RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 K7EPI3 171 aa18.35■□□□□ 0.53
PDLIM3-202ENST00000284770 KIR2DS3K7RE56 304 aa18.35■□□□□ 0.53
PDLIM3-202ENST00000284770 YY2O15391 372 aa18.35■□□□□ 0.53
PDLIM3-202ENST00000284770 CCNT2O60583 730 aaKnown RBP18.35■□□□□ 0.53
PDLIM3-202ENST00000284770 HSD17B2P37059 387 aa18.35■□□□□ 0.53
PDLIM3-202ENST00000284770 CLCQ05315 142 aa18.35■□□□□ 0.53
PDLIM3-202ENST00000284770 KIR2DS5Q14953 304 aa18.35■□□□□ 0.53
PDLIM3-202ENST00000284770 ARHGAP19Q14CB8 494 aa18.35■□□□□ 0.53
PDLIM3-202ENST00000284770 C6orf89Q6UWU4 347 aa18.35■□□□□ 0.53
PDLIM3-202ENST00000284770 ZNF771Q7L3S4 317 aaPredicted RBP18.35■□□□□ 0.53
PDLIM3-202ENST00000284770 ZNF781Q8N8C0 355 aa18.35■□□□□ 0.53
PDLIM3-202ENST00000284770 ZDHHC1Q8WTX9 485 aa18.35■□□□□ 0.53
PDLIM3-202ENST00000284770 MENTQ9BUN1 341 aa18.35■□□□□ 0.53
PDLIM3-202ENST00000284770 SLC32A1Q9H598 525 aa18.35■□□□□ 0.53
PDLIM3-202ENST00000284770 CAPN10Q9HC96 672 aa18.35■□□□□ 0.53
PDLIM3-202ENST00000284770 PNPOQ9NVS9 261 aa18.35■□□□□ 0.53
PDLIM3-202ENST00000284770 OPTCQ9UBM4 332 aa18.35■□□□□ 0.53
PDLIM3-202ENST00000284770 LNPEPQ9UIQ6 1025 aa18.35■□□□□ 0.53
PDLIM3-202ENST00000284770 DCTN4Q9UJW0 460 aa18.35■□□□□ 0.53
PDLIM3-202ENST00000284770 RAP2CQ9Y3L5 183 aa18.35■□□□□ 0.53
PDLIM3-202ENST00000284770 PRAMEF33A0A0G2JMD5 474 aa18.35■□□□□ 0.53
PDLIM3-202ENST00000284770 SDC3O75056 442 aa18.35■□□□□ 0.53
PDLIM3-202ENST00000284770 KITP10721 976 aa18.35■□□□□ 0.53
PDLIM3-202ENST00000284770 ERGP11308 486 aa18.35■□□□□ 0.53
PDLIM3-202ENST00000284770 PNLIPRP1P54315 467 aa18.35■□□□□ 0.53
PDLIM3-202ENST00000284770 GRIK2Q13002 908 aa18.35■□□□□ 0.53
PDLIM3-202ENST00000284770 ZNF423Q2M1K9 1284 aa18.35■□□□□ 0.53
PDLIM3-202ENST00000284770 SLC23A3Q6PIS1 610 aa18.35■□□□□ 0.53
PDLIM3-202ENST00000284770 LRRC70Q7Z2Q7 622 aa18.35■□□□□ 0.53
PDLIM3-202ENST00000284770 SYTL1Q8IYJ3 562 aa18.35■□□□□ 0.53
PDLIM3-202ENST00000284770 SFRP1Q8N474 314 aa18.35■□□□□ 0.53
PDLIM3-202ENST00000284770 OR56A3Q8NH54 315 aa18.35■□□□□ 0.53
PDLIM3-202ENST00000284770 PYCR2Q96C36 320 aa18.35■□□□□ 0.53
PDLIM3-202ENST00000284770 KIR3DX1Q9H7L2 352 aa18.35■□□□□ 0.53
PDLIM3-202ENST00000284770 EML4Q9HC35 981 aaKnown RBP18.35■□□□□ 0.53
PDLIM3-202ENST00000284770 ZBTB26Q9HCK0 441 aa18.35■□□□□ 0.53
PDLIM3-202ENST00000284770 UCKL1Q9NWZ5 548 aa18.35■□□□□ 0.53
PDLIM3-202ENST00000284770 SPATA7Q9P0W8 599 aa18.35■□□□□ 0.53
PDLIM3-202ENST00000284770 PLAGL1Q9UM63 463 aa18.35■□□□□ 0.53
PDLIM3-202ENST00000284770 SLC6A14Q9UN76 642 aa18.35■□□□□ 0.53
PDLIM3-202ENST00000284770 FANCMQ8IYD8 2048 aa18.34■□□□□ 0.53
PDLIM3-202ENST00000284770 E7ENX8 843 aa18.34■□□□□ 0.53
PDLIM3-202ENST00000284770 EBAG9O00559 213 aa18.34■□□□□ 0.53
PDLIM3-202ENST00000284770 KDM1AO60341 852 aa18.34■□□□□ 0.53
PDLIM3-202ENST00000284770 TAP2Q03519 686 aa18.34■□□□□ 0.53
PDLIM3-202ENST00000284770 LCP2Q13094 533 aa18.34■□□□□ 0.53
PDLIM3-202ENST00000284770 NAE1Q13564 534 aa18.34■□□□□ 0.53
PDLIM3-202ENST00000284770 GTF2H2Q13888 395 aa18.34■□□□□ 0.53
PDLIM3-202ENST00000284770 SHBQ15464 509 aa18.34■□□□□ 0.53
PDLIM3-202ENST00000284770 GTF2H2CQ6P1K8 395 aa18.34■□□□□ 0.53
PDLIM3-202ENST00000284770 GOLGA7Q7Z5G4 137 aa18.34■□□□□ 0.53
PDLIM3-202ENST00000284770 KLHDC8AQ8IYD2 350 aa18.34■□□□□ 0.53
PDLIM3-202ENST00000284770 LRRC56Q8IYG6 542 aaPredicted RBP18.34■□□□□ 0.53
PDLIM3-202ENST00000284770 RAB42Q8N4Z0 105 aa18.34■□□□□ 0.53
PDLIM3-202ENST00000284770 TEX9Q8N6V9 391 aa18.34■□□□□ 0.53
PDLIM3-202ENST00000284770 OR52E1Q8NGJ3 308 aa18.34■□□□□ 0.53
PDLIM3-202ENST00000284770 TRPC4APQ8TEL6 797 aa18.34■□□□□ 0.53
PDLIM3-202ENST00000284770 ZFPM2Q8WW38 1151 aa18.34■□□□□ 0.53
PDLIM3-202ENST00000284770 PATE1Q8WXA2 126 aa18.34■□□□□ 0.53
PDLIM3-202ENST00000284770 IL17FQ96PD4 163 aa18.34■□□□□ 0.53
PDLIM3-202ENST00000284770 ILKAPQ9H0C8 392 aaPredicted RBP18.34■□□□□ 0.53
PDLIM3-202ENST00000284770 SLC40A1Q9NP59 571 aa18.34■□□□□ 0.53
PDLIM3-202ENST00000284770 SEMA4BQ9NPR2 832 aaPredicted RBP18.34■□□□□ 0.53
PDLIM3-202ENST00000284770 POT1Q9NUX5 634 aa18.34■□□□□ 0.53
PDLIM3-202ENST00000284770 SLC22A14Q9Y267 594 aa18.34■□□□□ 0.53
PDLIM3-202ENST00000284770 CSNK1G3Q9Y6M4 447 aa18.34■□□□□ 0.53
PDLIM3-202ENST00000284770 PATE3B3GLJ2 98 aa18.33■□□□□ 0.53
PDLIM3-202ENST00000284770 PPP6CO00743 305 aa18.33■□□□□ 0.53
PDLIM3-202ENST00000284770 UBFD1O14562 309 aaKnown RBP18.33■□□□□ 0.53
PDLIM3-202ENST00000284770 ZNF195O14628 629 aa18.33■□□□□ 0.53
PDLIM3-202ENST00000284770 DFNA5O60443 496 aa18.33■□□□□ 0.53
PDLIM3-202ENST00000284770 WDR47O94967 919 aa18.33■□□□□ 0.53
PDLIM3-202ENST00000284770 EPN2O95208 641 aa18.33■□□□□ 0.53
PDLIM3-202ENST00000284770 MLYCDO95822 493 aa18.33■□□□□ 0.53
PDLIM3-202ENST00000284770 ANXA6P08133 673 aa18.33■□□□□ 0.53
PDLIM3-202ENST00000284770 ALOX15P16050 662 aaPredicted RBP18.33■□□□□ 0.53
PDLIM3-202ENST00000284770 EPB42P16452 691 aa18.33■□□□□ 0.53
PDLIM3-202ENST00000284770 TSPAN8P19075 237 aa18.33■□□□□ 0.53
PDLIM3-202ENST00000284770 MPSTP25325 297 aa18.33■□□□□ 0.53
PDLIM3-202ENST00000284770 PIK3CGP48736 1102 aa18.33■□□□□ 0.53
PDLIM3-202ENST00000284770 BNIP3Q12983 259 aa18.33■□□□□ 0.53
PDLIM3-202ENST00000284770 PRKAA1Q13131 559 aa18.33■□□□□ 0.53
PDLIM3-202ENST00000284770 CYP2A13Q16696 494 aa18.33■□□□□ 0.53
PDLIM3-202ENST00000284770 HLA-BQ31612 363 aa18.33■□□□□ 0.53
PDLIM3-202ENST00000284770 TRIM61Q5EBN2 209 aa18.33■□□□□ 0.53
PDLIM3-202ENST00000284770 IL27RAQ6UWB1 636 aa18.33■□□□□ 0.53
PDLIM3-202ENST00000284770 SFTPA2Q8IWL1 248 aa18.33■□□□□ 0.53
PDLIM3-202ENST00000284770 TRIM48Q8IWZ4 208 aa18.33■□□□□ 0.53
PDLIM3-202ENST00000284770 PPFIBP2Q8ND30 876 aa18.33■□□□□ 0.53
PDLIM3-202ENST00000284770 SLC37A2Q8TED4 501 aa18.33■□□□□ 0.53
PDLIM3-202ENST00000284770 RAB11FIP5Q9BXF6 653 aa18.33■□□□□ 0.53
PDLIM3-202ENST00000284770 FSCN3Q9NQT6 498 aa18.33■□□□□ 0.53
PDLIM3-202ENST00000284770 INTS7Q9NVH2 962 aaKnown RBP18.33■□□□□ 0.53
PDLIM3-202ENST00000284770 KCNK4Q9NYG8 393 aa18.33■□□□□ 0.53
PDLIM3-202ENST00000284770 CPNE7Q9UBL6 633 aa18.33■□□□□ 0.53
PDLIM3-202ENST00000284770 ZDHHC2Q9UIJ5 367 aa18.33■□□□□ 0.53
PDLIM3-202ENST00000284770 RAB23Q9ULC3 237 aa18.33■□□□□ 0.53
PDLIM3-202ENST00000284770 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.33■□□□□ 0.53
PDLIM3-202ENST00000284770 ANGPTL3Q9Y5C1 460 aa18.33■□□□□ 0.53
PDLIM3-202ENST00000284770 PCDHGA5Q9Y5G8 931 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms