RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 BIRC2Q13490 618 aa8.86□□□□□ -0.99
HMGN1-201ENST00000288344 IL11RAQ14626 422 aa8.86□□□□□ -0.99
HMGN1-201ENST00000288344 CYP2A13Q16696 494 aa8.86□□□□□ -0.99
HMGN1-201ENST00000288344 WHAMMP3Q1A5X7 153 aa8.86□□□□□ -0.99
HMGN1-201ENST00000288344 BBS9Q3SYG4 887 aa8.86□□□□□ -0.99
HMGN1-201ENST00000288344 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.86□□□□□ -0.99
HMGN1-201ENST00000288344 TBCELQ5QJ74 424 aa8.86□□□□□ -0.99
HMGN1-201ENST00000288344 HP1BP3Q5SSJ5 553 aaPredicted RBP8.86□□□□□ -0.99
HMGN1-201ENST00000288344 CACHD1Q5VU97 1274 aa8.86□□□□□ -0.99
HMGN1-201ENST00000288344 ANKS6Q68DC2 871 aa8.86□□□□□ -0.99
HMGN1-201ENST00000288344 PTRHD1Q6GMV3 140 aaKnown RBP8.86□□□□□ -0.99
HMGN1-201ENST00000288344 ZNF449Q6P9G9 518 aa8.86□□□□□ -0.99
HMGN1-201ENST00000288344 KLHL35Q6PF15 583 aa8.86□□□□□ -0.99
HMGN1-201ENST00000288344 FBXO38Q6PIJ6 1188 aa8.86□□□□□ -0.99
HMGN1-201ENST00000288344 PCSK4Q6UW60 755 aa8.86□□□□□ -0.99
HMGN1-201ENST00000288344 TMEM207Q6UWW9 146 aa8.86□□□□□ -0.99
HMGN1-201ENST00000288344 FAM92BQ6ZTR7 304 aa8.86□□□□□ -0.99
HMGN1-201ENST00000288344 KCNMB4Q86W47 210 aa8.86□□□□□ -0.99
HMGN1-201ENST00000288344 ZFAND4Q86XD8 727 aa8.86□□□□□ -0.99
HMGN1-201ENST00000288344 RELL1Q8IUW5 271 aa8.86□□□□□ -0.99
HMGN1-201ENST00000288344 LMNTD1Q8N9Z9 388 aa8.86□□□□□ -0.99
HMGN1-201ENST00000288344 FBXO25Q8TCJ0 367 aa8.86□□□□□ -0.99
HMGN1-201ENST00000288344 CD200R1Q8TD46 325 aa8.86□□□□□ -0.99
HMGN1-201ENST00000288344 CALML6Q8TD86 181 aa8.86□□□□□ -0.99
HMGN1-201ENST00000288344 LCN9Q8WX39 176 aa8.86□□□□□ -0.99
HMGN1-201ENST00000288344 NKD1Q969G9 470 aa8.86□□□□□ -0.99
HMGN1-201ENST00000288344 ZNF501Q96CX3 271 aaPredicted RBP8.86□□□□□ -0.99
HMGN1-201ENST00000288344 ITPKCQ96DU7 683 aa8.86□□□□□ -0.99
HMGN1-201ENST00000288344 FCRL4Q96PJ5 515 aa8.86□□□□□ -0.99
HMGN1-201ENST00000288344 TRAPPC9Q96Q05 1148 aa8.86□□□□□ -0.99
HMGN1-201ENST00000288344 TRIM31Q9BZY9 425 aa8.86□□□□□ -0.99
HMGN1-201ENST00000288344 XKR8Q9H6D3 395 aa8.86□□□□□ -0.99
HMGN1-201ENST00000288344 SYNDIG1Q9H7V2 258 aa8.86□□□□□ -0.99
HMGN1-201ENST00000288344 FAM60AQ9NP50 221 aa8.86□□□□□ -0.99
HMGN1-201ENST00000288344 IARS2Q9NSE4 1012 aaKnown RBP8.86□□□□□ -0.99
HMGN1-201ENST00000288344 ASF1AQ9Y294 204 aa8.86□□□□□ -0.99
HMGN1-201ENST00000288344 PSAT1Q9Y617 370 aa8.86□□□□□ -0.99
HMGN1-201ENST00000288344 SPENQ96T58 3664 aaKnown RBP8.86□□□□□ -0.99
HMGN1-201ENST00000288344 KRT87PA6NCN2 255 aa8.85□□□□□ -0.99
HMGN1-201ENST00000288344 A6NJY4 79 aa8.85□□□□□ -0.99
HMGN1-201ENST00000288344 CXorf49A8MYA2 514 aaPredicted RBP8.85□□□□□ -0.99
HMGN1-201ENST00000288344 F8W8V4 182 aa8.85□□□□□ -0.99
HMGN1-201ENST00000288344 MYO1CO00159 1063 aa8.85□□□□□ -0.99
HMGN1-201ENST00000288344 MATN2O00339 956 aa8.85□□□□□ -0.99
HMGN1-201ENST00000288344 ST8SIA5O15466 376 aa8.85□□□□□ -0.99
HMGN1-201ENST00000288344 URI1O94763 535 aaPredicted RBP8.85□□□□□ -0.99
HMGN1-201ENST00000288344 APOA4P06727 396 aa8.85□□□□□ -0.99
HMGN1-201ENST00000288344 CHRM5P08912 532 aaPredicted RBP8.85□□□□□ -0.99
HMGN1-201ENST00000288344 JMJD7P0C870 316 aa8.85□□□□□ -0.99
HMGN1-201ENST00000288344 ST6GAL1P15907 406 aa8.85□□□□□ -0.99
HMGN1-201ENST00000288344 PKLRP30613 574 aa8.85□□□□□ -0.99
HMGN1-201ENST00000288344 SKIV2L2P42285 1042 aaKnown RBP8.85□□□□□ -0.99
HMGN1-201ENST00000288344 MAPK9P45984 424 aa8.85□□□□□ -0.99
HMGN1-201ENST00000288344 PGGT1BP53609 377 aa8.85□□□□□ -0.99
HMGN1-201ENST00000288344 ARL4CP56559 192 aa8.85□□□□□ -0.99
HMGN1-201ENST00000288344 HSD11B2P80365 405 aa8.85□□□□□ -0.99
HMGN1-201ENST00000288344 PDIA2Q13087 525 aaKnown RBP8.85□□□□□ -0.99
HMGN1-201ENST00000288344 TUBB2AQ13885 445 aa8.85□□□□□ -0.99
HMGN1-201ENST00000288344 NAA30Q147X3 362 aaPredicted RBP8.85□□□□□ -0.99
HMGN1-201ENST00000288344 SNAP47Q5SQN1 464 aa8.85□□□□□ -0.99
HMGN1-201ENST00000288344 RBM20Q5T481 1227 aaKnown RBP8.85□□□□□ -0.99
HMGN1-201ENST00000288344 OTOAQ7RTW8 1153 aa8.85□□□□□ -0.99
HMGN1-201ENST00000288344 OOSP2Q86WS3 158 aa8.85□□□□□ -0.99
HMGN1-201ENST00000288344 SLC38A9Q8NBW4 561 aa8.85□□□□□ -0.99
HMGN1-201ENST00000288344 BBOF1Q8ND07 529 aa8.85□□□□□ -0.99
HMGN1-201ENST00000288344 FBXO36Q8NEA4 188 aa8.85□□□□□ -0.99
HMGN1-201ENST00000288344 OR2A1Q8NGT9 310 aa8.85□□□□□ -0.99
HMGN1-201ENST00000288344 HNRNPLLQ8WVV9 542 aaKnown RBP8.85□□□□□ -0.99
HMGN1-201ENST00000288344 INPP5DQ92835 1189 aa8.85□□□□□ -0.99
HMGN1-201ENST00000288344 PDLIM5Q96HC4 596 aaKnown RBP8.85□□□□□ -0.99
HMGN1-201ENST00000288344 TEFMQ96QE5 360 aaKnown RBP8.85□□□□□ -0.99
HMGN1-201ENST00000288344 ZPBPQ9BS86 351 aa8.85□□□□□ -0.99
HMGN1-201ENST00000288344 TUBB2BQ9BVA1 445 aa8.85□□□□□ -0.99
HMGN1-201ENST00000288344 FUT8Q9BYC5 575 aa8.85□□□□□ -0.99
HMGN1-201ENST00000288344 ASPSCR1Q9BZE9 553 aa8.85□□□□□ -0.99
HMGN1-201ENST00000288344 TRIT1Q9H3H1 467 aaKnown RBP8.85□□□□□ -0.99
HMGN1-201ENST00000288344 SRMSQ9H3Y6 488 aa8.85□□□□□ -0.99
HMGN1-201ENST00000288344 AKIRIN1Q9H9L7 192 aaPredicted RBP8.85□□□□□ -0.99
HMGN1-201ENST00000288344 LRRC4CQ9HCJ2 640 aa8.85□□□□□ -0.99
HMGN1-201ENST00000288344 SLC39A1Q9NY26 324 aa8.85□□□□□ -0.99
HMGN1-201ENST00000288344 ACTR10Q9NZ32 417 aa8.85□□□□□ -0.99
HMGN1-201ENST00000288344 ZC3H7BQ9UGR2 993 aaKnown RBP8.85□□□□□ -0.99
HMGN1-201ENST00000288344 KLHL3Q9UH77 587 aa8.85□□□□□ -0.99
HMGN1-201ENST00000288344 CHMP2BQ9UQN3 213 aa8.85□□□□□ -0.99
HMGN1-201ENST00000288344 RUVBL2Q9Y230 463 aaKnown RBP8.85□□□□□ -0.99
HMGN1-201ENST00000288344 COMMD10Q9Y6G5 202 aa8.85□□□□□ -0.99
HMGN1-201ENST00000288344 ANKRD12Q6UB98 2062 aa8.85□□□□□ -0.99
HMGN1-201ENST00000288344 UBA6A0AVT1 1052 aaPredicted RBP8.84□□□□□ -0.99
HMGN1-201ENST00000288344 SLC9B1P1A6NJY1 282 aa8.84□□□□□ -0.99
HMGN1-201ENST00000288344 ARHGEF33A8MVX0 844 aa8.84□□□□□ -0.99
HMGN1-201ENST00000288344 K7ENP7 123 aa8.84□□□□□ -0.99
HMGN1-201ENST00000288344 AGRPO00253 132 aa8.84□□□□□ -0.99
HMGN1-201ENST00000288344 EIF3FO00303 357 aaPredicted RBP8.84□□□□□ -0.99
HMGN1-201ENST00000288344 RASGRF2O14827 1237 aa8.84□□□□□ -0.99
HMGN1-201ENST00000288344 POLR1CO15160 346 aaPredicted RBP8.84□□□□□ -0.99
HMGN1-201ENST00000288344 SPAG6O75602 509 aa8.84□□□□□ -0.99
HMGN1-201ENST00000288344 ZBTB11O95625 1053 aaPredicted RBP8.84□□□□□ -0.99
HMGN1-201ENST00000288344 CTSBP07858 339 aa8.84□□□□□ -0.99
HMGN1-201ENST00000288344 MPC1LP0DKB6 136 aa8.84□□□□□ -0.99
HMGN1-201ENST00000288344 LIPCP11150 499 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms