RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 TTC29Q8NA56 475 aaPredicted RBP13.74□□□□□ -0.21
SDC2-201ENST00000302190 TOP1MTQ969P6 601 aa13.74□□□□□ -0.21
SDC2-201ENST00000302190 CLIP3Q96DZ5 547 aa13.74□□□□□ -0.21
SDC2-201ENST00000302190 PGAP3Q96FM1 320 aaPredicted RBP13.74□□□□□ -0.21
SDC2-201ENST00000302190 MYRFLQ96LU7 910 aa13.74□□□□□ -0.21
SDC2-201ENST00000302190 DNAJB9Q9UBS3 223 aa13.74□□□□□ -0.21
SDC2-201ENST00000302190 NPTX1Q15818 432 aa13.73□□□□□ -0.21
SDC2-201ENST00000302190 SMUG1Q53HV7 270 aa13.73□□□□□ -0.21
SDC2-201ENST00000302190 RTP2Q5QGT7 225 aa13.73□□□□□ -0.21
SDC2-201ENST00000302190 ZNF697Q5TEC3 545 aa13.73□□□□□ -0.21
SDC2-201ENST00000302190 LHX8Q68G74 356 aa13.73□□□□□ -0.21
SDC2-201ENST00000302190 BEND7Q8N7W2 519 aaPredicted RBP13.73□□□□□ -0.21
SDC2-201ENST00000302190 OR5AK3PQ8NH89 298 aa13.73□□□□□ -0.21
SDC2-201ENST00000302190 ZNF599Q96NL3 588 aa13.73□□□□□ -0.21
SDC2-201ENST00000302190 KCNC2Q96PR1 638 aa13.73□□□□□ -0.21
SDC2-201ENST00000302190 TUBB1Q9H4B7 451 aa13.73□□□□□ -0.21
SDC2-201ENST00000302190 NUDT4Q9NZJ9 180 aa13.73□□□□□ -0.21
SDC2-201ENST00000302190 CARD8Q9Y2G2 431 aa13.73□□□□□ -0.21
SDC2-201ENST00000302190 HHLA1C9JL84 531 aa13.73□□□□□ -0.21
SDC2-201ENST00000302190 RAB41Q5JT25 222 aa13.73□□□□□ -0.21
SDC2-201ENST00000302190 P2RY8Q86VZ1 359 aa13.73□□□□□ -0.21
SDC2-201ENST00000302190 MDGA1Q8NFP4 955 aa13.73□□□□□ -0.21
SDC2-201ENST00000302190 ARRDC2Q8TBH0 407 aa13.73□□□□□ -0.21
SDC2-201ENST00000302190 TMEM125Q96AQ2 219 aa13.73□□□□□ -0.21
SDC2-201ENST00000302190 NACC2Q96BF6 587 aa13.73□□□□□ -0.21
SDC2-201ENST00000302190 CACYBPQ9HB71 228 aaKnown RBP13.73□□□□□ -0.21
SDC2-201ENST00000302190 CD320Q9NPF0 282 aa13.73□□□□□ -0.21
SDC2-201ENST00000302190 ITM2BQ9Y287 266 aa13.73□□□□□ -0.21
SDC2-201ENST00000302190 LOC100130705A0A1B0GUX0 176 aa13.73□□□□□ -0.21
SDC2-201ENST00000302190 SMIM30A4D0T7 59 aa13.73□□□□□ -0.21
SDC2-201ENST00000302190 ANKDD1BA6NHY2 528 aa13.73□□□□□ -0.21
SDC2-201ENST00000302190 CLDN25C9JDP6 229 aa13.73□□□□□ -0.21
SDC2-201ENST00000302190 HAS3O00219 553 aa13.73□□□□□ -0.21
SDC2-201ENST00000302190 ADAM23O75077 832 aa13.73□□□□□ -0.21
SDC2-201ENST00000302190 SLC11A1P49279 550 aa13.73□□□□□ -0.21
SDC2-201ENST00000302190 ST8SIA6P61647 398 aa13.73□□□□□ -0.21
SDC2-201ENST00000302190 MXD1Q05195 221 aa13.73□□□□□ -0.21
SDC2-201ENST00000302190 GANABQ14697 944 aaKnown RBP13.73□□□□□ -0.21
SDC2-201ENST00000302190 PHKG1Q16816 387 aa13.73□□□□□ -0.21
SDC2-201ENST00000302190 INO80DQ53TQ3 878 aaPredicted RBP13.73□□□□□ -0.21
SDC2-201ENST00000302190 USP45Q70EL2 814 aa13.73□□□□□ -0.21
SDC2-201ENST00000302190 IQCF2Q8IXL9 164 aa13.73□□□□□ -0.21
SDC2-201ENST00000302190 MINDY1Q8N5J2 469 aa13.73□□□□□ -0.21
SDC2-201ENST00000302190 STON2Q8WXE9 905 aa13.73□□□□□ -0.21
SDC2-201ENST00000302190 MYLIPQ8WY64 445 aa13.73□□□□□ -0.21
SDC2-201ENST00000302190 SGCDQ92629 289 aa13.73□□□□□ -0.21
SDC2-201ENST00000302190 UBXN10Q96LJ8 280 aa13.73□□□□□ -0.21
SDC2-201ENST00000302190 VPS35Q96QK1 796 aa13.73□□□□□ -0.21
SDC2-201ENST00000302190 ANKRD60Q9BZ19 345 aa13.73□□□□□ -0.21
SDC2-201ENST00000302190 GIN1Q9NXP7 522 aa13.73□□□□□ -0.21
SDC2-201ENST00000302190 EHD3Q9NZN3 535 aa13.73□□□□□ -0.21
SDC2-201ENST00000302190 TCRBV3S1A0A5B6 114 aa13.72□□□□□ -0.21
SDC2-201ENST00000302190 C2orf78A6NCI8 922 aa13.72□□□□□ -0.21
SDC2-201ENST00000302190 PSMD11O00231 422 aa13.72□□□□□ -0.21
SDC2-201ENST00000302190 CREG1O75629 220 aa13.72□□□□□ -0.21
SDC2-201ENST00000302190 INMTO95050 263 aa13.72□□□□□ -0.21
SDC2-201ENST00000302190 PAPSS2O95340 614 aaPredicted RBP13.72□□□□□ -0.21
SDC2-201ENST00000302190 GRK3P35626 688 aa13.72□□□□□ -0.21
SDC2-201ENST00000302190 OR1E2P47887 323 aa13.72□□□□□ -0.21
SDC2-201ENST00000302190 ALDH3A2P51648 485 aa13.72□□□□□ -0.21
SDC2-201ENST00000302190 LBX1P52954 281 aa13.72□□□□□ -0.21
SDC2-201ENST00000302190 CDH12P55289 794 aa13.72□□□□□ -0.21
SDC2-201ENST00000302190 USP41Q3LFD5 358 aa13.72□□□□□ -0.21
SDC2-201ENST00000302190 ZNF648Q5T619 568 aaPredicted RBP13.72□□□□□ -0.21
SDC2-201ENST00000302190 SERINC5Q86VE9 423 aa13.72□□□□□ -0.21
SDC2-201ENST00000302190 VANGL1Q8TAA9 524 aaPredicted RBP13.72□□□□□ -0.21
SDC2-201ENST00000302190 FUBP3Q96I24 572 aaKnown RBP eCLIP13.72□□□□□ -0.215e-13■■■□□ 18.9
SDC2-201ENST00000302190 YME1L1Q96TA2 773 aa13.72□□□□□ -0.21
SDC2-201ENST00000302190 PCTPQ9UKL6 214 aa13.72□□□□□ -0.21
SDC2-201ENST00000302190 ASB1Q9Y576 335 aa13.72□□□□□ -0.21
SDC2-201ENST00000302190 A0A1W2PQ45 241 aaPredicted RBP13.72□□□□□ -0.21
SDC2-201ENST00000302190 A0A1W2PQY0 241 aa13.72□□□□□ -0.21
SDC2-201ENST00000302190 NEDD8-MDP1E9PL57 170 aa13.72□□□□□ -0.21
SDC2-201ENST00000302190 H3BMQ9 156 aa13.72□□□□□ -0.21
SDC2-201ENST00000302190 C8BP07358 591 aa13.72□□□□□ -0.21
SDC2-201ENST00000302190 BMP2P12643 396 aa13.72□□□□□ -0.21
SDC2-201ENST00000302190 HTR7P34969 479 aa13.72□□□□□ -0.21
SDC2-201ENST00000302190 ADRA1AP35348 466 aa13.72□□□□□ -0.21
SDC2-201ENST00000302190 STK19P49842 368 aaPredicted RBP13.72□□□□□ -0.21
SDC2-201ENST00000302190 TPTEP56180 551 aa13.72□□□□□ -0.21
SDC2-201ENST00000302190 ADAM17P78536 824 aa13.72□□□□□ -0.21
SDC2-201ENST00000302190 ZNF33AQ06730 810 aa13.72□□□□□ -0.21
SDC2-201ENST00000302190 PTCHD3Q3KNS1 767 aa13.72□□□□□ -0.21
SDC2-201ENST00000302190 USP39Q53GS9 565 aaKnown RBP13.72□□□□□ -0.21
SDC2-201ENST00000302190 SPANXN2Q5MJ10 180 aa13.72□□□□□ -0.21
SDC2-201ENST00000302190 ADGRF1Q5T601 910 aa13.72□□□□□ -0.21
SDC2-201ENST00000302190 FAM171BQ6P995 826 aa13.72□□□□□ -0.21
SDC2-201ENST00000302190 VTCN1Q7Z7D3 282 aa13.72□□□□□ -0.21
SDC2-201ENST00000302190 ADGRG2Q8IZP9 1017 aa13.72□□□□□ -0.21
SDC2-201ENST00000302190 SLC15A4Q8N697 577 aa13.72□□□□□ -0.21
SDC2-201ENST00000302190 ZUFSPQ96AP4 578 aa13.72□□□□□ -0.21
SDC2-201ENST00000302190 SLCO4A1Q96BD0 722 aa13.72□□□□□ -0.21
SDC2-201ENST00000302190 COG8Q96MW5 612 aa13.72□□□□□ -0.21
SDC2-201ENST00000302190 TLR9Q9NR96 1032 aa13.72□□□□□ -0.21
SDC2-201ENST00000302190 AASDHPPTQ9NRN7 309 aa13.72□□□□□ -0.21
SDC2-201ENST00000302190 PSME2Q9UL46 239 aa13.72□□□□□ -0.21
SDC2-201ENST00000302190 TMCC3Q9ULS5 477 aa13.72□□□□□ -0.21
SDC2-201ENST00000302190 SPTBN5Q9NRC6 3674 aaKnown RBP13.72□□□□□ -0.21
SDC2-201ENST00000302190 A0A0G2JN53 185 aa13.72□□□□□ -0.21
SDC2-201ENST00000302190 SUV39H1O43463 412 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms