RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 HIST1H2AHQ96KK5 128 aa17.29■□□□□ 0.36
CCDC78-201ENST00000293889 PKP4Q99569 1192 aa17.29■□□□□ 0.36
CCDC78-201ENST00000293889 HIST1H2AJQ99878 128 aa17.29■□□□□ 0.36
CCDC78-201ENST00000293889 H2AFJQ9BTM1 129 aa17.29■□□□□ 0.36
CCDC78-201ENST00000293889 GTPBP2Q9BX10 602 aaKnown RBP17.29■□□□□ 0.36
CCDC78-201ENST00000293889 MVB12BQ9H7P6 319 aa17.29■□□□□ 0.36
CCDC78-201ENST00000293889 OXSMQ9NWU1 459 aa17.29■□□□□ 0.36
CCDC78-201ENST00000293889 TDRKHQ9Y2W6 561 aaKnown RBP17.29■□□□□ 0.36
CCDC78-201ENST00000293889 HEBP2Q9Y5Z4 205 aa17.29■□□□□ 0.36
CCDC78-201ENST00000293889 KIR2DS5A0A0G2JLQ3 304 aa17.28■□□□□ 0.36
CCDC78-201ENST00000293889 A0A0G2JNG1 304 aa17.28■□□□□ 0.36
CCDC78-201ENST00000293889 OR5K4A6NMS3 321 aa17.28■□□□□ 0.36
CCDC78-201ENST00000293889 KIR2DS3K7RE56 304 aa17.28■□□□□ 0.36
CCDC78-201ENST00000293889 CDX4O14627 284 aaPredicted RBP17.28■□□□□ 0.36
CCDC78-201ENST00000293889 BIRC5O15392 142 aa17.28■□□□□ 0.36
CCDC78-201ENST00000293889 EDF1O60869 148 aaKnown RBP17.28■□□□□ 0.36
CCDC78-201ENST00000293889 CER1O95813 267 aa17.28■□□□□ 0.36
CCDC78-201ENST00000293889 AP1S2P56377 157 aa17.28■□□□□ 0.36
CCDC78-201ENST00000293889 CDKL1Q00532 357 aa17.28■□□□□ 0.36
CCDC78-201ENST00000293889 GRB7Q14451 532 aa17.28■□□□□ 0.36
CCDC78-201ENST00000293889 KRT33BQ14525 404 aa17.28■□□□□ 0.36
CCDC78-201ENST00000293889 KIR2DS5Q14953 304 aa17.28■□□□□ 0.36
CCDC78-201ENST00000293889 PFKFB4Q16877 469 aa17.28■□□□□ 0.36
CCDC78-201ENST00000293889 AASDHQ4L235 1098 aaPredicted RBP17.28■□□□□ 0.36
CCDC78-201ENST00000293889 TTC23LQ6PF05 361 aa17.28■□□□□ 0.36
CCDC78-201ENST00000293889 KANSL1Q7Z3B3 1105 aa17.28■□□□□ 0.36
CCDC78-201ENST00000293889 NUDCD3Q8IVD9 361 aa17.28■□□□□ 0.36
CCDC78-201ENST00000293889 SFRP1Q8N474 314 aa17.28■□□□□ 0.36
CCDC78-201ENST00000293889 FBXO39Q8N4B4 442 aa17.28■□□□□ 0.36
CCDC78-201ENST00000293889 MINDY1Q8N5J2 469 aa17.28■□□□□ 0.36
CCDC78-201ENST00000293889 PTGR2Q8N8N7 351 aaPredicted RBP17.28■□□□□ 0.36
CCDC78-201ENST00000293889 PDPRQ8NCN5 879 aa17.28■□□□□ 0.36
CCDC78-201ENST00000293889 SAP25Q8TEE9 199 aa17.28■□□□□ 0.36
CCDC78-201ENST00000293889 CXorf40BQ96DE9 158 aa17.28■□□□□ 0.36
CCDC78-201ENST00000293889 EGFL8Q99944 293 aa17.28■□□□□ 0.36
CCDC78-201ENST00000293889 HGH1Q9BTY7 390 aa17.28■□□□□ 0.36
CCDC78-201ENST00000293889 EDEM2Q9BV94 578 aa17.28■□□□□ 0.36
CCDC78-201ENST00000293889 USH1CQ9Y6N9 552 aa17.28■□□□□ 0.36
CCDC78-201ENST00000293889 ASCC3Q8N3C0 2202 aaKnown RBP17.27■□□□□ 0.36
CCDC78-201ENST00000293889 PABPN1LA6NDY0 278 aaKnown RBP17.27■□□□□ 0.36
CCDC78-201ENST00000293889 YKT6O15498 198 aa17.27■□□□□ 0.36
CCDC78-201ENST00000293889 WFS1O76024 890 aa17.27■□□□□ 0.36
CCDC78-201ENST00000293889 S100BP04271 92 aaPredicted RBP17.27■□□□□ 0.36
CCDC78-201ENST00000293889 GIMD1P0DJR0 217 aa17.27■□□□□ 0.36
CCDC78-201ENST00000293889 SLC2A4P14672 509 aa17.27■□□□□ 0.36
CCDC78-201ENST00000293889 NFKB2Q00653 900 aa17.27■□□□□ 0.36
CCDC78-201ENST00000293889 C18orf21Q32NC0 220 aaPredicted RBP17.27■□□□□ 0.36
CCDC78-201ENST00000293889 FBXO48Q5FWF7 155 aa17.27■□□□□ 0.36
CCDC78-201ENST00000293889 CDKL4Q5MAI5 379 aa17.27■□□□□ 0.36
CCDC78-201ENST00000293889 SULT1C3Q6IMI6 304 aa17.27■□□□□ 0.36
CCDC78-201ENST00000293889 GATAD2AQ86YP4 633 aa17.27■□□□□ 0.36
CCDC78-201ENST00000293889 OR9A1PQ8NGU1 263 aa17.27■□□□□ 0.36
CCDC78-201ENST00000293889 SLC37A2Q8TED4 501 aa17.27■□□□□ 0.36
CCDC78-201ENST00000293889 RAD51AP1Q96B01 352 aa17.27■□□□□ 0.36
CCDC78-201ENST00000293889 RHBDF1Q96CC6 855 aa17.27■□□□□ 0.36
CCDC78-201ENST00000293889 CCDC138Q96M89 665 aa17.27■□□□□ 0.36
CCDC78-201ENST00000293889 CAMK1GQ96NX5 476 aa17.27■□□□□ 0.36
CCDC78-201ENST00000293889 NCKIPSDQ9NZQ3 722 aa17.27■□□□□ 0.36
CCDC78-201ENST00000293889 PTBP2Q9UKA9 531 aaKnown RBP17.27■□□□□ 0.36
CCDC78-201ENST00000293889 TMCO1Q9UM00 188 aa17.27■□□□□ 0.36
CCDC78-201ENST00000293889 PLAGL1Q9UM63 463 aa17.27■□□□□ 0.36
CCDC78-201ENST00000293889 COLEC10Q9Y6Z7 277 aa17.27■□□□□ 0.36
CCDC78-201ENST00000293889 TAPBPO15533 448 aa17.26■□□□□ 0.35
CCDC78-201ENST00000293889 IPO13O94829 963 aaKnown RBP17.26■□□□□ 0.35
CCDC78-201ENST00000293889 UNC5CO95185 931 aa17.26■□□□□ 0.35
CCDC78-201ENST00000293889 ANXA5P08758 320 aa17.26■□□□□ 0.35
CCDC78-201ENST00000293889 XRCC1P18887 633 aaPredicted RBP17.26■□□□□ 0.35
CCDC78-201ENST00000293889 AGTR2P50052 363 aa17.26■□□□□ 0.35
CCDC78-201ENST00000293889 CCT8P50990 548 aa17.26■□□□□ 0.35
CCDC78-201ENST00000293889 PRKAA2P54646 552 aa17.26■□□□□ 0.35
CCDC78-201ENST00000293889 ALDH18A1P54886 795 aaKnown RBP17.26■□□□□ 0.35
CCDC78-201ENST00000293889 UBE2IP63279 158 aaKnown RBP17.26■□□□□ 0.35
CCDC78-201ENST00000293889 OGFOD3Q6PK18 319 aa17.26■□□□□ 0.35
CCDC78-201ENST00000293889 SLC22A9Q8IVM8 553 aa17.26■□□□□ 0.35
CCDC78-201ENST00000293889 TRIM48Q8IWZ4 208 aa17.26■□□□□ 0.35
CCDC78-201ENST00000293889 CCDC126Q96EE4 140 aa17.26■□□□□ 0.35
CCDC78-201ENST00000293889 NRTNQ99748 197 aa17.26■□□□□ 0.35
CCDC78-201ENST00000293889 ACSS2Q9NR19 701 aa17.26■□□□□ 0.35
CCDC78-201ENST00000293889 TXLNGQ9NUQ3 528 aa17.26■□□□□ 0.35
CCDC78-201ENST00000293889 SIRPGQ9P1W8 387 aa17.26■□□□□ 0.35
CCDC78-201ENST00000293889 CPNE7Q9UBL6 633 aa17.26■□□□□ 0.35
CCDC78-201ENST00000293889 POLG2Q9UHN1 485 aa17.26■□□□□ 0.35
CCDC78-201ENST00000293889 NOBOXO60393 691 aa17.25■□□□□ 0.35
CCDC78-201ENST00000293889 FOXD2O60548 495 aaPredicted RBP17.25■□□□□ 0.35
CCDC78-201ENST00000293889 SLC16A8O95907 504 aa17.25■□□□□ 0.35
CCDC78-201ENST00000293889 NDUFS1P28331 727 aa17.25■□□□□ 0.35
CCDC78-201ENST00000293889 DNAJB13P59910 316 aa17.25■□□□□ 0.35
CCDC78-201ENST00000293889 SETDB1Q15047 1291 aa17.25■□□□□ 0.35
CCDC78-201ENST00000293889 ZXDCQ2QGD7 858 aaPredicted RBP17.25■□□□□ 0.35
CCDC78-201ENST00000293889 LIPMQ5VYY2 423 aa17.25■□□□□ 0.35
CCDC78-201ENST00000293889 MAPK15Q8TD08 544 aa17.25■□□□□ 0.35
CCDC78-201ENST00000293889 ESAMQ96AP7 390 aa17.25■□□□□ 0.35
CCDC78-201ENST00000293889 FBXL8Q96CD0 374 aa17.25■□□□□ 0.35
CCDC78-201ENST00000293889 KLHL29Q96CT2 875 aa17.25■□□□□ 0.35
CCDC78-201ENST00000293889 TMEM237Q96Q45 408 aa17.25■□□□□ 0.35
CCDC78-201ENST00000293889 STOX2Q9P2F5 926 aaPredicted RBP17.25■□□□□ 0.35
CCDC78-201ENST00000293889 MCM8Q9UJA3 840 aa17.25■□□□□ 0.35
CCDC78-201ENST00000293889 LRRC14BA6NHZ5 514 aa17.25■□□□□ 0.35
CCDC78-201ENST00000293889 STX16-NPEPL1H3BU86 382 aa17.25■□□□□ 0.35
CCDC78-201ENST00000293889 STX16O14662 325 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms