RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 NPY5RQ15761 445 aa8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 TPRG1Q6ZUI0 275 aa8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 KLHDC9Q8NEP7 349 aa8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 SNX33Q8WV41 574 aa8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 TCEAL3Q969E4 200 aa8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 KCTD15Q96SI1 283 aaPredicted RBP8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 PAIP1Q9H074 479 aaKnown RBP8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 SPAG4Q9NPE6 437 aa8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 SLC33A1O00400 549 aaPredicted RBP8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 NR4A1P22736 598 aa8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 RGS8P57771 180 aaPredicted RBP8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 ARF3P61204 181 aaPredicted RBP8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 MRPS21P82921 87 aaKnown RBP8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 ARF1P84077 181 aaKnown RBP8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 DGCR6Q14129 220 aa8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 SLC14A2Q15849 920 aa8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 ZBTB6Q15916 424 aa8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 ERICH5Q6P6B1 374 aa8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 PGM2L1Q6PCE3 622 aa8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 RAB11FIP2Q7L804 512 aa8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 SLC43A3Q8NBI5 491 aa8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 ZNF540Q8NDQ6 660 aa8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 TMEM209Q96SK2 561 aa8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 TMEM121BQ9BXQ6 578 aaPredicted RBP8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 USP29Q9HBJ7 922 aa8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 FBXO9Q9UK97 447 aaPredicted RBP8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 RAP2CQ9Y3L5 183 aa8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 SLC31A1O15431 190 aa8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 B3GALT2O43825 422 aa8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 PIGNO95427 931 aa8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 LMO2P25791 158 aa8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 RABIFP47224 123 aa8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 ATP1A4Q13733 1029 aa8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 DNAJA4Q8WW22 397 aaPredicted RBP8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 S100ZQ8WXG8 99 aa8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 OR52E6Q96RD3 313 aa8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 DGCR6LQ9BY27 220 aa8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 EQTNQ9NQ60 294 aa8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 DNAJC28Q9NX36 388 aa8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 RDH8Q9NYR8 311 aa8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 SPIN1Q9Y657 262 aaPredicted RBP8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 NUDT17P0C025 328 aa8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 CAV3P56539 151 aa8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 EIF2S3LQ2VIR3 472 aaKnown RBP8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 ABCA11PQ4W5N1 156 aa8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 CYP2R1Q6VVX0 501 aa8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 ARHGAP36Q6ZRI8 547 aa8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 TMPRSS11BQ86T26 416 aa8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 CLVS1Q8IUQ0 354 aaPredicted RBP8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 BTBD10Q9BSF8 475 aa8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 MCOLN1Q9GZU1 580 aa8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 NOCTQ9UK39 431 aaKnown RBP8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 LEFTY2O00292 366 aa8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 BPNT1O95861 308 aa8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 ECHS1P30084 290 aa8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 RIN1Q13671 783 aa8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 MYLK3Q32MK0 819 aa8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 CADM2Q8N3J6 435 aa8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 TMEM145Q8NBT3 493 aa8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 CDRT15Q96T59 188 aa8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 WRAP53Q9BUR4 548 aaKnown RBP8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 EFCAB11Q9BUY7 163 aa8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 BPIFA1Q9NP55 256 aa8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 ATXN10Q9UBB4 475 aa8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 TMPRSS11EQ9UL52 423 aa8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 MED31Q9Y3C7 131 aa8.17□□□□□ -1.1
PCDHB1-201ENST00000306549 TPP1O14773 563 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 OR1I1O60431 355 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 BMP6P22004 513 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 CLDN10P78369 228 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 SLC13A2Q13183 592 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 FAM214AQ32MH5 1076 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 CST9Q5W186 159 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 SLC30A6Q6NXT4 461 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 MED27Q6P2C8 311 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 DNM1P34Q6PK57 102 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 SCIMPQ6UWF3 145 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 LNX1Q8TBB1 728 aaPredicted RBP8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 SPHK2Q9NRA0 654 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 PLOD3O60568 738 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 TRBC1P01850 177 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 RLN2P04090 185 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 RPL17P18621 184 aaKnown RBP8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 PTX3P26022 381 aaPredicted RBP8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 SSTR1P30872 391 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 TIE1P35590 1138 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 EIF5AP63241 154 aaKnown RBP8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 C15orf39Q6ZRI6 1047 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 ZNF567Q8N184 647 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 KLHL6Q8WZ60 621 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 PRRX2Q99811 253 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 RAB21Q9UL25 225 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 AHCTF1Q8WYP5 2266 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 TSPAN9O75954 239 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 WFS1O76024 890 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 CER1O95813 267 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 RENP00797 406 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 CSKP41240 450 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 GABRB2P47870 512 aa8.16□□□□□ -1.1
PCDHB1-201ENST00000306549 ACTR1AP61163 376 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms