RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 TSR3Q9UJK0 312 aaKnown RBP11.73□□□□□ -0.53
HMGB2-201ENST00000296503 NOVA2Q9UNW9 492 aaKnown RBP11.73□□□□□ -0.53
HMGB2-201ENST00000296503 ESYT3A0FGR9 886 aa11.72□□□□□ -0.53
HMGB2-201ENST00000296503 B4E171 279 aa11.72□□□□□ -0.53
HMGB2-201ENST00000296503 C9orf172C9J069 976 aa11.72□□□□□ -0.53
HMGB2-201ENST00000296503 TP73O15350 636 aa11.72□□□□□ -0.53
HMGB2-201ENST00000296503 RPN2P04844 631 aa11.72□□□□□ -0.53
HMGB2-201ENST00000296503 ANKRD34CP0C6C1 535 aa11.72□□□□□ -0.53
HMGB2-201ENST00000296503 TSPAN7P41732 249 aa11.72□□□□□ -0.53
HMGB2-201ENST00000296503 SKIV2L2P42285 1042 aaKnown RBP11.72□□□□□ -0.53
HMGB2-201ENST00000296503 PLTPP55058 493 aa11.72□□□□□ -0.53
HMGB2-201ENST00000296503 MC2RQ01718 297 aa11.72□□□□□ -0.53
HMGB2-201ENST00000296503 CNSTQ6PJW8 725 aa11.72□□□□□ -0.53
HMGB2-201ENST00000296503 C19orf48Q6RUI8 117 aa11.72□□□□□ -0.53
HMGB2-201ENST00000296503 PALM2Q8IXS6 379 aa11.72□□□□□ -0.53
HMGB2-201ENST00000296503 ZBED8Q8IZ13 594 aa11.72□□□□□ -0.53
HMGB2-201ENST00000296503 ZBTB2Q8N680 514 aa11.72□□□□□ -0.53
HMGB2-201ENST00000296503 FOPNLQ96NB1 174 aa11.72□□□□□ -0.53
HMGB2-201ENST00000296503 CTRCQ99895 268 aa11.72□□□□□ -0.53
HMGB2-201ENST00000296503 ASPSCR1Q9BZE9 553 aa11.72□□□□□ -0.53
HMGB2-201ENST00000296503 STMN4Q9H169 189 aaPredicted RBP11.72□□□□□ -0.53
HMGB2-201ENST00000296503 CTNNAL1Q9UBT7 734 aa11.72□□□□□ -0.53
HMGB2-201ENST00000296503 PLAGL1Q9UM63 463 aa11.72□□□□□ -0.53
HMGB2-201ENST00000296503 ANKRD11Q6UB99 2663 aaPredicted RBP11.72□□□□□ -0.53
HMGB2-201ENST00000296503 IGHV5-51A0A0C4DH38 117 aa11.72□□□□□ -0.53
HMGB2-201ENST00000296503 MATN2O00339 956 aa11.72□□□□□ -0.53
HMGB2-201ENST00000296503 BTN3A3O00478 584 aa11.72□□□□□ -0.53
HMGB2-201ENST00000296503 POLR1CO15160 346 aaPredicted RBP11.72□□□□□ -0.53
HMGB2-201ENST00000296503 KLK10O43240 276 aa11.72□□□□□ -0.53
HMGB2-201ENST00000296503 ANP32DO95626 131 aa11.72□□□□□ -0.53
HMGB2-201ENST00000296503 CDH3P22223 829 aa11.72□□□□□ -0.53
HMGB2-201ENST00000296503 ITPKBP27987 946 aa11.72□□□□□ -0.53
HMGB2-201ENST00000296503 SHMT2P34897 504 aa11.72□□□□□ -0.53
HMGB2-201ENST00000296503 RAB15P59190 212 aa11.72□□□□□ -0.53
HMGB2-201ENST00000296503 MAGOHP61326 146 aaKnown RBP11.72□□□□□ -0.53
HMGB2-201ENST00000296503 NAA25Q14CX7 972 aa11.72□□□□□ -0.53
HMGB2-201ENST00000296503 GALNTL6Q49A17 601 aa11.72□□□□□ -0.53
HMGB2-201ENST00000296503 TNFAIP8L3Q5GJ75 292 aa11.72□□□□□ -0.53
HMGB2-201ENST00000296503 ANKS6Q68DC2 871 aa11.72□□□□□ -0.53
HMGB2-201ENST00000296503 UNC5DQ6UXZ4 953 aa11.72□□□□□ -0.53
HMGB2-201ENST00000296503 TRPM8Q7Z2W7 1104 aa11.72□□□□□ -0.53
HMGB2-201ENST00000296503 PRSS42Q7Z5A4 293 aa11.72□□□□□ -0.53
HMGB2-201ENST00000296503 ZFAND4Q86XD8 727 aa11.72□□□□□ -0.53
HMGB2-201ENST00000296503 SIDT2Q8NBJ9 832 aaKnown RBP11.72□□□□□ -0.53
HMGB2-201ENST00000296503 C2CD4AQ8NCU7 369 aaPredicted RBP11.72□□□□□ -0.53
HMGB2-201ENST00000296503 PYROXD1Q8WU10 500 aa11.72□□□□□ -0.53
HMGB2-201ENST00000296503 KLHL6Q8WZ60 621 aa11.72□□□□□ -0.53
HMGB2-201ENST00000296503 CD180Q99467 661 aa11.72□□□□□ -0.53
HMGB2-201ENST00000296503 ZNF768Q9H5H4 540 aaKnown RBP11.72□□□□□ -0.53
HMGB2-201ENST00000296503 SAYSD1Q9NPB0 183 aa11.72□□□□□ -0.53
HMGB2-201ENST00000296503 FBXO8Q9NRD0 319 aa11.72□□□□□ -0.53
HMGB2-201ENST00000296503 LATS2Q9NRM7 1088 aa11.72□□□□□ -0.53
HMGB2-201ENST00000296503 FOXJ2Q9P0K8 574 aa11.72□□□□□ -0.53
HMGB2-201ENST00000296503 CIDEBQ9UHD4 219 aa11.72□□□□□ -0.53
HMGB2-201ENST00000296503 PCDHB11Q9Y5F2 797 aa11.72□□□□□ -0.53
HMGB2-201ENST00000296503 B3GALT1Q9Y5Z6 326 aa11.72□□□□□ -0.53
HMGB2-201ENST00000296503 COMMD10Q9Y6G5 202 aa11.72□□□□□ -0.53
HMGB2-201ENST00000296503 USP24Q9UPU5 2620 aa11.71□□□□□ -0.53
HMGB2-201ENST00000296503 DMXL2Q8TDJ6 3036 aa11.71□□□□□ -0.53
HMGB2-201ENST00000296503 A0A087WV48 116 aa11.71□□□□□ -0.53
HMGB2-201ENST00000296503 TLCD2A6NGC4 264 aa11.71□□□□□ -0.53
HMGB2-201ENST00000296503 E7ESA3 106 aa11.71□□□□□ -0.53
HMGB2-201ENST00000296503 BTN3A1O00481 513 aa11.71□□□□□ -0.53
HMGB2-201ENST00000296503 SMNDC1O75940 238 aaKnown RBP eCLIP11.71□□□□□ -0.531e-6■■■■□ 21.6
HMGB2-201ENST00000296503 AHSGP02765 367 aa11.71□□□□□ -0.53
HMGB2-201ENST00000296503 NELFEP18615 380 aaKnown RBP11.71□□□□□ -0.53
HMGB2-201ENST00000296503 PRDX3P30048 256 aaKnown RBP11.71□□□□□ -0.53
HMGB2-201ENST00000296503 KPNA2P52292 529 aaKnown RBP11.71□□□□□ -0.53
HMGB2-201ENST00000296503 SH3BP2P78314 561 aa11.71□□□□□ -0.53
HMGB2-201ENST00000296503 CAV1Q03135 178 aa11.71□□□□□ -0.53
HMGB2-201ENST00000296503 BLMHQ13867 455 aa11.71□□□□□ -0.53
HMGB2-201ENST00000296503 FASTKD3Q14CZ7 662 aaKnown RBP11.71□□□□□ -0.53
HMGB2-201ENST00000296503 TTLL9Q3SXZ7 439 aa11.71□□□□□ -0.53
HMGB2-201ENST00000296503 TEDDM1Q5T9Z0 273 aa11.71□□□□□ -0.53
HMGB2-201ENST00000296503 ZNF549Q6P9A3 640 aa11.71□□□□□ -0.53
HMGB2-201ENST00000296503 TRMT10BQ6PF06 316 aaKnown RBP11.71□□□□□ -0.53
HMGB2-201ENST00000296503 CEACAM20Q6UY09 585 aa11.71□□□□□ -0.53
HMGB2-201ENST00000296503 ADGRF3Q8IZF5 1079 aa11.71□□□□□ -0.53
HMGB2-201ENST00000296503 BMPERQ8N8U9 685 aa11.71□□□□□ -0.53
HMGB2-201ENST00000296503 OR6C1Q96RD1 312 aa11.71□□□□□ -0.53
HMGB2-201ENST00000296503 DPH1Q9BZG8 443 aa11.71□□□□□ -0.53
HMGB2-201ENST00000296503 B3GNT4Q9C0J1 378 aa11.71□□□□□ -0.53
HMGB2-201ENST00000296503 APMAPQ9HDC9 416 aa11.71□□□□□ -0.53
HMGB2-201ENST00000296503 GRHL1Q9NZI5 618 aa11.71□□□□□ -0.53
HMGB2-201ENST00000296503 SLC39A10Q9ULF5 831 aa11.71□□□□□ -0.53
HMGB2-201ENST00000296503 ICKQ9UPZ9 632 aa11.71□□□□□ -0.53
HMGB2-201ENST00000296503 PCDHGA3Q9Y5H0 932 aa11.71□□□□□ -0.53
HMGB2-201ENST00000296503 PIPSLA2A3N6 862 aa11.7□□□□□ -0.54
HMGB2-201ENST00000296503 A6NHS1 94 aa11.7□□□□□ -0.54
HMGB2-201ENST00000296503 C2orf74A8MZ97 194 aa11.7□□□□□ -0.54
HMGB2-201ENST00000296503 VPS26AO75436 327 aa11.7□□□□□ -0.54
HMGB2-201ENST00000296503 FESP07332 822 aa11.7□□□□□ -0.54
HMGB2-201ENST00000296503 NQO1P15559 274 aaKnown RBP11.7□□□□□ -0.54
HMGB2-201ENST00000296503 ABCG1P45844 678 aa11.7□□□□□ -0.54
HMGB2-201ENST00000296503 TRADDQ15628 312 aa11.7□□□□□ -0.54
HMGB2-201ENST00000296503 KLHL38Q2WGJ6 581 aa11.7□□□□□ -0.54
HMGB2-201ENST00000296503 ACSBG2Q5FVE4 666 aa11.7□□□□□ -0.54
HMGB2-201ENST00000296503 BROXQ5VW32 411 aa11.7□□□□□ -0.54
HMGB2-201ENST00000296503 STEAP4Q687X5 459 aa11.7□□□□□ -0.54
HMGB2-201ENST00000296503 CAPN12Q6ZSI9 719 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms