9NX74 493 aaKnown RBP12.39□□□□□ -0.43
RETREG3-201ENST00000309428 TESMINQ9Y4I5 508 aa12.39□□□□□ -0.43
RETREG3-201ENST00000309428 A0A0C4DFX4 3053 aa12.39□□□□□ -0.43
RETREG3-201ENST00000309428 KPNA5O15131 536 aa12.39□□□□□ -0.43
RETREG3-201ENST00000309428 SLC22A2O15244 555 aa12.39□□□□□ -0.43
RETREG3-201ENST00000309428 TMCC2O75069 709 aa12.39□□□□□ -0.43
RETREG3-201ENST00000309428 ZNF623O75123 536 aa12.39□□□□□ -0.43
RETREG3-201ENST00000309428 SNX4O95219 450 aa12.39□□□□□ -0.43
RETREG3-201ENST00000309428 ATXN1LP0C7T5 689 aaKnown RBP12.39□□□□□ -0.43
RETREG3-201ENST00000309428 PABPC1P11940 636 aaKnown RBP12.39□□□□□ -0.43
RETREG3-201ENST00000309428 FSHRP23945 695 aa12.39□□□□□ -0.43
RETREG3-201ENST00000309428 ADRA1AP35348 466 aa12.39□□□□□ -0.43
RETREG3-201ENST00000309428 ALDH3A2P51648 485 aa12.39□□□□□ -0.43
RETREG3-201ENST00000309428 CD83Q01151 205 aa12.39□□□□□ -0.43
RETREG3-201ENST00000309428 BCL2L1Q07817 233 aa12.39□□□□□ -0.43
RETREG3-201ENST00000309428 SMN1Q16637 294 aaKnown RBP12.39□□□□□ -0.43
RETREG3-201ENST00000309428 BORAQ6PGQ7 559 aa12.39□□□□□ -0.43
RETREG3-201ENST00000309428 C11orf96Q7Z7L8 435 aa12.39□□□□□ -0.43
RETREG3-201ENST00000309428 TTC29Q8NA56 475 aaPredicted RBP12.39□□□□□ -0.43
RETREG3-201ENST00000309428 ZNF420Q8TAQ5 688 aaPredicted RBP12.39□□□□□ -0.43
RETREG3-201ENST00000309428 SCAMP4Q969E2 229 aa12.39□□□□□ -0.43
RETREG3-201ENST00000309428 PANX1Q96RD7 426 aa12.39□□□□□ -0.43
RETREG3-201ENST00000309428 TTYH2Q9BSA4 534 aa12.39□□□□□ -0.43
RETREG3-201ENST00000309428 OPTCQ9UBM4 332 aa12.39□□□□□ -0.43
RETREG3-201ENST00000309428 ITGB1BP2Q9UKP3 347 aa12.39□□□□□ -0.43
RETREG3-201ENST00000309428 HNRNPCL2B2RXH8 293 aa12.38□□□□□ -0.43
RETREG3-201ENST00000309428 ANKRD66B4E2M5 251 aa12.38□□□□□ -0.43
RETREG3-201ENST00000309428 CCL16O15467 120 aa12.38□□□□□ -0.43
RETREG3-201ENST00000309428 AP1G1O43747 822 aa12.38□□□□□ -0.43
RETREG3-201ENST00000309428 COQ9O75208 318 aa12.38□□□□□ -0.43
RETREG3-201ENST00000309428 C8BP07358 591 aa12.38□□□□□ -0.43
RETREG3-201ENST00000309428 IDUAP35475 653 aa12.38□□□□□ -0.43
RETREG3-201ENST00000309428 ZXDBP98169 803 aa12.38□□□□□ -0.43
RETREG3-201ENST00000309428 CYP27C1Q4G0S4 372 aa12.38□□□□□ -0.43
RETREG3-201ENST00000309428 TJAP1Q5JTD0 557 aa12.38□□□□□ -0.43
RETREG3-201ENST00000309428 SPANXN4Q5MJ08 99 aa12.38□□□□□ -0.43
RETREG3-201ENST00000309428 LSRQ86X29 649 aaPredicted RBP12.38□□□□□ -0.43
RETREG3-201ENST00000309428 TMEM126BQ8IUX1 230 aa12.38□□□□□ -0.43
RETREG3-201ENST00000309428 SLC22A17Q8WUG5 538 aa12.38□□□□□ -0.43
RETREG3-201ENST00000309428 KAT8Q9H7Z6 458 aaKnown RBP12.38□□□□□ -0.43
RETREG3-201ENST00000309428 CERS4Q9HA82 394 aa12.38□□□□□ -0.43
RETREG3-201ENST00000309428 CLEC4EQ9ULY5 219 aa12.38□□□□□ -0.43
RETREG3-201ENST00000309428 PSME4Q14997 1843 aa12.38□□□□□ -0.43
RETREG3-201ENST00000309428 RFXANKO14593 260 aa12.38□□□□□ -0.43
RETREG3-201ENST00000309428 MT-ND2P03891 347 aa12.38□□□□□ -0.43
RETREG3-201ENST00000309428 OPN1SWP03999 348 aa12.38□□□□□ -0.43
RETREG3-201ENST00000309428 SERPIND1P05546 499 aa12.38□□□□□ -0.43
RETREG3-201ENST00000309428 LCKP06239 509 aa12.38□□□□□ -0.43
RETREG3-201ENST00000309428 TGFBR1P36897 503 aa12.38□□□□□ -0.43
RETREG3-201ENST00000309428 HNF4AP41235 474 aa12.38□□□□□ -0.43
RETREG3-201ENST00000309428 LEPRP48357 1165 aaKnown RBP12.38□□□□□ -0.43
RETREG3-201ENST00000309428 SKIV2LQ15477 1246 aaKnown RBP12.38□□□□□ -0.43
RETREG3-201ENST00000309428 KLHL17Q6TDP4 642 aa12.38□□□□□ -0.43
RETREG3-201ENST00000309428 SPATC1Q76KD6 591 aa12.38□□□□□ -0.43
RETREG3-201ENST00000309428 DNAJB7Q7Z6W7 309 aaPredicted RBP12.38□□□□□ -0.43
RETREG3-201ENST00000309428 PROSER1Q86XN7 944 aa12.38□□□□□ -0.43
RETREG3-201ENST00000309428 UMODL1-AS1Q8N2C9 162 aa12.38□□□□□ -0.43
RETREG3-201ENST00000309428 ENKURQ8TC29 256 aa12.38□□□□□ -0.43
RETREG3-201ENST00000309428 MYRFLQ96LU7 910 aa12.38□□□□□ -0.43
RETREG3-201ENST00000309428 MFSD1Q9H3U5 465 aa12.38□□□□□ -0.43
RETREG3-201ENST00000309428 TMEM248Q9NWD8 314 aa12.38□□□□□ -0.43
RETREG3-201ENST00000309428 TUBA8Q9NY65 449 aaPredicted RBP12.38□□□□□ -0.43
RETREG3-201ENST00000309428 TBC1D14Q9P2M4 693 aa12.38□□□□□ -0.43
RETREG3-201ENST00000309428 RGPD3A6NKT7 1758 aaPredicted RBP12.38□□□□□ -0.43
RETREG3-201ENST00000309428 RGPD4Q7Z3J3 1758 aa12.38□□□□□ -0.43
RETREG3-201ENST00000309428 TCRBV3S1A0A5B6 114 aa12.38□□□□□ -0.43
RETREG3-201ENST00000309428 PCP4L1A6NKN8 68 aa12.38□□□□□ -0.43
RETREG3-201ENST00000309428 NEDD8-MDP1E9PL57 170 aa12.38□□□□□ -0.43
RETREG3-201ENST00000309428 PRAMEF11O60813 436 aa12.38□□□□□ -0.43
RETREG3-201ENST00000309428 CDH1P12830 882 aa12.38□□□□□ -0.43
RETREG3-201ENST00000309428 SELPP16109 830 aa12.38□□□□□ -0.43
RETREG3-201ENST00000309428 IL12RB1P42701 662 aa12.38□□□□□ -0.43
RETREG3-201ENST00000309428 POLD2P49005 469 aa12.38□□□□□ -0.43
RETREG3-201ENST00000309428 ZC3H12BQ5HYM0 836 aaKnown RBP12.38□□□□□ -0.43
RETREG3-201ENST00000309428 NEK5Q6P3R8 708 aa12.38□□□□□ -0.43
RETREG3-201ENST00000309428 PRR23CQ6ZRP0 262 aa12.38□□□□□ -0.43
RETREG3-201ENST00000309428 HID1Q8IV36 788 aa12.38□□□□□ -0.43
RETREG3-201ENST00000309428 PGAP3Q96FM1 320 aaPredicted RBP12.38□□□□□ -0.43
RETREG3-201ENST00000309428 SH3YL1Q96HL8 342 aaPredicted RBP12.38□□□□□ -0.43
RETREG3-201ENST00000309428 KCNC2Q96PR1 638 aa12.38□□□□□ -0.43
RETREG3-201ENST00000309428 AARSD1Q9BTE6 412 aaKnown RBP12.38□□□□□ -0.43
RETREG3-201ENST00000309428 INIPQ9NRY2 104 aa12.38□□□□□ -0.43
RETREG3-201ENST00000309428 SLCO3A1Q9UIG8 710 aa12.38□□□□□ -0.43
RETREG3-201ENST00000309428 PARP14Q460N5 1801 aa12.37□□□□□ -0.43
RETREG3-201ENST00000309428 SAP18O00422 153 aaKnown RBP12.37□□□□□ -0.43
RETREG3-201ENST00000309428 GLUD1P00367 558 aa12.37□□□□□ -0.43
RETREG3-201ENST00000309428 STATHP02808 62 aa12.37□□□□□ -0.43
RETREG3-201ENST00000309428 CTSOP43234 321 aaPredicted RBP12.37□□□□□ -0.43
RETREG3-201ENST00000309428 SMARCB1Q12824 385 aa12.37□□□□□ -0.43
RETREG3-201ENST00000309428 PARP15Q460N3 678 aa12.37□□□□□ -0.43
RETREG3-201ENST00000309428 INTS11Q5TA45 600 aaKnown RBP12.37□□□□□ -0.43
RETREG3-201ENST00000309428 CYP20A1Q6UW02 462 aa12.37□□□□□ -0.43
RETREG3-201ENST00000309428 CYS1Q717R9 158 aa12.37□□□□□ -0.43
RETREG3-201ENST00000309428 EPHX4Q8IUS5 362 aa12.37□□□□□ -0.43
RETREG3-201ENST00000309428 FUNDC1Q8IVP5 155 aa12.37□□□□□ -0.43
RETREG3-201ENST00000309428 DEPDC4Q8N2C3 294 aa12.37□□□□□ -0.43
RETREG3-201ENST00000309428 LIX1Q8N485 282 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms