RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 SPDYE1Q8NFV5 336 aaPredicted RBP21.66■■□□□ 1.06
SMAD1-201ENST00000302085 ROPN1LQ96C74 230 aa21.66■■□□□ 1.06
SMAD1-201ENST00000302085 SPDL1Q96EA4 605 aa21.66■■□□□ 1.06
SMAD1-201ENST00000302085 MED8Q96G25 268 aa21.66■■□□□ 1.06
SMAD1-201ENST00000302085 LRCH3Q96II8 777 aa21.66■■□□□ 1.06
SMAD1-201ENST00000302085 SLC17A9Q9BYT1 436 aa21.66■■□□□ 1.06
SMAD1-201ENST00000302085 ACPTQ9BZG2 426 aa21.66■■□□□ 1.06
SMAD1-201ENST00000302085 ACTL8Q9H568 366 aa21.66■■□□□ 1.06
SMAD1-201ENST00000302085 TMEM45AQ9NWC5 275 aa21.66■■□□□ 1.06
SMAD1-201ENST00000302085 ADA2Q9NZK5 511 aa21.66■■□□□ 1.06
SMAD1-201ENST00000302085 NOP53Q9NZM5 478 aaKnown RBP21.66■■□□□ 1.06
SMAD1-201ENST00000302085 SNX6Q9UNH7 406 aa21.66■■□□□ 1.06
SMAD1-201ENST00000302085 ANKRD28O15084 1053 aa21.65■■□□□ 1.06
SMAD1-201ENST00000302085 MSX2P35548 267 aaPredicted RBP21.65■■□□□ 1.06
SMAD1-201ENST00000302085 POLR2JP52435 117 aaKnown RBP21.65■■□□□ 1.06
SMAD1-201ENST00000302085 ADPRHP54922 357 aa21.65■■□□□ 1.06
SMAD1-201ENST00000302085 RCAN2Q14206 197 aa21.65■■□□□ 1.06
SMAD1-201ENST00000302085 CCDC6Q16204 474 aa21.65■■□□□ 1.06
SMAD1-201ENST00000302085 SMU1Q2TAY7 513 aa21.65■■□□□ 1.06
SMAD1-201ENST00000302085 KIAA1161Q6NSJ0 714 aa21.65■■□□□ 1.06
SMAD1-201ENST00000302085 ZNF480Q8WV37 535 aa21.65■■□□□ 1.06
SMAD1-201ENST00000302085 SELENOMQ8WWX9 145 aa21.65■■□□□ 1.06
SMAD1-201ENST00000302085 DNASE1L2Q92874 299 aa21.65■■□□□ 1.06
SMAD1-201ENST00000302085 WDR26Q9H7D7 661 aa21.65■■□□□ 1.06
SMAD1-201ENST00000302085 LRTM1Q9HBL6 345 aa21.65■■□□□ 1.06
SMAD1-201ENST00000302085 STX18Q9P2W9 335 aaKnown RBP21.65■■□□□ 1.06
SMAD1-201ENST00000302085 POLR3HQ9Y535 204 aaPredicted RBP21.65■■□□□ 1.06
SMAD1-201ENST00000302085 A0A1W2PP18 115 aa21.65■■□□□ 1.06
SMAD1-201ENST00000302085 FAM234BA2RU67 622 aa21.65■■□□□ 1.06
SMAD1-201ENST00000302085 ASPDHA6ND91 283 aa21.65■■□□□ 1.06
SMAD1-201ENST00000302085 SHISA7A6NL88 538 aa21.65■■□□□ 1.06
SMAD1-201ENST00000302085 ANGPT2O15123 496 aa21.65■■□□□ 1.06
SMAD1-201ENST00000302085 ANP32DO95626 131 aa21.65■■□□□ 1.06
SMAD1-201ENST00000302085 JUPP14923 745 aa21.65■■□□□ 1.06
SMAD1-201ENST00000302085 CD22P20273 847 aa21.65■■□□□ 1.06
SMAD1-201ENST00000302085 ME2P23368 584 aa21.65■■□□□ 1.06
SMAD1-201ENST00000302085 KCNK10P57789 538 aa21.65■■□□□ 1.06
SMAD1-201ENST00000302085 RPL38P63173 70 aaKnown RBP21.65■■□□□ 1.06
SMAD1-201ENST00000302085 MS4A2Q01362 244 aa21.65■■□□□ 1.06
SMAD1-201ENST00000302085 IRF8Q02556 426 aa21.65■■□□□ 1.06
SMAD1-201ENST00000302085 IMPG1Q17R60 797 aa21.65■■□□□ 1.06
SMAD1-201ENST00000302085 VPS33AQ96AX1 596 aa21.65■■□□□ 1.06
SMAD1-201ENST00000302085 GPATCH1Q9BRR8 931 aaKnown RBP21.65■■□□□ 1.06
SMAD1-201ENST00000302085 ELOVL6Q9H5J4 265 aa21.65■■□□□ 1.06
SMAD1-201ENST00000302085 XIRP2A4UGR9 3374 aa21.64■■□□□ 1.06
SMAD1-201ENST00000302085 NUMA1Q14980 2115 aa21.64■■□□□ 1.05
SMAD1-201ENST00000302085 MBTPS2O43462 519 aa21.64■■□□□ 1.05
SMAD1-201ENST00000302085 SEC22BO75396 215 aa21.64■■□□□ 1.05
SMAD1-201ENST00000302085 FUCA1P04066 466 aa21.64■■□□□ 1.05
SMAD1-201ENST00000302085 ASGR2P07307 311 aa21.64■■□□□ 1.05
SMAD1-201ENST00000302085 COQ5Q5HYK3 327 aa21.64■■□□□ 1.05
SMAD1-201ENST00000302085 HABP4Q5JVS0 413 aaKnown RBP21.64■■□□□ 1.05
SMAD1-201ENST00000302085 OXR1Q8N573 874 aa21.64■■□□□ 1.05
SMAD1-201ENST00000302085 OR9A1PQ8NGU1 263 aa21.64■■□□□ 1.05
SMAD1-201ENST00000302085 SIPA1Q96FS4 1042 aa21.64■■□□□ 1.05
SMAD1-201ENST00000302085 SLC39A3Q9BRY0 314 aa21.64■■□□□ 1.05
SMAD1-201ENST00000302085 DNMT3AQ9Y6K1 912 aaPredicted RBP21.64■■□□□ 1.05
SMAD1-201ENST00000302085 TMEM265A0A087WTH1 108 aa21.63■■□□□ 1.05
SMAD1-201ENST00000302085 TBC1D3DA0A087WVF3 549 aa21.63■■□□□ 1.05
SMAD1-201ENST00000302085 TBC1D3IA0A087WXS9 549 aa21.63■■□□□ 1.05
SMAD1-201ENST00000302085 TBC1D3EA0A087X179 549 aa21.63■■□□□ 1.05
SMAD1-201ENST00000302085 TBC1D3KA0A087X1G2 549 aa21.63■■□□□ 1.05
SMAD1-201ENST00000302085 TBC1D3FA6NER0 549 aaPredicted RBP21.63■■□□□ 1.05
SMAD1-201ENST00000302085 TBC1D3LB9A6J9 549 aa21.63■■□□□ 1.05
SMAD1-201ENST00000302085 E7EQ34 232 aa21.63■■□□□ 1.05
SMAD1-201ENST00000302085 NARSO43776 548 aaKnown RBP21.63■■□□□ 1.05
SMAD1-201ENST00000302085 UGDHO60701 494 aa21.63■■□□□ 1.05
SMAD1-201ENST00000302085 TBC1D3HP0C7X1 549 aa21.63■■□□□ 1.05
SMAD1-201ENST00000302085 SLC34A1Q06495 639 aa21.63■■□□□ 1.05
SMAD1-201ENST00000302085 PCDH1Q08174 1060 aa21.63■■□□□ 1.05
SMAD1-201ENST00000302085 RPA4Q13156 261 aa21.63■■□□□ 1.05
SMAD1-201ENST00000302085 DOC2AQ14183 400 aa21.63■■□□□ 1.05
SMAD1-201ENST00000302085 TLR1Q15399 786 aa21.63■■□□□ 1.05
SMAD1-201ENST00000302085 XKR6Q5GH73 641 aa21.63■■□□□ 1.05
SMAD1-201ENST00000302085 LIPJQ5W064 366 aa21.63■■□□□ 1.05
SMAD1-201ENST00000302085 TBC1D3GQ6DHY5 549 aa21.63■■□□□ 1.05
SMAD1-201ENST00000302085 TBC1D3CQ6IPX1 549 aa21.63■■□□□ 1.05
SMAD1-201ENST00000302085 HORMAD1Q86X24 394 aa21.63■■□□□ 1.05
SMAD1-201ENST00000302085 ZFAND4Q86XD8 727 aa21.63■■□□□ 1.05
SMAD1-201ENST00000302085 TBC1D3Q8IZP1 549 aaPredicted RBP21.63■■□□□ 1.05
SMAD1-201ENST00000302085 LMNTD1Q8N9Z9 388 aa21.63■■□□□ 1.05
SMAD1-201ENST00000302085 PHC3Q8NDX5 983 aa21.63■■□□□ 1.05
SMAD1-201ENST00000302085 HIPK4Q8NE63 616 aa21.63■■□□□ 1.05
SMAD1-201ENST00000302085 NUDT8Q8WV74 236 aa21.63■■□□□ 1.05
SMAD1-201ENST00000302085 MAGEB10Q96LZ2 347 aaPredicted RBP21.63■■□□□ 1.05
SMAD1-201ENST00000302085 IL1RL2Q9HB29 575 aa21.63■■□□□ 1.05
SMAD1-201ENST00000302085 S100A14Q9HCY8 104 aa21.63■■□□□ 1.05
SMAD1-201ENST00000302085 C1orf109Q9NX04 203 aa21.63■■□□□ 1.05
SMAD1-201ENST00000302085 TMEM181Q9P2C4 612 aa21.63■■□□□ 1.05
SMAD1-201ENST00000302085 EIF3LQ9Y262 564 aaKnown RBP21.63■■□□□ 1.05
SMAD1-201ENST00000302085 TRIM38O00635 465 aa21.63■■□□□ 1.05
SMAD1-201ENST00000302085 FKBP6O75344 327 aa21.63■■□□□ 1.05
SMAD1-201ENST00000302085 RSL1D1O76021 490 aaKnown RBP21.63■■□□□ 1.05
SMAD1-201ENST00000302085 MAT2AP31153 395 aaKnown RBP21.63■■□□□ 1.05
SMAD1-201ENST00000302085 KIAA0040Q15053 153 aa21.63■■□□□ 1.05
SMAD1-201ENST00000302085 FRG2Q64ET8 278 aa21.63■■□□□ 1.05
SMAD1-201ENST00000302085 AAGABQ6PD74 315 aa21.63■■□□□ 1.05
SMAD1-201ENST00000302085 PDZD3Q86UT5 571 aa21.63■■□□□ 1.05
SMAD1-201ENST00000302085 FRG2BQ96QU4 278 aa21.63■■□□□ 1.05
SMAD1-201ENST00000302085 SPAG4Q9NPE6 437 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms