RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 CD3EAPO15446 510 aaKnown RBP5.32□□□□□ -1.56
VPS50-202ENST00000305866 SEMA7AO75326 666 aa5.32□□□□□ -1.56
VPS50-202ENST00000305866 RFPL2O75678 378 aa5.32□□□□□ -1.56
VPS50-202ENST00000305866 SLC22A3O75751 556 aa5.32□□□□□ -1.56
VPS50-202ENST00000305866 BCL10O95999 233 aa5.32□□□□□ -1.56
VPS50-202ENST00000305866 ITGB1P05556 798 aa5.32□□□□□ -1.56
VPS50-202ENST00000305866 SERPINF2P08697 491 aa5.32□□□□□ -1.56
VPS50-202ENST00000305866 ITGB6P18564 788 aa5.32□□□□□ -1.56
VPS50-202ENST00000305866 EEF1DP29692 281 aaKnown RBP5.32□□□□□ -1.56
VPS50-202ENST00000305866 SSTR4P31391 388 aa5.32□□□□□ -1.56
VPS50-202ENST00000305866 MTHFRP42898 656 aa5.32□□□□□ -1.56
VPS50-202ENST00000305866 HTR3AP46098 478 aa5.32□□□□□ -1.56
VPS50-202ENST00000305866 GJA8P48165 433 aa5.32□□□□□ -1.56
VPS50-202ENST00000305866 NEK2P51955 445 aa5.32□□□□□ -1.56
VPS50-202ENST00000305866 PTPRRQ15256 657 aa5.32□□□□□ -1.56
VPS50-202ENST00000305866 SSX1Q16384 188 aa5.32□□□□□ -1.56
VPS50-202ENST00000305866 NDUFA5Q16718 116 aa5.32□□□□□ -1.56
VPS50-202ENST00000305866 ZIK1Q3SY52 487 aaPredicted RBP5.32□□□□□ -1.56
VPS50-202ENST00000305866 GLYR1Q49A26 553 aaPredicted RBP5.32□□□□□ -1.56
VPS50-202ENST00000305866 ZNF658BQ4V348 819 aaPredicted RBP5.32□□□□□ -1.56
VPS50-202ENST00000305866 INO80DQ53TQ3 878 aaPredicted RBP5.32□□□□□ -1.56
VPS50-202ENST00000305866 YIF1BQ5BJH7 314 aa5.32□□□□□ -1.56
VPS50-202ENST00000305866 ATXN7L2Q5T6C5 722 aaPredicted RBP5.32□□□□□ -1.56
VPS50-202ENST00000305866 MARC1Q5VT66 337 aa5.32□□□□□ -1.56
VPS50-202ENST00000305866 LAMTOR1Q6IAA8 161 aa5.32□□□□□ -1.56
VPS50-202ENST00000305866 TWF2Q6IBS0 349 aaKnown RBP5.32□□□□□ -1.56
VPS50-202ENST00000305866 KRT80Q6KB66 452 aa5.32□□□□□ -1.56
VPS50-202ENST00000305866 Q6ZNB5 142 aa5.32□□□□□ -1.56
VPS50-202ENST00000305866 SLC46A3Q7Z3Q1 461 aa5.32□□□□□ -1.56
VPS50-202ENST00000305866 SLC22A16Q86VW1 577 aa5.32□□□□□ -1.56
VPS50-202ENST00000305866 RALGPS2Q86X27 583 aaPredicted RBP5.32□□□□□ -1.56
VPS50-202ENST00000305866 LAS2Q8IYD9 372 aa5.32□□□□□ -1.56
VPS50-202ENST00000305866 ZCCHC7Q8N3Z6 543 aaKnown RBP5.32□□□□□ -1.56
VPS50-202ENST00000305866 NKAPQ8N5F7 415 aaKnown RBP5.32□□□□□ -1.56
VPS50-202ENST00000305866 OR13C4Q8NGS5 318 aa5.32□□□□□ -1.56
VPS50-202ENST00000305866 ATL1Q8WXF7 558 aa5.32□□□□□ -1.56
VPS50-202ENST00000305866 EDEM1Q92611 657 aa5.32□□□□□ -1.56
VPS50-202ENST00000305866 UPF1Q92900 1129 aaKnown RBP eCLIP5.32□□□□□ -1.56
VPS50-202ENST00000305866 SLC6A18Q96N87 628 aa5.32□□□□□ -1.56
VPS50-202ENST00000305866 TSNARE1Q96NA8 513 aa5.32□□□□□ -1.56
VPS50-202ENST00000305866 SYT17Q9BSW7 474 aa5.32□□□□□ -1.56
VPS50-202ENST00000305866 ATXN3LQ9H3M9 355 aa5.32□□□□□ -1.56
VPS50-202ENST00000305866 EHD1Q9H4M9 534 aa5.32□□□□□ -1.56
VPS50-202ENST00000305866 PARVBQ9HBI1 364 aa5.32□□□□□ -1.56
VPS50-202ENST00000305866 ZBTB20Q9HC78 741 aaPredicted RBP5.32□□□□□ -1.56
VPS50-202ENST00000305866 HPS4Q9NQG7 708 aa5.32□□□□□ -1.56
VPS50-202ENST00000305866 TAS2R13Q9NYV9 303 aa5.32□□□□□ -1.56
VPS50-202ENST00000305866 NUDT4Q9NZJ9 180 aa5.32□□□□□ -1.56
VPS50-202ENST00000305866 SCN5AQ14524 2016 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 ISPDA4D126 451 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.31□□□□□ -1.56
VPS50-202ENST00000305866 TAF4O00268 1085 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 PITPNM1O00562 1244 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 CAPN5O15484 640 aaPredicted RBP5.31□□□□□ -1.56
VPS50-202ENST00000305866 MYO1DO94832 1006 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 LDLRP01130 860 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 ALOX5P09917 674 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 PRKACGP22612 351 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 NR4A1P22736 598 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 TBX4P57082 545 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 KCNJ10P78508 379 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 TSPY1Q01534 308 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 TEKQ02763 1124 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 HYAL2Q12891 473 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 SEPT6Q14141 434 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 INPP5AQ14642 412 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 MBTPS1Q14703 1052 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 NXNQ6DKJ4 435 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 TUBA3EQ6PEY2 450 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 NCEH1Q6PIU2 408 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 NEK10Q6ZWH5 1172 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 NLRP8Q86W28 1048 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 METTL4Q8N3J2 472 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 CELF2-AS1Q8N7Q2 184 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 ZNF485Q8NCK3 441 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 STAG3L4Q8TBR4 150 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 LKAAEAR1Q8TD35 194 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 TBATAQ96M53 351 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 CASD1Q96PB1 797 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 KCTD14Q9BQ13 255 aaPredicted RBP5.31□□□□□ -1.56
VPS50-202ENST00000305866 NTMT1Q9BV86 223 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 POLR1EQ9GZS1 481 aaKnown RBP5.31□□□□□ -1.56
VPS50-202ENST00000305866 TP63Q9H3D4 680 aaPredicted RBP5.31□□□□□ -1.56
VPS50-202ENST00000305866 ANKHQ9HCJ1 492 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 MID1IP1Q9NPA3 183 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 CCDC59Q9P031 241 aaKnown RBP5.31□□□□□ -1.56
VPS50-202ENST00000305866 PSORS1C1Q9UIG5 152 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 PCDHGA2Q9Y5H1 932 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 CDH23Q9H251 3354 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 CKAP5Q14008 2032 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 SYCE1LA8MT33 242 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 TOR1BO14657 336 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 PRAMEF12O95522 483 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 HLA-DQB1P01920 261 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 MT-ND2P03891 347 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 PRKCAP17252 672 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 GRK3P35626 688 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 NR4A2P43354 598 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 DGKQP52824 942 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 BOP1Q14137 746 aaKnown RBP5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms